Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq168 140 6e-28
seq1 131 3e-25
seq773 122 2e-22
seq786 109 1e-18
seq235 109 1e-18
seq885 95.1 2e-14
seq219 95.1 2e-14
seq848 84.2 4e-11
>seq168
Length=201391403
Score = 140 bits (154), Expect = 6e-28
Identities = 175/240 (73%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || |||||| | ||||| || || | ||| | ||||| ||| || ||||||
Sbjct 5653910 TTTCTTAGCACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATT 5653851
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952
|| || || |||| ||| | || |||| || || |||||||| || | |||||| ||
Sbjct 5653850 GTAGTCAGACAAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTG 5653791
Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012
||||| || |||||||| ||||| ||||| || |||||||| ||| ||||| ||
Sbjct 5653790 ATCAGGAGGAATTCCTTCCTTATCCTGTATCTTGGCCTTTACATTTTCTATCGTATCCGA 5653731
Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
| ||| || || || || ||||| || || || | ||||| | ||| |||||||||||
Sbjct 5653730 GGGTTCAACCTCGAGGGTGATGGTCTTTCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 5653671
>seq1
Length=228908639
Score = 131 bits (144), Expect = 3e-25
Identities = 173/240 (72%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || |||||| | ||||| || || | ||| | ||||| ||| || ||||||
Sbjct 172116187 TTTCTTAGCACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATT 172116128
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952
|| || || |||| ||| | || |||| || || |||||||| || | |||||| ||
Sbjct 172116127 GTAGTCAGACAAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTG 172116068
Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012
||||| || |||||||| ||||| || || || |||||||| ||| ||||| ||
Sbjct 172116067 ATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGA 172116008
Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
| ||| | || || || ||||| || || || | ||||| | ||| |||||||||||
Sbjct 172116007 GGGTTCAGCCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 172115948
>seq773
Length=81384781
Score = 122 bits (134), Expect = 2e-22
Identities = 171/240 (71%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || |||||| | ||||| || || ||||| ||||| ||| || | ||||
Sbjct 51769173 TTTCTTAGCACCACCACGAAGTCTCAACACAAAATGAGGAGTAGACTCCTTTTGACTATT 51769232
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952
|| || || |||| | | | || |||| || || |||||||| || | |||||| ||
Sbjct 51769233 GTAGTCAGACAAAGTACATCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTG 51769292
Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012
||||| || |||||||| ||||| || || || |||||||| ||| ||||| ||
Sbjct 51769293 ATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGA 51769352
Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
| ||| | || || || ||||| || || || | ||||| | ||| |||||||||||
Sbjct 51769353 GGGTTCAGCCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 51769412
>seq786
Length=95888799
Score = 109 bits (120), Expect = 1e-18
Identities = 168/240 (70%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || |||||| | |||| || || ||||| | ||||| |||||| ||||||
Sbjct 10327985 TTTCTTAGCACCACCACGCAGTCTCAACACAAAATGAAGAGTAGACTCTTTTTGAATATT 10327926
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952
|| | || |||| | | | || |||| ||| || |||||||| || ||| || ||
Sbjct 10327925 GTAGCCAGACAAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTG 10327866
Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012
||||| || |||||||| ||||| || || || |||||||| ||| ||||| |
Sbjct 10327865 ATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCAA 10327806
Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
| ||| || | || || | || || || || | ||||| | ||| |||||||||||
Sbjct 10327805 TGGTTCAACCTTGAGGGTGGTTGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 10327746
>seq235
Length=173266796
Score = 109 bits (120), Expect = 1e-18
Identities = 168/240 (70%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || |||||| | ||||| || || | ||| | ||||| || || |||| |
Sbjct 115827930 TTTCTTATCACCACCACGAAGTCTCAACACAAGATGAAGAGTAGAATCCTTTTGAATACT 115827871
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952
|| || || |||| | | | || |||| ||| || |||||||| || | ||| || ||
Sbjct 115827870 GTAGTCAGACAAAGTACATCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGTCTTTGCTG 115827811
Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012
||||| || |||||||| ||||| || || || |||||||| ||| ||||| |
Sbjct 115827810 ATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCAA 115827751
Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
| ||| | || || || ||||| || | | | ||||| ||||| |||||||||||
Sbjct 115827750 GGGTTCAGCCTCGAGGGTGATGGTCTTCTCCATAAGAGTTTTCATGAAAATCTGCATTTT 115827691
>seq885
Length=63231202
Score = 95.1 bits (104), Expect = 2e-14
Identities = 165/240 (69%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || |||||| | ||||| || || | ||| | ||||| ||| || ||| ||
Sbjct 17717395 TTTCTTAGCACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTT 17717336
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952
|| || || |||| | | | || |||| ||| || | |||||| || | ||| | ||
Sbjct 17717335 GTAGTCAGACAAAGCACATACATCCTCCAGTTGCTTGCTAGCAAAGATCAGTCTTTACTG 17717276
Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012
||||| || ||||||| ||||| || | || |||| ||| ||| || |||||
Sbjct 17717275 ATCAGGAGGAATTCCTTACTTATCCTGGGTCTTGGCCTTTATATTTTCTATCGTTTCTGA 17717216
Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
| ||| | || || || ||||| || || || | ||||| | || |||||||||||
Sbjct 17717215 GGGTTCAGCCTCGAGGGTGATGGTCTTCCCTGTGAGGGTTTTCACAAAAATCTGCATTTT 17717156
>seq219
Length=165317712
Score = 95.1 bits (104), Expect = 2e-14
Identities = 133/186 (72%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
||| || || || || |||| | | |||| |||| ||| || |||||||| || | |||
Sbjct 121763107 AATGTTGTAGTCAGACAAAGCACATCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGTCT 121763166
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
| | ||||| || |||||||| |||||||| || || ||||||||| | | ||
Sbjct 121763167 TTACTCGTCAGAAGGAATTCCTTCCTTATCTTGGATGTTGGCTTTTACATT--TCCTTGT 121763224
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||| | | ||| || || ||| | |||| ||| | | || ||| | ||||| |||||
Sbjct 121763225 ATCCAAGGGTTCAACCTCAAGACTGATGGCTTTCTCCATAAAGGTTGTTATGAAAATCTG 121763284
Query 172067 CATTTT 172072
||||||
Sbjct 121763285 CATTTT 121763290
>seq848
Length=78004504
Score = 84.2 bits (92), Expect = 4e-11
Identities = 142/195 (73%), Gaps = 17/195 (9%)
Strand=Plus/Plus
Query 126994 Aatatgataaacctatatattatacttactatgatttatatagaaatatga-atgatata 127052
||||||||| | | |||||||||| || ||| | |||| |||||| || |||||
Sbjct 58227338 AATATGATATAAC-ATATATTATA--TAATATA--TAATATG---ATATGATATAATATA 58227389
Query 127053 att-tacaattatgataata-ATATTGTTAAAACATATATGGATATTTTATTATCTCAAA 127110
||| || ||| || ||||| ||||| |||||||||| || |||||||||||| | | |
Sbjct 58227390 ATTATATAAT-ATATTAATATATATTAATAAAACATATTTGCATATTTTATTATATTATA 58227448
Query 127111 TACAATTTTTATCAACTATAAATATTaaaaaaaTATGTAATACATATTCGAATAGAATGG 127170
|| ||| | || | ||| | ||| || | ||||| ||||| | ||| ||| ||
Sbjct 58227449 TATAATATACATTA--TATTATTATAAATATAATATATAATATACATT---ATATTATTA 58227503
Query 127171 TACATATATTATATA 127185
|| ||||| ||||||
Sbjct 58227504 TAAATATAATATATA 58227518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 904675387603800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |