Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq860 104 7e-19
seq638 104 7e-19
seq235 102 3e-18
seq698 98.7 3e-17
seq646 98.7 3e-17
>seq860
Length=57935654
Score = 104 bits (114), Expect = 7e-19
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 1183300 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 1183241
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 1183240 CCGGGTTTCGGC 1183229
>seq638
Length=135235416
Score = 104 bits (114), Expect = 7e-19
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 58710563 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 58710504
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 58710503 CCGGGTTTCGGC 58710492
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 58701704 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 58701645
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 58701644 CCGGGTTTCGGC 58701633
>seq235
Length=173266796
Score = 102 bits (112), Expect = 3e-18
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826
|||| ||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct 29437886 TGGCCGAAATAGCTCAGATGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 29437827
Query 2827 CCCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 29437826 TCCCGGGTTTCGGC 29437813
Score = 100 bits (110), Expect = 9e-18
Identities = 63/68 (93%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 29453456 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 29453397
Query 2829 CCGGGCTT 2836
||||| ||
Sbjct 29453396 CCGGGTTT 29453389
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 29614549 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 29614490
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 29614489 CCGGGTTTCGGC 29614478
Score = 93.3 bits (102), Expect = 1e-15
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATC-TAAAGGTCCCTGGTTCAAC 2827
|||||| ||||||||||||||||| |||||||||||||| ||||| |||||||||||||
Sbjct 29392145 GCTGAAATAGCTCAGTTGGGAGAGGGTTAGACTGAAGATCTTAAAGTTCCCTGGTTCAAC 29392086
Query 2828 CCCGGGCTTCAGC 2840
| ||| ||||||
Sbjct 29392085 ACAGGGTTTCAGC 29392073
Score = 86.0 bits (94), Expect = 2e-13
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832
|| |||||||| |||||||||||||||||||||||||||||||| |||||| | || ||
Sbjct 81087275 AAATAGCTCAGCTGGGAGAGCATTAGACTGAAGATCTAAAGGTCTCTGGTTTGATCCTGG 81087216
Query 2833 GCTTCAG 2839
| |||||
Sbjct 81087215 GTTTCAG 81087209
Score = 82.4 bits (90), Expect = 2e-12
Identities = 51/55 (93%), Gaps = 0/55 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823
|| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 29419953 GCCGAAATAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTT 29419899
>seq698
Length=97154659
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 77364988 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 77364929
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 77364928 CCGGGTTTCGGC 77364917
>seq646
Length=133456746
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 124999738 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 124999679
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 124999678 CCGGGTTTCGGC 124999667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15842542544595
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |