Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq931 111 5e-19
seq786 87.8 5e-12
>seq931
Length=156331669
Score = 111 bits (122), Expect = 5e-19
Identities = 368/565 (65%), Gaps = 7/565 (1%)
Strand=Plus/Minus
Query 133076 TTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAGCAAGAT 133135
||||| || ||||| || || || | || || |||||||||||||| || | | | |
Sbjct 44830891 TTTGTCATCTTCCCCATCGAGTACCATGATATCTGGCAGATGTATAAGAAGGCGGAGGCT 44830832
Query 133136 TTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGAAGCCCTT 133195
| || ||||| | || || || | ||||| ||| ||||||||| ||||
Sbjct 44830831 TCCTTCTGGACCACCGAGGAGGTGGACCTGTCCAAGGACATTCGGCACTGGGAACCCCTG 44830772
Query 133196 ACTGGGGATGAAAAACATTTTATTTCT-ATGATTTTAGCGTTTTTTGCTGCGAGTGATGG 133254
| || || | | ||||||| || ||| || | | || ||||| || ||||||||
Sbjct 44830771 AAGCCCGAGGAGAGATATTTTATATCCCATG-TTCTGGTTTTCTTTGCAGCAAGTGATGG 44830713
Query 133255 TATTGTTCTTGAAAATTTAGGAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGCCCG 133314
|| || ||||||||| | || |||| | |||||| | | ||||||||
Sbjct 44830712 CATAGTAAATGAAAATTTGGTGGAGCGATTTAGCCAAATAGTTCAGATTACAGAAGCCCG 44830653
Query 133315 TGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCT 133374
|| ||||| | || ||||| |||||||| || |||||| | ||| | ||
Sbjct 44830652 CTGTTTCTATGGCTTCCAAATTGCCATGGAAAACATACATTCTGAAATGTATAGTCTCCT 44830593
Query 133375 AATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGCCATT-AGCG 133433
||||| ||||||||||||||| | | | | | || ||||| |||||| | ||
Sbjct 44830592 TATTGACACTTACATCAAAGATCTCAAAGAAAGGGAATTTCTCTTCAATGCCATTGAACG 44830533
Query 133434 AATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTG 133493
| | |||||| | || ||||| | || ||||| | ||||| |||||| |
Sbjct 44830532 A--TGCCTTGTGTCAAGAAGAAGGCAGATTGGGCCTTGCGCTGGATTGGGGACAAAGAGG 44830475
Query 133494 CGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTG 133553
| | | || | | | | || || || |||| |||||| ||||| || || ||||
Sbjct 44830474 CTACCTATGGTGAACATGTTGTAGCCTTCGCTGCAGTAGAAGGCATCTTCTTTTCTGGTT 44830415
Query 133554 CGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCT 133612
| || ||| || || || ||||| || || || || | ||||| || |||||
Sbjct 44830414 C-TTTTGCATCGATATTCTGGCTCAAGAAACGAGGACCGATGCCTGGCCTCACGTTTTCC 44830356
Query 133613 AACGAACTTATTTCAAGGGACGAGG 133637
|| ||||||||| || || ||||
Sbjct 44830355 AATGAACTTATTAGCAGAGATGAGG 44830331
>seq786
Length=95888799
Score = 87.8 bits (96), Expect = 5e-12
Identities = 159/233 (68%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666
|||||| || || || ||||| || ||||| || || ||||||| ||||| || ||
Sbjct 7522869 ACCAGTCTCAGCAGTCTTGACAGCCGTGTCAATGAGCCCCTCACGACCCCCCATGGCGTG 7522810
Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726
||| || | ||| ||| || || | | ||||| |||| || || |||||
Sbjct 7522809 GAAAAAGAACTCAGTGGGTGTGAGGCCGGCTAGGTAGGAGTTCTCCACAAAGCCACGGCT 7522750
Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786
||| ||| | ||| |||| | ||||| ||||| |||| || || |||| ||||
Sbjct 7522749 CTCAGGCCCGTAGTCATCCTTGATGAAGTGAGGCAGAGTCCGGTGCTTGAAGCCAAATGG 7522690
Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAA 302839
|| ||||| || || ||||||||||| || | | | ||| | ||| ||||
Sbjct 7522689 AATCCGCTTGCCCTCGACGTTCTGCTGGCCGACGACAGCAATGACCTGGGAAA 7522637
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471049885681607
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |