Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq168 141 2e-28
seq1 132 9e-26
seq773 123 5e-23
seq931 120 6e-22
seq235 109 1e-18
seq786 105 1e-17
seq646 105 1e-17
seq885 100 6e-16
seq126 86.0 1e-11
seq287 84.2 4e-11
>seq168
Length=201391403
Score = 141 bits (156), Expect = 2e-28
Identities = 172/232 (74%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
|||||| | ||| | || || | ||| | ||||| ||| ||| || ||||| || ||||
Sbjct 5653901 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATATTGTAGTCAG 5653843
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || || ||| |||| |||| || || ||||||||||| | |||||| |||||||| |
Sbjct 5653842 ACAAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAG 5653783
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| |||||||| ||||| ||||| || |||||||| ||| | ||| || | ||| |
Sbjct 5653782 GAATTCCTTCCTTATCCTGTATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAA 5653723
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
| || || || ||||| || || || | ||||| | || |||||||||||
Sbjct 5653722 CCTCGAGGGTGATGGTCTTTCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 5653671
>seq1
Length=228908639
Score = 132 bits (146), Expect = 9e-26
Identities = 170/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
|||||| | ||| | || || | ||| | ||||| ||| ||| || ||||| || ||||
Sbjct 172116178 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATATTGTAGTCAG 172116120
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || || ||| |||| |||| || || ||||||||||| | |||||| |||||||| |
Sbjct 172116119 ACAAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAG 172116060
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| |||||||| ||||| || || || |||||||| ||| | ||| || | |||
Sbjct 172116059 GAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAG 172116000
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
| || || || ||||| || || || | ||||| | || |||||||||||
Sbjct 172115999 CCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 172115948
>seq773
Length=81384781
Score = 123 bits (136), Expect = 5e-23
Identities = 168/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
|||||| | ||| | || || ||||| ||||| ||| ||| || |||| || ||||
Sbjct 51769182 ACCACCACGAAGTCTCAACACAAAATGAGGAGTAGACTCCTTTTGAC-TATTGTAGTCAG 51769240
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || || | | |||| |||| || || ||||||||||| | |||||| |||||||| |
Sbjct 51769241 ACAAAGTACATCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAG 51769300
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| |||||||| ||||| || || || |||||||| ||| | ||| || | |||
Sbjct 51769301 GAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAG 51769360
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
| || || || ||||| || || || | ||||| | || |||||||||||
Sbjct 51769361 CCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 51769412
>seq931
Length=156331669
Score = 120 bits (132), Expect = 6e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 192311 CACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGAT 192369
|||| | ||| | || || | ||| | ||||| ||| ||| || || || | |||||
Sbjct 3273478 CACCACAAAGTCTCAACACAAGATGAAGAGTAGGCTCCTTTTGA-ATGTTGCAGTCAGAC 3273420
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
|| || ||| |||| |||| ||| || ||||||||||| | ||| || |||||||| ||
Sbjct 3273419 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 3273360
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489
|||||||| ||||| | || || |||||||| ||| | |||||| | ||| ||
Sbjct 3273359 ATTCCTTCCTTATCCTAGATCTTGGCCTTTACATTTTCTATCGCATCTGAGGGTTCAACC 3273300
Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| || || ||||| || || ||| ||||| | || ||||||| |||
Sbjct 3273299 TCAAGGGTGATGGTCTTCCCCCTTAGGGTTTTCACGAAAATCTGCAGTTT 3273250
>seq235
Length=173266796
Score = 109 bits (120), Expect = 1e-18
Identities = 165/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
|||||| | ||| | || || | ||| | ||||| || ||| || ||| | || ||||
Sbjct 115827921 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGAATCCTTTTGA-ATACTGTAGTCAG 115827863
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || || | | |||| |||| ||| || ||||||||||| | ||| || |||||||| |
Sbjct 115827862 ACAAAGTACATCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGTCTTTGCTGATCAGGAG 115827803
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| |||||||| ||||| || || || |||||||| ||| | ||| | | |||
Sbjct 115827802 GAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGTTCAG 115827743
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
| || || || ||||| || | | | ||||| || || |||||||||||
Sbjct 115827742 CCTCGAGGGTGATGGTCTTCTCCATAAGAGTTTTCATGAAAATCTGCATTTT 115827691
>seq786
Length=95888799
Score = 105 bits (116), Expect = 1e-17
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||| | || | || || ||||| | ||||| |||||| ||||| || ||||
Sbjct 10327976 ACCACCACGCAGTCTCAACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGCCAGA 10327917
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|| || | | |||| |||| ||| || ||||||||||| ||| || |||||||| ||
Sbjct 10327916 CAAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGG 10327857
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|||||||| ||||| || || || |||||||| ||| | ||| | | ||| ||
Sbjct 10327856 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCAATGGTTCAAC 10327797
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
| || || | || || || || | ||||| | || |||||||||||
Sbjct 10327796 CTTGAGGGTGGTTGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 10327746
>seq646
Length=133456746
Score = 105 bits (116), Expect = 1e-17
Identities = 169/243 (70%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| |||||||| ||||| | || | || | |||| |||||| ||| || ||||||
Sbjct 124982935 ATCCCACCTCTGAGACGGAGCACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCA 124982994
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || || |||| |||| ||||| ||||||||||| | ||||| || |||||
Sbjct 124982995 GACAGGGTGCGCCCATCTTCCAGCTGTTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGA 124983054
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| |||||||| || || || ||||| || | || | ||
Sbjct 124983055 GGGATGCCTTCCTTATCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCG 124983114
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTATTAGAA 192546
|| || || || ||||| |||||||| | || || | || ||||||||| | | | ||
Sbjct 124983115 ACCTCGAGGGTGATGGTCTTACCAGTCAGAGTCTTCACGAAGATCTGCATTGTCTGACAA 124983174
Query 192547 AAA 192549
|||
Sbjct 124983175 AAA 124983177
Score = 89.7 bits (98), Expect = 1e-12
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 192328 ACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCC 192387
|| || || | ||| | |||||| ||| || || ||||| | || ||| |||| |||
Sbjct 124982044 ACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTCC 124982103
Query 192388 AATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGT 192447
| ||||| |||||||||||||| ||||| || ||||| || || ||||| || |||||
Sbjct 124982104 AGCTGTTTCCCAGCAAAGATTAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGG 124982163
Query 192448 ATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 192507
|| || || ||||| || | || | || || || || || ||||| ||
Sbjct 124982164 ATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTCTTG 124982223
Query 192508 CCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | || || | || ||||||||
Sbjct 124982224 CCAGTCAGGGTCTTCACGAAGATCTGCAT 124982252
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| |||||||| ||||| | || | || | || | |||||| ||| || || |||
Sbjct 124982479 ATTCCACCTCTGAGACGGAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCA 124982538
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || || |||| |||| || || ||||||||||| || ||||| || |||||
Sbjct 124982539 GACAGGGTGCGCCCATCCTCCAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGA 124982598
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || || || ||||| || | || | ||
Sbjct 124982599 GGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCG 124982658
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || ||||| |||||||| | || || | || ||||||||
Sbjct 124982659 ACCTCGAGGGTGATGGTCTTACCAGTCAGGGTCTTCACGAAGATCTGCAT 124982708
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| |||||||| ||||| | || | || | || | |||||| ||| || || |||
Sbjct 124982707 ATCCCACCTCTGAGACGGAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCA 124982766
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || || |||| |||| || || ||||||||||| || ||||| || |||||
Sbjct 124982767 GACAGGGTGCGCCCATCTTCCAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGA 124982826
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || || || ||||| || | || | ||
Sbjct 124982827 GGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCG 124982886
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || ||||| |||||||| | || || | || ||||||||
Sbjct 124982887 ACCTCAAGGGTGATGGTCTTACCAGTCAGGGTCTTCACGAAGATCTGCAT 124982936
>seq885
Length=63231202
Score = 100 bits (110), Expect = 6e-16
Identities = 163/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
|||||| | ||| | || || | ||| | ||||| ||| ||| || || || || ||||
Sbjct 17717386 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATGTTGTAGTCAG 17717328
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || | | | |||| |||| ||| || | ||||||||| | ||| | |||||||| |
Sbjct 17717327 ACAAAGCACATACATCCTCCAGTTGCTTGCTAGCAAAGATCAGTCTTTACTGATCAGGAG 17717268
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| ||||||| ||||| || | || |||| ||| ||| | ||||| | |||
Sbjct 17717267 GAATTCCTTACTTATCCTGGGTCTTGGCCTTTATATTTTCTATCGTTTCTGAGGGTTCAG 17717208
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
| || || || ||||| || || || | ||||| | ||| |||||||||||
Sbjct 17717207 CCTCGAGGGTGATGGTCTTCCCTGTGAGGGTTTTCACAAAAATCTGCATTTT 17717156
>seq126
Length=135448346
Score = 86.0 bits (94), Expect = 1e-11
Identities = 115/160 (72%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439
|||| |||| ||| || ||||||||||| | ||| || | | |||| | ||||||| |
Sbjct 117543234 CATCTTCCAGTTGCTTGCCAGCAAAGATAAGTCTTTGCTAACCAGGAAGATTTCCTTCCT 117543175
Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499
|||| || || || |||||||| ||| | |||||| | ||| | || || || |
Sbjct 117543174 TATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAAGGTTCAGCCTCCAGGGTGA 117543115
Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|||| || | || | ||||| ||||| ||||||| |||
Sbjct 117543114 TGGTCTTCTCTGTAAGAGTTTTTATAAAAATCTGCACTTT 117543075
>seq287
Length=159110946
Score = 84.2 bits (92), Expect = 4e-11
Identities = 160/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
|||||| | ||| | || || | ||| | |||| ||| ||| || || || || ||||
Sbjct 157000947 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAAGCTCCTTTTGA-ATGTTGTAGTCAG 157000889
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| | || | | |||| |||| ||| || ||||||||||| | ||| || |||||||| |
Sbjct 157000888 ACA--GTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAG 157000831
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| ||||||| ||||| | || || |||||||| | | || | | ||| |
Sbjct 157000830 GAATTCCTTTCTTATCCCGGATCTTGGCCTTTACATTTTCTGTCATATACAAGGGTTCAA 157000771
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
| | || || ||||| || || || | ||||| || | |||||||||||
Sbjct 157000770 CCTTGAGGGTGATGGTCTTCCCCGTAAGGGTTTTTATGGAAATCTGCATTTT 157000719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 983966485694850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |