Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq7924 100 5e-16
seq235 100 5e-16
>seq7924
Length=2000
Score = 100 bits (110), Expect = 5e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444
|||||||||| | |||||||||| | || || || || ||||||||||| || || ||
Sbjct 1088 TGGTGGTACTTTGTATCTAAAGGAGTTGAGTATTTGGACACAGTGTTTTTTATTCTGAGA 1029
Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTTA 58504
|| || || || ||| || || || || |||||||| | ||| |||||||| ||
Sbjct 1028 AAGAAAAACAACCAAGTTTCTTTCCTTCATGTGTATCATCACTGTACGATGTTTACCTTG 969
Query 58505 GGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539
| ||| | || ||||| ||| |||||||||| ||
Sbjct 968 TGGTGGATTGGAATTAAGTGGGTTGCAGGAGGACA 934
>seq235
Length=173266796
Score = 100 bits (110), Expect = 5e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444
|||||||||| | |||||||||| | || || || || ||||||||||| || || ||
Sbjct 82083673 TGGTGGTACTTTGTATCTAAAGGAGTTGAGTATTTGGACACAGTGTTTTTTATTCTGAGA 82083614
Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTTA 58504
|| || || || ||| || || || || |||||||| | ||| |||||||| ||
Sbjct 82083613 AAGAAAAACAACCAAGTTTCTTTCCTTCATGTGTATCATCACTGTACGATGTTTACCTTG 82083554
Query 58505 GGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539
| ||| | || ||||| ||| |||||||||| ||
Sbjct 82083553 TGGTGGATTGGAATTAAGTGGGTTGCAGGAGGACA 82083519
Score = 84.2 bits (92), Expect = 4e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 58541 GCATTTTTCGGCGCTCAGTTGAATTCTTTTATCCATGTTATTATGTATAGTTATTATGGT 58600
|||||||| || || ||||||||||| ||||||||||| |||||||| || |||||
Sbjct 82081277 GCATTTTTTGGAGCCCAGTTGAATTCCTTTATCCATGTGATTATGTACTCATACTATGGG 82081218
Query 58601 ATGGCGGCGTGTGGACATATGTTTAAAAAGTATTTATGGTGGAAGCGTTACCTTACTATA 58660
| | || | ||| | | || | || ||| | |||||||| || ||||| |||||
Sbjct 82081217 TTAACTGCATTTGGCCCATGGATTCAGAAATATCTTTGGTGGAAACGATACCTGACTATG 82081158
Query 58661 ATGCAATTGGT 58671
||||| ||||
Sbjct 82081157 TTGCAACTGGT 82081147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 902951465332960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |