Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq168 122 2e-22
seq1 113 8e-20
seq773 104 4e-17
seq786 96.9 6e-15
seq931 95.1 2e-14
seq885 95.1 2e-14
seq235 89.7 9e-13
seq646 87.8 3e-12
seq219 87.8 3e-12
>seq168
Length=201391403
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
|| ||||| | |||| ||| || |||||| ||||| || || || | ||| ||
Sbjct 5653882 ACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATCTTCC 5653823
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| || || || ||||| || | |||||| ||||||||||| |||||||| ||||| |||
Sbjct 5653822 AGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGT 5653763
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
|| |||| |||| |||| || ||||| || | ||||| || || || || || ||
Sbjct 5653762 ATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTT 5653703
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|| || || ||||| || || || ||||||||
Sbjct 5653702 CCCGTAAGGGTTTTCACGAAAATCTGCATTTT 5653671
>seq1
Length=228908639
Score = 113 bits (124), Expect = 8e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
|| ||||| | |||| ||| || |||||| ||||| || || || | ||| ||
Sbjct 172116159 ACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATCTTCC 172116100
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| || || || ||||| || | |||||| ||||||||||| |||||||| ||||| ||
Sbjct 172116099 AGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 172116040
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
|| |||| |||| |||| || ||||| || | ||| | || || || || || ||
Sbjct 172116039 ATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAGCCTCGAGGGTGATGGTCTTC 172115980
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|| || || ||||| || || || ||||||||
Sbjct 172115979 CCCGTAAGGGTTTTCACGAAAATCTGCATTTT 172115948
>seq773
Length=81384781
Score = 104 bits (114), Expect = 4e-17
Identities = 143/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 193164 GTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCG 193223
|||| ||| || | |||| ||||| || || || | ||| || | || || ||
Sbjct 51769213 GTAGACTCCTTTTGACTATTGTAGTCAGACAAAGTACATCCATCTTCCAGCTGCTTGCCA 51769272
Query 193224 GCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTT 193283
||||| || | |||||| ||||||||||| |||||||| ||||| || || |||| |||
Sbjct 51769273 GCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTT 51769332
Query 193284 ATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTT 193343
| |||| || ||||| || | ||| | || || || || || || || || || |||
Sbjct 51769333 ACATTTTCTATCGTATCCGAGGGTTCAGCCTCGAGGGTGATGGTCTTCCCCGTAAGGGTT 51769392
Query 193344 TTTACAAATATTTGCATTTT 193363
|| || || || ||||||||
Sbjct 51769393 TTCACGAAAATCTGCATTTT 51769412
>seq786
Length=95888799
Score = 96.9 bits (106), Expect = 6e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||| | || || | || | ||| | |||| |||||| |||||| ||| | ||
Sbjct 10327976 ACCACCACGCAGTCTCAACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGCCAGA 10327917
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| || | ||| || | ||| || || ||||| || ||| || |||||||||||
Sbjct 10327916 CAAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGG 10327857
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|||||||| ||||| || || |||| |||| |||| || ||||| | | |||||
Sbjct 10327856 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCAATGGTTCAAC 10327797
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
| || || | || || || || || ||||| || || || ||||||||
Sbjct 10327796 CTTGAGGGTGGTTGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 10327746
>seq931
Length=156331669
Score = 95.1 bits (104), Expect = 2e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
|| ||||| | |||| ||| || ||| || |||| || || || | ||| ||
Sbjct 3273461 ACAAGATGAAGAGTAGGCTCCTTTTGAATGTTGCAGTCAGACAAAGTACGTCCATCTTCC 3273402
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| ||| || || ||||| || | ||| || ||||||||||| |||||||| ||||| |
Sbjct 3273401 AGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTAG 3273342
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
|| |||| |||| |||| || | ||| || | ||||| || || || || || ||
Sbjct 3273341 ATCTTGGCCTTTACATTTTCTATCGCATCTGAGGGTTCAACCTCAAGGGTGATGGTCTTC 3273282
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|| |||| ||||| || || || |||| |||
Sbjct 3273281 CCCCTTAGGGTTTTCACGAAAATCTGCAGTTT 3273250
>seq885
Length=63231202
Score = 95.1 bits (104), Expect = 2e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
|| ||||| | |||| ||| || ||| || ||||| || || | | ||| ||
Sbjct 17717367 ACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGCACATACATCCTCC 17717308
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| ||| || | ||||| || | ||| | ||||||||||| ||||||| ||||| ||
Sbjct 17717307 AGTTGCTTGCTAGCAAAGATCAGTCTTTACTGATCAGGAGGAATTCCTTACTTATCCTGG 17717248
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
| |||| ||||||||| || || || || | ||| | || || || || || ||
Sbjct 17717247 GTCTTGGCCTTTATATTTTCTATCGTTTCTGAGGGTTCAGCCTCGAGGGTGATGGTCTTC 17717188
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||||| || ||||| ||||| || ||||||||
Sbjct 17717187 CCTGTGAGGGTTTTCACAAAAATCTGCATTTT 17717156
>seq235
Length=173266796
Score = 89.7 bits (98), Expect = 9e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
|| ||||| | |||| || || |||| | ||||| || || || | ||| ||
Sbjct 115827902 ACAAGATGAAGAGTAGAATCCTTTTGAATACTGTAGTCAGACAAAGTACATCCATCTTCC 115827843
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| ||| ||||| ||||| || | ||| || ||||||||||| |||||||| ||||| ||
Sbjct 115827842 AGTTGCTTTCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 115827783
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
|| |||| |||| |||| || ||||| | | ||| | || || || || || ||
Sbjct 115827782 ATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGTTCAGCCTCGAGGGTGATGGTCTTC 115827723
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
| | || ||||| | || || ||||||||
Sbjct 115827722 TCCATAAGAGTTTTCATGAAAATCTGCATTTT 115827691
>seq646
Length=133456746
Score = 87.8 bits (96), Expect = 3e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| |||||||| | || || ||||| |||| |||| |||||| || || |||||
Sbjct 124982251 ATCCCACCTCTGAGACGGAGCACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAGTCA 124982310
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | ||| || | || ||||||||||| || || ||||| || ||||||
Sbjct 124982311 GACAGGGTGCGTCCATCTTCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCAGGA 124982370
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| || || | || | || || || || | |||
Sbjct 124982371 GGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACGTTCTCGATGGTGTCACTGGGCTCG 124982430
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
|| || || || || || ||||| || || || || || || || ||||||
Sbjct 124982431 ACCTCGAGGGTGATGGTCTTACCAGTCAGGGTCTTCACGAAGATCTGCATT 124982481
>seq219
Length=165317712
Score = 87.8 bits (96), Expect = 3e-12
Identities = 159/233 (68%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||||| || || |||||||||| || |||||| || || |||||
Sbjct 57062849 ATACCACCTCTCAGACGCAGGACCAGATGCAGGGTCTACTCTTTCTGGATGTTGTAGTCA 57062908
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | | | ||| || || || || ||||| || | ||||| || ||| |
Sbjct 57062909 GAAAGACTGCGGCCATCTTCCCGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCACGG 57062968
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| | |||||||||||||| ||||||| || | |||| ||||| | | |||
Sbjct 57062969 GGATTGCCTTCTTTATCTTGGATTTTGGCCTTGACATTTTCGATAGTGGCACTGGGCTCC 57063028
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||||| || || || | || || || || ||||| || || || ||||||||
Sbjct 57063029 ACTTCAAGGGTGATGATCTTGCCAGTAAGGGTTTTCACGAAGATCTGCATTTT 57063081
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||||| || || ||||| |||| || | ||| || || || |||||
Sbjct 57062621 ATACCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCA 57062680
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | ||| || | || || || ||||| || | ||||| ||||| |
Sbjct 57062681 GAAAGAGTACCGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGATCGTGG 57062740
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || |||||||||||||| || |||| || | |||| || || || | |||
Sbjct 57062741 GGGATGCCTTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCC 57062800
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || || || || || || || || || || || || |||||
Sbjct 57062801 ACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 57062850
Score = 86.0 bits (94), Expect = 1e-11
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193
||||| |||| || || ||||| |||| || | |||||| || || ||||| ||
Sbjct 62366351 CCACCCCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAA 62366410
Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253
| || | ||| || | || || || ||||| || | ||||| || || |||||
Sbjct 62366411 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 62366470
Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313
|| |||||||||||||| || |||| || | |||| || || || | ||| ||
Sbjct 62366471 ATGCCTTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 62366530
Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| ||||| || || || || || || || || || || || |||||
Sbjct 62366531 TCCAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 62366577
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||||| || || ||||| |||| || | ||| || || || |||||
Sbjct 62366576 ATACCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCA 62366635
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | ||| || | || || || ||||| || | ||||| || || |||
Sbjct 62366636 GAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGA 62366695
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||||||||| || || |||| || | |||| || || || | |||
Sbjct 62366696 GGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCC 62366755
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || || || || || || || || || || || || |||||
Sbjct 62366756 ACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 62366805
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899196577121520
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