Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq168 279 6e-70
seq848 154 2e-32
seq1 145 9e-30
>seq168
Length=201391403
Score = 279 bits (308), Expect = 6e-70
Identities = 255/322 (79%), Gaps = 0/322 (0%)
Strand=Plus/Plus
Query 171069 CAGGTGGTGACCCAGGATGAGAGGGTGCTGCTGAACACGCCAGCCTCCCTGAAATGCTCC 171128
|| ||||||||||||||||| || | || |||| |||| || || ||| | ||||||||
Sbjct 113845355 CAAGTGGTGACCCAGGATGAAAGAGAGCAGCTGTACACACCTGCTTCCTTAAAATGCTCT 113845414
Query 171129 CTGCAGACTTCTCAGGAGGTGCTGATTGTCACCTGGCAGAAAATCAAGCCCACCATTCCA 171188
||||| | | | ||||| | || ||||| || |||||||||| || | | |||
Sbjct 113845415 CTGCAAAATGCCCAGGAAGCCCTCATTGTGACATGGCAGAAAAAGAAAGCTGTAAGCCCA 113845474
Query 171189 GAGAACATGATAACTTTTAGCAAAGACCACGGGGTGGTGGTCCAGCCGGCTTATAAGGAC 171248
|| |||||| | || || ||| | |||| ||||||||| ||||||| || |||||||||
Sbjct 113845475 GAAAACATGGTCACCTTCAGCGAGAACCATGGGGTGGTGATCCAGCCTGCCTATAAGGAC 113845534
Query 171249 AAGATAAACATCACCCAGCTTGGACTCCAAAACTCAACCATCACTTTTTGGAATACCACC 171308
||||||||||| |||||||| ||||||||||||||||||||||| || ||||||| ||||
Sbjct 113845535 AAGATAAACATTACCCAGCTGGGACTCCAAAACTCAACCATCACCTTCTGGAATATCACC 113845594
Query 171309 TTAGAGGACGAGGGGTGCTACAACTGCCTCTTTAACACCTTTGGGTCTGGGAAAATCTCG 171368
| ||||| || ||||| |||| || ||||| || |||||||| | |||||| |||||
Sbjct 113845595 CTGGAGGATGAAGGGTGTTACATGTGTCTCTTCAATACCTTTGGTTTTGGGAAGATCTCA 113845654
Query 171369 GGGGTGGCCTGCCTCACCCTCT 171390
|| ||||||||||||| |||
Sbjct 113845655 GGAACGGCCTGCCTCACCGTCT 113845676
Score = 109 bits (120), Expect = 6e-19
Identities = 119/158 (75%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669
|||||| |||||||| | || || | ||||||| ||||| | | |||||||
Sbjct 47156762 GTACTCCCTGGTGTTCACTGTGGGCCTCTTGGGCAATGTGGTGGTGGTGATGATCCTCAT 47156821
Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729
||| |||| ||||||| | || ||||||||||||| |||| ||||||||||| || ||
Sbjct 47156822 AAAATACAGGAGGCTCCGAATTATGACCAACATCTACCTGCTCAACCTGGCCATTTCGGA 47156881
Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACT 8767
|||||| | | |||||||| || || ||||| ||||
Sbjct 47156882 CCTGCTCTTCCTCTTCACCCTTCCGTTCTGGATCCACT 47156919
Score = 100 bits (110), Expect = 3e-16
Identities = 117/158 (74%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669
|||||| |||| ||| | |||| || |||| || ||||||| |||| ||||| |
Sbjct 47107441 GTACTCCTTGGTATTTGTCATTGGCCTGGTTGGAAACATCCTGGTGGTCCTGGTCCTTGT 47107382
Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729
| ||||||||||| | | |||||||| ||||| ||| | ||||||||| || |||
Sbjct 47107381 GCAATACAAGAGGCTAAAAAACATGACCAGCATCTACCTCCTGAACCTGGCCATTTCTGA 47107322
Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACT 8767
|||||| | | ||||| || ||||| |||||| |||
Sbjct 47107321 CCTGCTCTTCCTGTTCACGCTTCCCTTCTGGATTGACT 47107284
Score = 89.7 bits (98), Expect = 6e-13
Identities = 114/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 8611 TACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATA 8670
||||| |||||||| | ||||| | | ||||| ||||| ||||| |||| |||
Sbjct 47264141 TACTCACTGGTGTTCATCTTTGGTTTTGTGGGCAACATGCTGGTCATCCTCATCCTGATA 47264200
Query 8671 AAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGAC 8730
|| | ||| ||||| | || |||||| |||||| |||| ||||||||||| | ||||
Sbjct 47264201 AACTGCAAAAGGCTGAAGAGCATGACTGACATCTACCTGCTCAACCTGGCCATCTCTGAC 47264260
Query 8731 CTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACT 8767
||| | | || | || ||||||| ||| |||||
Sbjct 47264261 CTGTTTTTCCTTCTTACTGTCCCCTTCTGGGCTCACT 47264297
>seq848
Length=78004504
Score = 154 bits (170), Expect = 2e-32
Identities = 133/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041
||| ||||| || | ||| || | |||||| |||||||| | ||||||||| ||||||||
Sbjct 14422029 CTTCAGGCCCGTGATGTGTGCAATCATGTATGTGAGCAGGGCGTAGCTGGCGATGTTGAA 14422088
Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101
|| || || ||||||||||| ||||| ||||||||||||||||| || ||||| | ||
Sbjct 14422089 AGGCACACCGAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTT 14422148
Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146
|||| || |||||||| ||| ||||| || |||||||||||
Sbjct 14422149 CACCACATAGAACTGGCAGAGGGCATGGCATGGAGGCAGCGCCAT 14422193
Score = 86.0 bits (94), Expect = 7e-12
Identities = 115/160 (72%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342
|||||||| ||||||||||||||||| || ||||| |||| ||| || | ||||
Sbjct 14428847 GCCCCAAAATGCCTCCACTGGAAGCCATAAACTGGGCCCAAGTCCCCTTCTTCTCTGGTG 14428906
Query 147343 GAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCC 147402
||||| ||| | | | ||| || | || || | ||| |||||||| |||||||
Sbjct 14428907 GAGAATCCCAGGCTGTCCAAAAAGTCTCGAGATCCATTGGCATCCCAGATTTTCACTCCC 14428966
Query 147403 TTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGA 147442
|||| || ||||| |||| | ||||| ||| ||| ||
Sbjct 14428967 TTGGAAGACAGCTCTTTAGCATTTGTGGATCCCTGGAAGA 14429006
>seq1
Length=228908639
Score = 145 bits (160), Expect = 9e-30
Identities = 131/167 (78%), Gaps = 12/167 (7%)
Strand=Plus/Minus
Query 178231 AGGGTTACTTGGGTTGCCAGGCCTTGTCAGAGATGATTCAGTTTTACTTGGAGGAGGTGA 178290
|||||||| |||||||||| |||||||| |||||||| ||||||||| ||||||||||||
Sbjct 186547703 AGGGTTACCTGGGTTGCCAAGCCTTGTCTGAGATGATCCAGTTTTACCTGGAGGAGGTGA 186547644
Query 178291 TGCCTCAGGCCGAGAATCACAGCGGGGGTGGAGGCCCGGACATTAAGGAGCATGTAAACT 178350
|||| || || ||||| || || ||| ||||| |||| |||||| ||||
Sbjct 186547643 TGCCCCAAGCTGAGAACCA------------AGACCCAGACATCAAGGCGCATGTGAACT 186547596
Query 178351 CTCTGGGGGAAAAGCTAAAGACCCTTAGAGTGAGGCTGCGGCGATGT 178397
| || ||||| || || |||||||| || ||||||| ||||| |||
Sbjct 186547595 CCCTCGGGGAGAATCTGAAGACCCTCAGGCTGAGGCTACGGCGCTGT 186547549
Score = 91.5 bits (100), Expect = 2e-13
Identities = 67/78 (86%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 178462 AGCTTCAAGAAAAGGGTGTTTACAAAGCTATGAGTGAGTTTGATATTTTTATTAACTACA 178521
|||| ||||| || || || |||||||| |||||||||||||| || || || |||||||
Sbjct 186545372 AGCTCCAAGAGAAAGGCGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 186545313
Query 178522 TAGAAGCTTACATGACAA 178539
||||||| ||||||||||
Sbjct 186545312 TAGAAGCCTACATGACAA 186545295
Score = 84.2 bits (92), Expect = 3e-11
Identities = 55/61 (90%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 178173 CAAATGAAGGACCAGCTGGACAACATGTTGTTAAATGGGTCCCTGCTGGAAGACTTTAAG 178232
||||||||||| |||||||||||| |||||||||| | |||| ||||||| |||||||||
Sbjct 186548057 CAAATGAAGGATCAGCTGGACAACTTGTTGTTAAAGGAGTCCTTGCTGGAGGACTTTAAG 186547998
Query 178233 G 178233
|
Sbjct 186547997 G 186547997
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583191070250400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |