Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_024303.1
Length=144898
Score E
Sequences producing significant alignments: (Bits) Value
seq39 95.1 1e-14
seq287 84.2 2e-11
>seq39
Length=107640188
Score = 95.1 bits (104), Expect = 1e-14
Identities = 128/176 (73%), Gaps = 2/176 (1%)
Strand=Plus/Plus
Query 21122 TCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTG 21181
|| ||||| ||||| || | || |||||| | ||| | |||||| |||| ||||| |||
Sbjct 97058616 TCCAGCATATGGGGACCAACATGTGATGGCCTCGATCGGATTGTTGAGCGCTGTGACCTG 97058675
Query 21182 CCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTC 21241
|| || | || ||||| || ||| | | |||||||||||||||||||||| || |
Sbjct 97058676 CCCGAAATGCATGTGGGTGATTGGATGCTCTTTGAAAACATGGGCGCTTACA-CTGTTGC 97058734
Query 21242 AGCT-CTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCAG 21296
||| | || || || || ||||||| | |||| | ||||||| || ||||
Sbjct 97058735 TGCTGCCTCTACGTTCAATGGCTTCCAGAGGCCAACGATCTACTATGTGATGTCAG 97058790
>seq287
Length=159110946
Score = 84.2 bits (92), Expect = 2e-11
Identities = 198/298 (66%), Gaps = 6/298 (2%)
Strand=Plus/Plus
Query 20205 ATGCCTTTTGTGTGATAGATCTTGGAGAAATTGTGCAGAGACATTTTAGATGGCTCAAGG 20264
||||||| | ||| || || ||| |||| ||| | ||| |||| | |||| | | || |
Sbjct 128396963 ATGCCTTCTATGTCATGGACCTTAGAGACATTCTAAAGACACATCTAAGATAGTTAAAAG 128397022
Query 20265 CTTTGCCTAAAGTCATTCCATTTTACGCCGTTAAGGCCCAGAACGACGAGAGAGTCCTCA 20324
|| | ||| | |||| || ||||| || || || | || ||| |||| | |||
Sbjct 128397023 CTCTTCCTCATGTCACCCCCTTTTATGCAGTCAATT---ATAATGACAGCAGAGCCATCA 128397079
Query 20325 ---AGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGT 20381
|||| || |||||| | || || ||||||||||| || ||| || || || |
Sbjct 128397080 TGAAGACTCTTGCTGCCATCGGGACAGGATTTGACTGTGCTAGCAAGGCTGAAATACAAT 128397139
Query 20382 TACTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCAGC 20441
| |||| | ||||| | | | |||| ||| | | | ||| ||| ||||||| ||
Sbjct 128397140 TGGTGCAGATTCTGGAGATGCCCCCAGAGAGGTTTATCTATGCAAATTCTTGTAAACAAA 128397199
Query 20442 CTTCGCATATAACGTATGCCGCTCAAACTGGAGTAAGGCTGATGACTTTTGATAGTGA 20499
|| || || | ||| | || | | |||||| | |||||| ||||| || |||
Sbjct 128397200 TGTCTCAAATTAAGTACACTGCCAATAATGGAGTCCAGATGATGATTTTTGGTAATGA 128397257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 463309707438480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |