Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_024696.1
Length=180800
Score E
Sequences producing significant alignments: (Bits) Value
seq389 201 1e-46
seq168 194 2e-44
seq235 136 5e-27
>seq389
Length=121655618
Score = 201 bits (222), Expect = 1e-46
Identities = 602/921 (65%), Gaps = 11/921 (1%)
Strand=Plus/Minus
Query 162067 TTATGTCGGAGATACTCGTCTAGACACTGGACCGCGAACACGTCTCGTTCCTCATCGAAC 162126
||||||| | || ||| || | |||||||| || || | ||| ||| | || |||
Sbjct 58324521 TTATGTCTCAAATGCTCATCCAAACACTGGATGGCAAAGAGGTCAACATCCACGTCAAAC 58324462
Query 162127 TTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCGATCCGAAC 162186
|| || || |||| ||| || || || ||||| || | || || | ||||||
Sbjct 58324461 TTATTGGCAAACAAGTGGTGT---TTGCGCAGCATCCAGTTCAAGTCACCAGCTCCGAAA 58324405
Query 162187 ACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCATCGTCCACA 162246
| |||||| || ||||| || || || |||| ||||| || | || || | | |||
Sbjct 58324404 ATGCACACTGAGCGCACATGGACTCCATTGCAGGGCGGGTAGGGAGCACCCTTGGAAACA 58324345
Query 162247 TCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGGAGGTGTCG 162306
|| ||||| |||| |||||||| || ||||| | | || |||||||| || ||
Sbjct 58324344 TCACCCTCAAAGTACTGCCACTTGACAAACCTGGCAACTGCTTGCATGTCAGACAAATCA 58324285
Query 162307 TACTTGTACACTGACGGCACG-GCTCCAGGAACACCCGGCAGTCTCTGTAGAGTAGCCCA 162365
||||| | ||| | | | | || || || | || | || || | || |||||
Sbjct 58324284 TACTTATGG-CTGGCAGAGAGTGAGCCCGGGACTTCAGGAATCCTTTGGATGGTGGCCCA 58324226
Query 162366 CAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGACCGTTTT 162425
|| | || || || || || || || | | ||||||||| |||| || |||
Sbjct 58324225 GAGATACTCATCAGGGCTGTATGTGTCTTGTGCCCACTCCATAAACTTTTGGATTTTTTC 58324166
Query 162426 ATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTACCAGAAAA 162485
|| | ||| | || || || ||| | || | ||||| || || ||||||||
Sbjct 58324165 ATTCTGTAGTACATACCCCACATACTCCCTACTGACCACGAAGTAGGCACTGCCAGAAAA 58324106
Query 162486 CACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACTACCATTCCCTC 162545
| ||| | | ||||| || |||| | || ||||| | | |||| |
Sbjct 58324105 AAGAGGTGTTTCGAGTGGAGGAAGCATTTTGACAGTCCCTGTGTTTGTCAGCTTTCCATT 58324046
Query 162546 TACGACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTA-GACGGGTGTTCGGTCT 162604
|||||| | | | |||| ||||||| | |||| ||| | | | || || |
Sbjct 58324045 AACGACCTCATACCGCTTCTTCCACCTTTCT-TCTTTATGGGATGGCATCCTCTCCGTTT 58323987
Query 162605 CTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAGATTGGTCTTAA 162664
| || |||| ||| || ||| |||| | || || ||||| ||||| ||||
Sbjct 58323986 CCAGGTTGTTTTCTCCCATTAACAACTTGAGCTTCCTGACAATTTCTAGGTTGGTTTTAA 58323927
Query 162665 GGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCTGAGTCCGTACA 162724
||||| || | || || ||||| || | || ||||| || | || | | | || |
Sbjct 58323926 TAGGAAAATCCATACCACAAAGATTTATCAAGTACTTCCAGTTTGCACTCATTGCATAGA 58323867
Query 162725 GATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTACACGACGCTCT 162784
|||||| | ||||| || || ||||| || || |||||||| || || || || ||||
Sbjct 58323866 GATCCTTCATGCAGTTGAGGTCAGCCTGAACCCGGCTCCACGATGCATAAACCACACTCT 58323807
Query 162785 CCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATCACGGCCAGTG 162844
|||| | |||| ||||||||||| ||||| ||| | || |||||||| || |
Sbjct 58323806 CCAATCGGCTGGCCACAAAGACATTACTAAAACAGGAAGCGATGCCCATCACTGCAGCTA 58323747
Query 162845 AGAA--CATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTCTGAGGGGCGTA 162902
| | ||| || | ||| | || || || | ||| || | ||||||||| ||
Sbjct 58323746 AATAGGAATC--CTCGGATTTTGTGTCCACATGAATGCAATAGAAATTCTGAGGCATATA 58323689
Query 162903 GATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACGATAGAATACGC 162962
|||||||||||| | || || | ||| || ||||| || || ||||| |||||||| ||
Sbjct 58323688 GATGGCCCTCAGCAGCCTGTCAAGCATTTCAATCTTGTGATGAACCACTATAGAATATGC 58323629
Query 162963 TATGGGGAACTCAGCCTCCTC 162983
||| || ||||| ||||| ||
Sbjct 58323628 TATTGGAAACTCCGCCTCTTC 58323608
>seq168
Length=201391403
Score = 194 bits (214), Expect = 2e-44
Identities = 238/325 (73%), Gaps = 0/325 (0%)
Strand=Plus/Minus
Query 171771 CATAGAGTGTCAGACAGGTCTTACCCGATATTTTTCCGGACCCAAAAGTATTAAACAAAC 171830
|||||| || || |||| | | || || || || || | ||||| ||||| || | ||
Sbjct 113845679 CATAGACGGTGAGGCAGGCCGTTCCTGAGATCTTCCCAAAACCAAAGGTATTGAAGAGAC 113845620
Query 171831 ACATAAAACAGCCTTCGTCCTCCACGGTGGTGTTCCAAAAAGTCAATGTAGAATTTCTGA 171890
|||| |||| ||||| ||||||| |||| | ||||| || || | || || ||| ||
Sbjct 113845619 ACATGTAACACCCTTCATCCTCCAGGGTGATATTCCAGAAGGTGATGGTTGAGTTTTGGA 113845560
Query 171891 GTCCGAGTTGCGTAATGTTCACCCGGTCCTTGTACGGAGGCTGGACGACAACACCGTGAT 171950
|||| || || |||||||| | | |||||| || | |||||||| || || || || |
Sbjct 113845559 GTCCCAGCTGGGTAATGTTTATCTTGTCCTTATAGGCAGGCTGGATCACCACCCCATGGT 113845500
Query 171951 TCTCGCTGAACGTGGCCATGTTTTCGGGGCTCGTAGCCTTTATCTTCTGCCACGTTACTA 172010
|||||||||| ||| |||||||||| ||||| ||| || | |||||||| || || |
Sbjct 113845499 TCTCGCTGAAGGTGACCATGTTTTCTGGGCTTACAGCTTTCTTTTTCTGCCATGTCACAA 113845440
Query 172011 TTAAAACTTCTTTGTCGGTTTGAAGAGAGCATCTTAAAGAAGCAGGTGTGTTCAATAATT 172070
| | |||| | | | |||| ||||||||| |||| ||||||||||||| || |
Sbjct 113845439 TGAGGGCTTCCTGGGCATTTTGCAGAGAGCATTTTAAGGAAGCAGGTGTGTACAGCTGCT 113845380
Query 172071 CCCTTTCGTCTTGCGTTACCACCTG 172095
| ||||| || || || ||||| ||
Sbjct 113845379 CTCTTTCATCCTGGGTCACCACTTG 113845355
Score = 111 bits (122), Expect = 2e-19
Identities = 161/224 (72%), Gaps = 5/224 (2%)
Strand=Plus/Minus
Query 171503 ACAGTTTGTCTGATGTCTGTTACAGTCCCCAAGTGTAAGACTTTGCATATCACCTCCTCG 171562
|| ||||| | | ||| || |||||||||| ||| | || | ||| ||||||||||
Sbjct 113848213 ACGGTTTGCTTAAAGTCGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCT-- 113848156
Query 171563 TTTCCCACTTGACTTTTAGGATCTTTTACTTGAAGAATGCTAGTAACAGATGTAGTCCCG 171622
| ||||| ||| | ||||| ||||| | || || ||||| |||||||| || ||||||
Sbjct 113848155 -TCCCCACCTGATTCTTAGGGTCTTTGATATGGAGGATGCTGGTAACAGACGTGGTCCCG 113848097
Query 171623 TTACGATGTAGAACG-GTTTTAGTACTATTTTCTATTCCGGATCCGGCAACTTTCCAAAA 171681
|| | || ||| | || ||||||||||| || || || | | || ||||| ||
Sbjct 113848096 TTTGGGTG-AGACAGAGTCACTGTACTATTTTCAATCCCTGACCGAGGGACCTTCCAGAA 113848038
Query 171682 TATAACAGGAGCTGGTCTAGCAGTAGCAGAGCAAGTTATGTTTA 171725
| | || ||||| | ||||| ||||||||||| || ||||
Sbjct 113848037 GACCATGGGGGCTGGGCGGGCAGTGGCAGAGCAAGTGATATTTA 113847994
>seq235
Length=173266796
Score = 136 bits (150), Expect = 5e-27
Identities = 435/664 (66%), Gaps = 17/664 (3%)
Strand=Plus/Minus
Query 176887 TCCAGTTAAAGTATTGAAGATAAAGGGTGACGTTTTTATCGATGGCGTTGAGGTGCGAGG 176946
||||||||||||| ||| || | | |||||| |||| | || || | | |
Sbjct 98191569 TCCAGTTAAAGTAACTAAGGTATAACTTATTGTTTTTGTCGACTTCCTTCAGATACTTTG 98191510
Query 176947 CCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAAT 177006
| || || | || || | || || | ||| |||||||| | ||| | || | ||||
Sbjct 98191509 CTAGCTCACTGGGAGAGTTATAATCTTCCACATGAATGAATGAATCTGCTGGAATATAAT 98191450
Query 177007 TTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGATC 177066
| || || || || || |||| ||| || || | ||||| | || |||| || ||
Sbjct 98191449 TCTCATAGTTTTCCCTAGATGGTCCCAGAACAACAGGTACAGAGCCAGCCAGAAAAGCAT 98191390
Query 177067 GGTAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGAATT 177126
||| || ||||| || || || ||| |||| | || || ||||| | ||||| ||||
Sbjct 98191389 TGTATAGCTTTTCCGTGATGTAATCCTTGTGGATTGAATTTTCAAAGGAAAGATAAAATT 98191330
Query 177127 TACAGGAAGATA--GTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACTACGTT 177184
|||| | ||||| ||| || || || | | ||| | ||| ||||| | | | |
Sbjct 98191329 TACAAGTAGATATGGTA--GGAATCAAATTTTTATCATTGACATATTCTCCAAATGCTTG 98191272
Query 177185 CCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGA-TCTCACGT 177243
|||||| ||| || || ||| ||| || ||||| ||| || || || ||| | |
Sbjct 98191271 CCCGTAGGTATGGATTTCAATGCTTTTGCTTAGCTCATTGTAATA-CTTGACTCTGGCAT 98191213
Query 177244 GGTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTTTGC-GGGAACGGGA 177302
| || |||||| || || || |||||||| || || || |||||||| || ||
Sbjct 98191212 GCTCAGGGTTCCAGTTACTCACAACCCAGCACACCAA-TTTCTCTTTGCTTGGCAC---- 98191158
Query 177303 TTC-GATACTAATGCAGTGTCTCTGAGCGTTAGTGATCCATAGGGCACGTGAATATCCGA 177361
||| | || || | | | || | ||| | | ||||| ||||| || ||||| ||
Sbjct 98191157 TTCAAACACGAAGGGATTTGTGCTCACCGTCAAGAAGCCATAAGGCACTTGGATATCTGA 98191098
Query 177362 GTCGCGTCTGTACGTTAACGTGAGATTGAAAAGGTTTTCTATAC--CTTGTTTGAAGGGG 177419
|| || | ||| || | || || || || | || || || | || |||| |||
Sbjct 98191097 ATCACGGCGGTAAGTCAGAGTCAGGTTAAACAAGTGCTCAATGCCACTCTTTTG--GGGA 98191040
Query 177420 CTGTTACTGGGCGATTCTAAGTTCATCCATATCCACTTTTGAAAGGTTGGTCTGGGTTCC 177479
||| | | || ||||| || |||||||| ||||| || || |||| ||| || | || |
Sbjct 98191039 GTGTGAGTTGGTGATTCCAAATTCATCCAAATCCATTTCTGGAAGGGTGGCCTAGCTTGC 98190980
Query 177480 GTAGGTAGAGTATAAGGATCTATACTTATCTCTCTGTGGTGAAAGACTACGGCATTGGCT 177539
||||| | | |||| ||| || |||| ||| || | | || |||| || |
Sbjct 98190979 TGAGGTAAATTTGTCAGATCCCAACTGATGTCTCGGTGATGGATCAGAACTGCATGGGAT 98190920
Query 177540 TTGT 177543
||||
Sbjct 98190919 TTGT 98190916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578137643185600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |