Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12- 19] 40,711 sequences; 3,063,362,794 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1 161 1e-33 seq235 149 8e-30 seq5778 140 4e-27 seq168 122 1e-21 seq219 91.5 2e-12 seq39 91.5 2e-12 seq931 89.7 6e-12 seq287 87.8 2e-11 >seq1 Length=228908639 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| ||||| ||| | |||||||||||| ||||| | ||||| | || Sbjct 208216880 GCTTGGCCAGCTCGCCAGGCAGCAGCAGGCGCACGGCCGTCTGCACTTCGCGGGACGTGA 208216821 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| ||| ||||||| || ||||||| |||| | Sbjct 208216820 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAGA 208216761 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| || |||||||||| ||| | |||| |||||||| |||||||| Sbjct 208216760 TGTCATTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 208216701 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 208216700 GCACCTGCTTCAGCACCTTGTA 208216679 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| ||||| ||| | |||||||||||| ||||| | ||||| | || Sbjct 208222689 GCTTGGCCAGCTCGCCAGGCAGCAGCAGGCGCACGGCCGTCTGCACTTCGCGGGACGTGA 208222748 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| ||| ||||||| || ||||||| |||| | Sbjct 208222749 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAGA 208222808 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| || |||||||||| ||| | |||| |||||||| |||||||| Sbjct 208222809 TGTCATTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 208222868 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 208222869 GCACCTGCTTCAGCACCTTGTA 208222890 Score = 158 bits (174), Expect = 1e-32 Identities = 156/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| |||||||||||||| | || Sbjct 128866948 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGATGTGA 128867007 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| ||| ||||| ||||||| |||| | Sbjct 128867008 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAAGCCTCTCCCGCGATGCGCTCGAAGA 128867067 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | ||| |||||||| |||||||| Sbjct 128867068 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTAGACGAGATGCCGGTGTCGGGGT 128867127 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 128867128 GGACCTGCTTCAGCACCTTGTA 128867149 Score = 152 bits (168), Expect = 6e-31 Identities = 155/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| |||||| ||| | ||||||||| || |||||||||||||| | || Sbjct 128792094 GCTTGGCCAACTCGCCGGGCAGCAGCAGGCGCACAGCCGTCTGGATCTCGCGGGATGTGA 128792153 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| ||| ||||| ||||||| |||| | Sbjct 128792154 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAAGCCTCTCCCGCGATGCGCTCGAAGA 128792213 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| |||||||| Sbjct 128792214 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 128792273 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 128792274 GGACCTGCTTCAGCACCTTGTA 128792295 Score = 134 bits (148), Expect = 2e-25 Identities = 152/202 (75%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||| ||| ||||||||||| || | || Sbjct 128822704 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCATGGCCGTCTGGATCTC-CGGGACGTGA 128822646 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| ||||||||| ||| ||||| ||||||| |||| | Sbjct 128822645 TGGTGGAGCGCTTGTT---GTGCGCCAGGCGGGACGCCTCTCCCGCGATGCGCTCGAAGA 128822589 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||| | |||| ||||||| |||||||| Sbjct 128822588 TGTCGTTGAGGAAGGAGTTCATGATGCCCATGGCCTTGCACCAGATGCCGGTGTCGGGGT 128822529 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 128822528 GGACCTGCTTCAGCACCTTGTA 128822507 Score = 125 bits (138), Expect = 9e-23 Identities = 146/195 (75%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 1254350 CAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTT 1254409 ||| |||||| ||| | |||||||| ||| ||||||||||| || | ||| ||| Sbjct 128829835 CAGCTCGCCGGGCAGCAGCAGGCGCATGGCCGTCTGGATCTC-CGGGACGTGATGGTGGA 128829893 Query 1254410 GCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTT 1254469 ||||||||| ||||||||| ||| ||||| ||||||| |||| |||||||| Sbjct 128829894 GCGCTTGTT---GTGCGCCAGGCGGGACGCCTCTCCCGCGATGCGCTCGAAGATGTCGTT 128829950 Query 1254470 GACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1254529 || || |||||||||| ||| | |||| ||||||| ||||||||| ||||| Sbjct 128829951 GAGGAAGGAGTTCATGATGCCCATGGCCTTGCACCAGATGCCGGTGTCGGGGTGGACCTG 128830010 Query 1254530 CTTGAGCACCTTGTA 1254544 ||| ||||||||||| Sbjct 128830011 CTTCAGCACCTTGTA 128830025 >seq235 Length=173266796 Score = 149 bits (164), Expect = 8e-30 Identities = 154/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | | |||||||||||||||||||||||| | | | || Sbjct 28393067 GCTTGGCCAGCTCCCCCGGAAGCAGCAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGA 28393126 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| ||| |||||| | ||||||| |||| | Sbjct 28393127 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGAAGCCTCGCTTGCGATGCGCTCGAAGA 28393186 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | ||| |||||||| |||||||| Sbjct 28393187 TGTCGTTGACGAAGGAGTTCATGATTCCCATGGCCTTAGAAGAGATGCCGGTGTCGGGGT 28393246 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 28393247 GGACCTGCTTCAGCACCTTGTA 28393268 Score = 140 bits (154), Expect = 4e-27 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 ||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||| || Sbjct 26808892 GCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCTCTGGAGGTGATAGTC 26808833 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 ||||||||| | |||||||| ||| |||||| ||||||| |||| || ||| Sbjct 26808832 GAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCAGCGATGCGCTCGAAGATATCG 26808773 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 ||||| || |||||||||| ||| | |||| |||||||| ||||||||| ||| Sbjct 26808772 TTGACGAAGGAGTTCATGATGCCCATGGCCTTGGATGAGATGCCGGTGTCGGGGTGGACC 26808713 Query 1254528 TGCTTGAGCACCTTGTA 1254544 ||||| ||||||||||| Sbjct 26808712 TGCTTTAGCACCTTGTA 26808696 Score = 140 bits (154), Expect = 4e-27 Identities = 152/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | |||||||||||| ||||||||||| | | | || Sbjct 28422399 GCTTGGCCAGCTCCCCGGGGAGCAACAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 28422340 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| |||||| | ||||||| |||| | Sbjct 28422339 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCGGCGATGCGCTCGAAGA 28422280 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| || |||||||||| ||| | |||| ||||| || |||||||| Sbjct 28422279 TGTCATTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATACCGGTGTCGGGGT 28422220 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 28422219 GGACCTGCTTCAGCACCTTGTA 28422198 Score = 134 bits (148), Expect = 2e-25 Identities = 151/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | | |||||||||||| ||||||||||| | | | || Sbjct 26781972 GCTTGGCCAGCTCCCCCGGAAGCAGCAGGCGCACGGCCGTCTGGATCTCTCTGGAGGTGA 26781913 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| |||||| ||||||| |||| | Sbjct 26781912 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTCGAAGA 26781853 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || || ||||||| | ||| | |||| |||||||| |||||| | Sbjct 26781852 TGTCGTTGACGAAGGAATTCATGATCCCCATTGCCTTGGAAGAGATGCCGGTGTCGGGAT 26781793 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 26781792 GGACCTGCTTCAGCACCTTGTA 26781771 Score = 134 bits (148), Expect = 2e-25 Identities = 151/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || ||| ||| | |||||||||||| ||||||||||| | | | || Sbjct 27715524 GCTTGGCCAACTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 27715583 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| ||||| ||||||| |||| | Sbjct 27715584 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCACCCGCGATGCGTTCGAAGA 27715643 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | ||| ||||||||| ||| |||| Sbjct 27715644 TGTCGTTGACGAAGGAGTTCATGATTCCCATGGCCTTAGAGGAGATGCCGGTGTCCGGGT 27715703 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 27715704 GGACCTGCTTCAGCACCTTGTA 27715725 Score = 134 bits (148), Expect = 2e-25 Identities = 151/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | || Sbjct 28472924 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 28472865 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| |||||| ||||||| || | | Sbjct 28472864 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCAGCGATGCGCTCAAAGA 28472805 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | ||| |||||||| |||||||| Sbjct 28472804 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTCGATGAGATGCCGGTGTCGGGGT 28472745 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | || ||||| ||||||||||| Sbjct 28472744 GGACTTGCTTCAGCACCTTGTA 28472723 Score = 131 bits (144), Expect = 2e-24 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | ||| |||||||||||||||||||| | | | | Sbjct 26828847 GCTTGGCCAGCTCTCCGGGAAGCAGCAGACGCACGGCGGTCTGGATCTCCCTGGAGGTAA 26828906 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| ||||||||| |||||| ||||||| |||| | Sbjct 26828907 TGGTCGAGCGCTTGTTGTAGTGGGCCAGACGGGAAGCCTCGCCTGCGATGCGCTCGAAGA 26828966 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||||| ||| | |||| |||||||| ||||||| Sbjct 26828967 TGTCGTTAACGAAGGAGTTCATGATACCCATGGCCTTGGATGAGATGCCAGTATCGGGGT 26829026 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | ||||| || ||||||||||| Sbjct 26829027 GAACCTGTTTCAGCACCTTGTA 26829048 Score = 131 bits (144), Expect = 2e-24 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| | | | ||||||||||| ||||||||||| | || || Sbjct 28400869 GCTTGGCCAATTCCCCGGGTAGCAGTAGGCGCACGGCCGTCTGGATCTCCCTCGAAGTGA 28400810 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || || || | |||| || || | | Sbjct 28400809 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGTGACGCTTCTCCGGCGATACGCTCAAAGA 28400750 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| | ||| | |||| ||||||||| |||||||| Sbjct 28400749 TGTCGTTGACGAAGGAGTTCATGATCCCCATAGCCTTGGAGGAGATGCCGGTGTCGGGGT 28400690 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 28400689 GGACCTGCTTCAGCACCTTGTA 28400668 Score = 125 bits (138), Expect = 9e-23 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || ||| | | | ||||||||| || || |||||||| | | ||| | Sbjct 26870812 TGGCCAGCTCCCCGGGTAGCAGCAGGCGCACAGCCGTTTGGATCTCCCTGGAAGTGATGG 26870753 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | |||||||| ||| |||||| | ||||| |||| |||| Sbjct 26870752 TCGAGCGCTTGTTATAATGCGCCAGGCGGGAAGCCTCGCCTGCAATGCGCTCGAAAATGT 26870693 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| || |||||||| | | ||| | |||| |||||||| ||||||||| | Sbjct 26870692 CGTTGACGAAGGAGTTCATAATCCCCATAGCCTTGGACGAGATGCCGGTGTCGGGGTGGA 26870633 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 26870632 CCTGCTTCAGCACCTTGTA 26870614 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || ||| ||| | |||||||||||| ||||||||||| | | | || Sbjct 27701312 GCTTGGCCAACTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTAGAGGTGA 27701371 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| ||||| | ||||| |||| | Sbjct 27701372 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCACCTGCAATGCGCTCGAAAA 27701431 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| |||||||| ||||||| ||| | |||| || ||||| ||| |||| Sbjct 27701432 TGTCGTTCACAAACGAATTCATGATACCCATGGCCTTGGACGAAATGCCGGTGTCAGGGT 27701491 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 27701492 GGACCTGCTTCAGCACCTTGTA 27701513 Score = 116 bits (128), Expect = 5e-20 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 ||||| || || ||| | ||||||||| || ||||| ||||| | | | ||| || Sbjct 26665292 GCCAGCTCCCCAGGCAGCAGCAGGCGCACAGCCGTCTGAATCTCCCTGGAGGTGATGGTC 26665351 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 |||||| || |||| ||||| || |||||| ||||||| |||| |||||| Sbjct 26665352 GAGCGCTTATTGTAGTGAGCCAGGCGAGAAGCCTCGCCCGCGATGCGCTCGAAGATGTCG 26665411 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 ||||| || || ||||||| | ||| | |||| |||||||| ||||||||| ||| Sbjct 26665412 TTGACGAAGGAATTCATGATCCCCATGGCCTTGGATGAGATGCCGGTGTCGGGGTGGACC 26665471 Query 1254528 TGCTTGAGCACCTTGTA 1254544 ||||| || |||||||| Sbjct 26665472 TGCTTCAGAACCTTGTA 26665488 Score = 116 bits (128), Expect = 5e-20 Identities = 147/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | | |||||||||||| ||||||||||| | | | || Sbjct 26747253 GCTTGGCCAGCTCTCCCGGAAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 26747312 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| |||||| ||||||| || | | Sbjct 26747313 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTCAAATA 26747372 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || || ||||||| ||| | |||| |||||||| |||||| | Sbjct 26747373 TGTCGTTAACGAAAGAATTCATGATGCCCATGGCCTTGGAAGAGATGCCAGTGTCGGGAT 26747432 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| | ||||||||| Sbjct 26747433 GGACCTGCTTCAACACCTTGTA 26747454 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| | ||| || ||| | |||||||||||| ||||||||||| | | | || Sbjct 26348989 GCTTGGCTAATTCCCCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 26349048 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| | |||||||| || ||||| | | ||||| || | | Sbjct 26349049 TGGTCGAGCGCTTGTCATAATGCGCCAGGAGGGAAGCCTCACCGGCAATGCGCTCAAAAA 26349108 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| | ||||| || ||||||| ||| | |||| ||||| || ||| |||| Sbjct 26349109 TGTCACTAACAAAAGAATTCATGATACTCATGGCCTTGGAAGAGATTCCAGTGTCCGGGT 26349168 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| ||||||||||||||| Sbjct 26349169 GGACCTGCTTCAGCACCTTGTAGATG 26349194 >seq5778 Length=3184 Score = 140 bits (154), Expect = 4e-27 Identities = 152/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||||||| || | | | |||||||||||| ||||||||||| | | | || Sbjct 2957 GCTTGGCCAGTTCCCCAGGGAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 2898 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| | || ||||| ||| |||||| | ||||||| |||| | Sbjct 2897 TGGTCGAACGCTTGTTGTAATGAGCCAGGCGGGAAGCCTCGCCGGCGATGCGCTCGAAGA 2838 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||||||||| || ||||||| | ||| | ||| ||||||||| |||||||| Sbjct 2837 TATCGTTGACAAAGGAATTCATGATCCCCATGGCTTTGGAGGAGATGCCGGTGTCGGGGT 2778 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 2777 GGACCTGCTTCAGCACCTTGTA 2756 >seq168 Length=201391403 Score = 122 bits (134), Expect = 1e-21 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || ||| ||| | ||||||| ||| ||||||||||| | | | || Sbjct 115634315 GCTTGGCCACCTCCCCGGGCAGCAGCAGGCGCTTGGCCGTCTGGATCTCCCTGGAGGTGA 115634374 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| ||| |||||| ||| | | |||| | Sbjct 115634375 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCCGCGACGTGCTCGAAGA 115634434 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| | ||| | ||| ||||||||| ||||| || Sbjct 115634435 TGTCGTTGATGAAGGAGTTCATGATCCCCATGGCCTTAGAGGAGATGCCGGTGTCGGAGT 115634494 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 115634495 GGACCTGCTTCAGCACCTTGTA 115634516 >seq219 Length=165317712 Score = 91.5 bits (100), Expect = 2e-12 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||| | |||||||| | |||| ||| || |||||| |||| ||||| Sbjct 117627793 GCTGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTTACATGCAAGACTGTTGCCAAT 117627734 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295 ||||||||||| || | || |||||||| ||||||||||| || ||||| Sbjct 117627733 ATGATCAAGGGGAAAACTCCTGAGGAGATTCGCAAGACCTTCAATATCAA 117627684 >seq39 Length=107640188 Score = 91.5 bits (100), Expect = 2e-12 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 869831 ACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCATACTTGCTGG 869890 ||||||||||||||||||| || ||||| ||||| || ||||||| ||| | | ||| Sbjct 97372279 ACCTCCTCGGCGGTCCAGAAGGAAGCCTCTGCCTTCTTATACATCTGCCAGATATCATGG 97372338 Query 869891 TAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGCGCAACAGGGGTTC 869943 || ||| ||||||| |||||||||| |||||| || | || ||| || || Sbjct 97372339 TACTCGATGGGGAAGATGACAAAGCGGCGGGGGTTTTCTCTCAGCAGCGGCTC 97372391 >seq931 Length=156331669 Score = 89.7 bits (98), Expect = 6e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 869825 AGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCATACT 869884 |||||||||||||||| |||||||| || ||||| ||||| || ||||||| ||| | Sbjct 44830803 AGGTCCACCTCCTCGGTGGTCCAGAAGGAAGCCTCCGCCTTCTTATACATCTGCCAGATA 44830862 Query 869885 TGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGCGCAACAGGGGTTC 869943 | ||||| ||| ||||||| |||||||||| ||||| | | || ||| || || Sbjct 44830863 TCATGGTACTCGATGGGGAAGATGACAAAGCGGCAAGGGTTTCCTCTCAGCAGCGGCTC 44830921 >seq287 Length=159110946 Score = 87.8 bits (96), Expect = 2e-11 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 1592180 ATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTG 1592239 || || || || |||||| | |||||||| | |||| ||| || |||||| |||| Sbjct 65309046 ATTCTGGCTGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTTACATGCAAGACTGTT 65308987 Query 1592240 GCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295 ||||| ||||||||||| || | || |||||||| |||||||| || || ||||| Sbjct 65308986 GCCAATATGATCAAGGGGAAAACTCCTGAGGAGATTCGCAAGACATTCAATATCAA 65308931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6103798264690387