Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq646 102 8e-17
seq638 100 3e-16
seq219 91.5 1e-13
seq168 89.7 5e-13
seq1 84.2 2e-11
>seq646
Length=133456746
Score = 102 bits (112), Expect = 8e-17
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
|||||||| ||||| || | | |||||||| || ||||||||||| || ||| ||
Sbjct 124982034 CAAGCGCAGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCG 124982093
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
|||||| |||||||| || | | |||||| | ||| || || ||||| ||||||||
Sbjct 124982094 TCCATCTTCCAGCTGTTTCCCAGCAAAGATTAACCTCTGCTGGTCAGGAGGGATGCCTTC 124982153
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
|| || || ||| || | | || | || || | |||||||| |||| ||
Sbjct 124982154 CTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCGAGGGT 124982213
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| || || |||||||| || || | ||| ||||||||
Sbjct 124982214 GATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 124982252
Score = 102 bits (112), Expect = 8e-17
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|||||||| || |||||||| || || ||| ||| |||||| |||||||| || | |
Sbjct 124982971 GACTCTTTCTGGATGTTGTAATCAGACAGGGTGCGCCCATCTTCCAGCTGTTTTCCAGCA 124983030
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || | ||| || || ||||| |||||||| ||||| || ||| || |
Sbjct 124983031 AAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCTTGGATCTTTGCCTTGACA 124983090
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || || | ||||| || |||| || | || |||||||||||||| ||
Sbjct 124983091 TTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTACCAGTCAGAGTCTTC 124983150
Query 132110 ATGAAAATCTGCAT 132123
| ||| ||||||||
Sbjct 124983151 ACGAAGATCTGCAT 124983164
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|||||||| || ||||||||||| || ||| || |||||| ||||| || |||| |
Sbjct 124982287 GACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTCCAGCTGCTTTCCGGCA 124982346
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| | | ||| || || ||||| |||||||| || || || ||| || |
Sbjct 124982347 AAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACG 124982406
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || || | ||||| || |||| || | || ||||||||||| || ||
Sbjct 124982407 TTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTACCAGTCAGGGTCTTC 124982466
Query 132110 ATGAAAATCTGCAT 132123
| ||| ||||||||
Sbjct 124982467 ACGAAGATCTGCAT 124982480
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|||||||| || ||||||||||| || ||| ||| ||| || ||||| || || | |
Sbjct 124982515 GACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCCTCCAGCTGCTTTCCAGCA 124982574
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| | | ||| || || ||||| |||||||| || || || ||| || |
Sbjct 124982575 AAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACA 124982634
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || || | ||||| || |||| || | || ||||||||||| || ||
Sbjct 124982635 TTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTACCAGTCAGGGTCTTC 124982694
Query 132110 ATGAAAATCTGCAT 132123
| ||| ||||||||
Sbjct 124982695 ACGAAGATCTGCAT 124982708
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|||||||| || ||||||||||| || ||| ||| |||||| ||||| || || | |
Sbjct 124982743 GACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTTCCAGCA 124982802
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| | | ||| || || ||||| |||||||| || || || ||| || |
Sbjct 124982803 AAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACA 124982862
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || || | ||||| || || | || | || ||||||||||| || ||
Sbjct 124982863 TTCTCGATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTACCAGTCAGGGTCTTC 124982922
Query 132110 ATGAAAATCTGCAT 132123
| ||| ||||||||
Sbjct 124982923 ACGAAGATCTGCAT 124982936
>seq638
Length=135235416
Score = 100 bits (110), Expect = 3e-16
Identities = 82/100 (82%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 147503 TGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGAT 147562
|||||| ||| ||||| | |||||||||||||||||| ||| ||||| || ||||| |
Sbjct 3886886 TGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCTGGT 3886827
Query 147563 TGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602
|||| |||||||| || | |||||| ||||||| |||||
Sbjct 3886826 TGCTCTTCCGATTACAGGAATCTTTGTAGAGCATATACGG 3886787
>seq219
Length=165317712
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| |||| || | | | ||||| || || ||||||||||| | || || |
Sbjct 62366591 CGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA 62366650
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| ||||| || || | | |||| || | ||| || || ||||| ||||||||||||
Sbjct 62366651 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTA 62366710
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| || || |||| | ||| | || || | ||||||||||| | || |
Sbjct 62366711 TCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATG 62366770
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || |||||||| || || | ||| ||||||||
Sbjct 62366771 GTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 62366805
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
|| ||||| |||| || | | | |||||||| || ||||||||||| | || ||
Sbjct 62366359 CAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCG 62366418
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
|||||| ||||| || || | | |||| || | ||| || || ||||| ||||||||
Sbjct 62366419 GCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTC 62366478
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
|||||| || || |||| | ||| | || || | |||||||| || | ||
Sbjct 62366479 TTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGAGT 62366538
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| || || || ||||| || || | ||| ||||||||
Sbjct 62366539 GATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 62366577
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| |||| || | | | ||||| || || ||||||||||| | |||| |
Sbjct 57062636 CGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACCGCCA 57062695
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| ||||| || || | | |||| || | ||| ||||| | || ||||||||||||
Sbjct 57062696 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGATCGTGGGGGATGCCTTCTTTA 57062755
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| || || |||| | ||| | || || | ||||||||||| | || |
Sbjct 57062756 TCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATG 57062815
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || || ||||| || || | ||| ||||||||
Sbjct 57062816 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 57062850
>seq168
Length=201391403
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| |||||||| |||||||| || ||||| |||||| ||||| || || | |
Sbjct 5653867 GACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATCTTCCAGCTGCTTGCCAGCA 5653808
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || | ||| ||||| ||||| || ||||| ||||| || || || |
Sbjct 5653807 AAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGTATCTTGGCCTTTACA 5653748
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | ||||| | || || || |||| || | || || || || || |||||
Sbjct 5653747 TTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTTCCCGTAAGGGTTTTC 5653688
Query 132110 ATGAAAATCTGCAT 132123
| ||||||||||||
Sbjct 5653687 ACGAAAATCTGCAT 5653674
>seq1
Length=228908639
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| |||||||| |||||||| || ||||| |||||| ||||| || || | |
Sbjct 172116144 GACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATCTTCCAGCTGCTTGCCAGCA 172116085
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || | ||| ||||| ||||| || ||||| ||||| || || || |
Sbjct 172116084 AAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACA 172116025
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | ||||| | || || | |||| || | || || || || || |||||
Sbjct 172116024 TTTTCTATCGTATCCGAGGGTTCAGCCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTC 172115965
Query 132110 ATGAAAATCTGCAT 132123
| ||||||||||||
Sbjct 172115964 ACGAAAATCTGCAT 172115951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476368658517960
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