Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq168 123 2e-23
seq1 123 2e-23
seq646 122 8e-23
seq773 114 1e-20
seq219 111 1e-19
seq931 100 3e-16
seq885 93.3 4e-14
seq235 89.7 5e-13
seq389 82.4 7e-11
>seq168
Length=201391403
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | |||||||| | ||| | ||| |||||||||||| ||||| || | |
Sbjct 5653900 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGAC 5653841
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || ||||||||||| || ||||| |||| | |||||| || | ||||
Sbjct 5653840 AAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGA 5653781
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||||| ||| ||||| ||| | | || | | ||| || | ||| |||
Sbjct 5653780 ATTCCTTCCTTATCCTGTATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACC 5653721
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740
|| | ||||| || || ||||| | |||||||| || ||||||||| ||
Sbjct 5653720 TCGAGGGTGATGGTCTTTCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 5653670
>seq1
Length=228908639
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | |||||||| | ||| | ||| |||||||||||| ||||| || | |
Sbjct 172116177 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGAC 172116118
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || ||||||||||| || ||||| |||| | |||||| || | ||||
Sbjct 172116117 AAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGA 172116058
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||||| ||| |||||| ||| | | || | | ||| || | ||| ||
Sbjct 172116057 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAGCC 172115998
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737
|| | ||||| || || ||||| | |||||||| || |||||||||
Sbjct 172115997 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATT 172115950
>seq646
Length=133456746
Score = 122 bits (134), Expect = 8e-23
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || |||||||| || | || ||| ||| | || ||||||||||| || |||||
Sbjct 124982517 CTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCCTCCAGCTGCTTTCCAGCAAA 124982576
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||||| ||||||||| | ||| | || |||||||| ||||||| ||| | | |
Sbjct 124982577 GATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATT 124982636
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | || ||||| | ||||| || ||||| |||| || |||||
Sbjct 124982637 CTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTACCAGTCAGGGTCTTCAC 124982696
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 124982697 GAAGATCTGCAT 124982708
Score = 122 bits (134), Expect = 8e-23
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || |||||||| || | || ||| ||| | || ||||||||||| || |||||
Sbjct 124982745 CTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTTCCAGCAAA 124982804
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||||| ||||||||| | ||| | || |||||||| ||||||| ||| | | |
Sbjct 124982805 GATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATT 124982864
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | || ||||| | ||||| || ||||| |||| || |||||
Sbjct 124982865 CTCGATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTACCAGTCAGGGTCTTCAC 124982924
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 124982925 GAAGATCTGCAT 124982936
Score = 120 bits (132), Expect = 3e-22
Identities = 153/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
||||| || | ||| ||| || || ||||||||||| | || ||| ||| | || ||
Sbjct 124982955 CACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGACAGGGTGCGCCCATCTTC 124983014
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
|||||| || || ||||| |||| || ||||||||| | ||| | || ||||| ||
Sbjct 124983015 CAGCTGTTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCTTG 124983074
Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
||||||| ||| | | | | | ||||| || | || ||||| | ||||| || ||
Sbjct 124983075 GATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTT 124983134
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCATT 35737
||| |||| ||| ||||| || |||||||||
Sbjct 124983135 ACCAGTCAGAGTCTTCACGAAGATCTGCATT 124983165
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
||||| || | ||| ||| || || |||||||| || | || ||| || | || ||
Sbjct 124982271 CACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTC 124982330
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
||||||||| || ||||| ||||||| ||||||||| | ||| | || ||||||||
Sbjct 124982331 CAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTG 124982390
Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
||||||| ||| | | | | ||||| || | || ||||| | ||||| || ||
Sbjct 124982391 GATCTTTGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTT 124982450
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
||| |||| || ||||| || ||||||||||
Sbjct 124982451 ACCAGTCAGGGTCTTCACGAAGATCTGCATTC 124982482
>seq773
Length=81384781
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | |||||||| ||||| ||| |||||||||| | ||||| || | |
Sbjct 51769183 CCACCACGAAGTCTCAACACAAAATGAGGAGTAGACTCCTTTTGACTATTGTAGTCAGAC 51769242
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || | | || ||||||||||| || ||||| |||| | |||||| || | ||||
Sbjct 51769243 AAAGTACATCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGA 51769302
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||||| ||| |||||| ||| | | || | | ||| || | ||| ||
Sbjct 51769303 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAGCC 51769362
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740
|| | ||||| || || ||||| | |||||||| || ||||||||| ||
Sbjct 51769363 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 51769413
>seq219
Length=165317712
Score = 111 bits (122), Expect = 1e-19
Identities = 142/196 (72%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || | | || || | || ||||||||||| || |||||
Sbjct 62366842 CTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 62366901
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||||||||| | |||| || ||||| ||| |||||| ||||| | |
Sbjct 62366902 GATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATCTTGGCCTTCACATT 62366961
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | | ||||| || | |||||||| | ||||| || || || || | ||||||||
Sbjct 62366962 TTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTTTTCAC 62367021
Query 35725 AAATATCTGCATTCTG 35740
|| ||||||||| ||
Sbjct 62367022 GAAGATCTGCATTTTG 62367037
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || | | || || | || ||||||||||| || |||||
Sbjct 62366614 CTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 62366673
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||||||||| | ||| | || || || ||| |||||| ||||| | |
Sbjct 62366674 GATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATT 62366733
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | | ||||| || | ||||| |||| ||||| || || || |||| || |||||
Sbjct 62366734 TTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 62366793
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 62366794 GAAGATCTGCAT 62366805
Score = 98.7 bits (108), Expect = 9e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || |||||||| || | | || || | || ||||||||||| || |||||
Sbjct 62366386 CTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 62366445
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||||||||| | ||| | || || || || |||||| ||||| | |
Sbjct 62366446 GATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTATCTTGGATCTTGGCCTTCACATT 62366505
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | | ||||| || | |||||||||| ||||| || || || |||| || |||||
Sbjct 62366506 TTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTGCCGGTCAGGGTCTTCAC 62366565
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 62366566 GAAGATCTGCAT 62366577
>seq931
Length=156331669
Score = 100 bits (110), Expect = 3e-16
Identities = 157/225 (70%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 35511 CACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCA 35570
|||||| | |||||||| | ||| | ||| |||||||||||||||| | || | ||
Sbjct 3273478 CACCACAAAGTCTCAACACAAGATGAAGAGTAGGCTCCTTTTGAATGTTGCAGTCAGACA 3273419
Query 35571 AGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAA 35630
| || || | || ||||| ||||| || ||||| |||| | ||||| || | |||||
Sbjct 3273418 AAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAA 3273359
Query 35631 CGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCT 35690
| ||||| ||| |||||| ||| | | || | | || || | ||| ||||
Sbjct 3273358 TTCCTTCCTTATCCTAGATCTTGGCCTTTACATTTTCTATCGCATCTGAGGGTTCAACCT 3273299
Query 35691 CCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735
| | ||||| || || ||| | | |||||||| || |||||||
Sbjct 3273298 CAAGGGTGATGGTCTTCCCCCTTAGGGTTTTCACGAAAATCTGCA 3273254
>seq885
Length=63231202
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | |||||||| | ||| | ||| |||||||||||||||||| || | |
Sbjct 17717385 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAC 17717326
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| | | | || ||||| ||||| | ||||| |||| | | ||| || | ||||
Sbjct 17717325 AAAGCACATACATCCTCCAGTTGCTTGCTAGCAAAGATCAGTCTTTACTGATCAGGAGGA 17717266
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | | ||| ||| | |||| ||| | | || | | ||| || | ||| ||
Sbjct 17717265 ATTCCTTACTTATCCTGGGTCTTGGCCTTTATATTTTCTATCGTTTCTGAGGGTTCAGCC 17717206
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740
|| | ||||| || || || || | ||||||||||| ||||||||| ||
Sbjct 17717205 TCGAGGGTGATGGTCTTCCCTGTGAGGGTTTTCACAAAAATCTGCATTTTG 17717155
>seq235
Length=173266796
Score = 89.7 bits (98), Expect = 5e-13
Identities = 162/237 (68%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 35504 TTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAA 35563
|||| |||||||| | |||||||| | ||| | ||| ||||||||||| ||||
Sbjct 115827926 TTATCACCACCACGAAGTCTCAACACAAGATGAAGAGTAGAATCCTTTTGAATACTGTAG 115827867
Query 35564 TCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCC 35623
|| | ||| || | | || ||||| ||||| || ||||| |||| | ||||| ||
Sbjct 115827866 TCAGACAAAGTACATCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGTCTTTGCTGATCA 115827807
Query 35624 GAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGAT 35683
| ||||| | ||||| ||| |||||| ||| | | || | | || || | |
Sbjct 115827806 GGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGT 115827747
Query 35684 TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740
|| |||| | ||||| || || || | | |||||||| || ||||||||| ||
Sbjct 115827746 TCAGCCTCGAGGGTGATGGTCTTCTCCATAAGAGTTTTCATGAAAATCTGCATTTTG 115827690
>seq389
Length=121655618
Score = 82.4 bits (90), Expect = 7e-11
Identities = 138/196 (70%), Gaps = 3/196 (2%)
Strand=Plus/Plus
Query 35549 TTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATC 35608
|| || |||||||| || | | | || | || |||||||| || | |||||||||
Sbjct 27659263 TTCTGGATGTTGTAGTCTGAGAGAATGCGGCCATCCTCCAGCTGTTTGCTGGCAAATATC 27659322
Query 35609 AACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGC 35667
| ||||||||||| | || | | |||||||| | ||| ||| || || | | | |
Sbjct 27659323 AGACGCTGCTGGTCAGGGGGTATACCCTCCTTGT-CTTGAATTTTCGCATTGACATTCTC 27659381
Query 35668 CACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727
| ||||| || | || ||||| | ||||| || || ||||| | || ||||||||
Sbjct 27659382 AATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACAAA 27659441
Query 35728 TATCTGCAT-TCTGTG 35742
|||||||| ||||||
Sbjct 27659442 GATCTGCATCTCTGTG 27659457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450564196771880
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