Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq931 356 3e-93
seq39 129 8e-25
seq1 129 8e-25
seq377 116 5e-21
seq638 109 8e-19
seq860 87.8 2e-12
>seq931
Length=156331669
Score = 356 bits (394), Expect = 3e-93
Identities = 641/934 (69%), Gaps = 12/934 (1%)
Strand=Plus/Plus
Query 39270 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTT 39326
|||| |||||| ||| ||| | |||| ||| |||| | | | ||| |||| |||
Sbjct 44829964 TTTAGAAGTCAGCATTTAAGGTAAAAGAATTCTCTTTTGGACTTAACACCACTCTCATCC 44830023
Query 39327 TTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 39386
| || || || || || | |||| || || ||||| ||| || ||| ||||| |
Sbjct 44830024 TCTGATACTCGCCTACTCTCCTCTCAAAGAAGTTAGT-----CTTTCAGTGAAATATTCT 44830078
Query 39387 CCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCA 39446
|| | || ||||| || | | | | || |||| || | ||| || |
Sbjct 44830079 CCGTAAAGTCAAATGGGCTCTCTACTCCGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 44830138
Query 39447 ATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 39506
||| ||||| ||||| || |||||| ||||| | |||||||| || ||||| |
Sbjct 44830139 GTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 44830198
Query 39507 TAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCG 39566
| || || | ||||| || || || |||| ||| || | || || | | |||||
Sbjct 44830199 TCACAGGCAAGGCCTCGGTGAGGAATTCTTGTTCTATCTGAACAGCATTGATAATTATTT 44830258
Query 39567 ATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAGT 39626
| | ||| ||| || ||| || | | ||||| ||||| ||||| || || |
Sbjct 44830259 CTCTCACTTTCTCCTCCGATGGTTTGTGTACCAGGTGTTTGAACATCAAGCAAGCAAAAT 44830318
Query 39627 CACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTA 39686
|||| |||| ||||||||||| ||||| | ||| || ||||| ||||| ||||||||
Sbjct 44830319 CACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCG 44830378
Query 39687 GACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTA 39746
| || || || |||||||| ||||| | |||||||| ||||||||||||||||||||||
Sbjct 44830379 GTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCTA 44830438
Query 39747 CTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT---ATCCACTTCT 39803
|||| || || || |||| || || || | | || || | ||||| |
Sbjct 44830439 CTGCAGCGAAGGCTACAACATGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGCGCA 44830498
Query 39804 GTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAAT 39863
|||||||| || |||||||| ||||||||||| ||| | || ||||| |||||| | |
Sbjct 44830499 AGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTT-CAATGGCATTGAAGAGAAATT 44830557
Query 39864 GTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGA 39923
|||| | |||||| | || || || || | |||||||||||||| ||||| |
Sbjct 44830558 CCCTTTCTTTGAGATCTTTGATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTA 44830617
Query 39924 TGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTG 39983
||||||| || || || || || || || ||||| | ||||| ||||| || || |
Sbjct 44830618 TGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTATTT 44830677
Query 39984 AACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCA 40043
| ||||| ||| ||||||||||||| ||||| |||||||| || ||||| || |||
Sbjct 44830678 GGCTAAATCGCTCCACCAAATTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAACCA 44830737
Query 40044 ATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTT 40103
||||| ||||||||| | || ||||| ||| | ||||| || || |
Sbjct 44830738 GAACATGGGATATAAAATATCTCTCCTCGGGCTTCAGGGGTTCCCAGTGCCGAATGTCCT 44830797
Query 40104 TTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCC 40163
| || | || || || || | ||||| || || ||||| ||||| || ||||| | ||
Sbjct 44830798 TGGACAGGTCCACCTCCTCGGTGGTCCAGAAGGAAGCCTCCGCCTTCTTATACATCTGCC 44830857
Query 40164 ATATATCACGATATTGTATTGGAAAAATAACAAA 40197
| |||||| | || | || || || || |||||
Sbjct 44830858 AGATATCATGGTACTCGATGGGGAAGATGACAAA 44830891
Score = 203 bits (224), Expect = 4e-47
Identities = 390/568 (69%), Gaps = 14/568 (2%)
Strand=Plus/Minus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
||| || |||| ||| |||| |||||||| || ||||| | ||| || |||||||||||
Sbjct 144506197 GCAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAG 144506138
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
|||||||| || || | || |||||||| ||||| |||||||| |||||||||||
Sbjct 144506137 GCCAGGCATCAGTCCTTGTTTCTTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGAA 144506078
Query 39736 GATGCCTTCTACTGCTGCAA-------ATGCAACAAG-TCTCTCTCCGTAACTTGTATCA 39787
| ||| ||| | |||| |||||||| | |||| | |||| | | |
Sbjct 144506077 GGTGCTTTCCGCCAGGGCAAAGGCTGCATGCAACACGTTCTCCATGGGTAATGTCT-TTG 144506019
Query 39788 TTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATA 39847
|| ||||| | ||||| | || |||||||| |||| |||||| ||||| ||
Sbjct 144506018 TTCCCAATCCAACACAAGACCCAACCTGCCTTCTTCTTGACAC-AGGCATCGTTTCAATG 144505960
Query 39848 GCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTA 39907
||| | |||||| | | |||| | |||||||| |||||| || || | ||| ||
Sbjct 144505959 GCACTGAAGAGAAATTCCCTTTCTTTGTTATCTTTA--ATATGTGTCAATAAGGAGATTA 144505902
Query 39908 TACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCA 39967
| ||||| |||| |||||||| || || || || || || || || || | |||
Sbjct 144505901 TTTATTTCAGAATATATGTTTTCTATAGCAATTTGGAAGCCATAGAAGCAGGAGGTTTCT 144505842
Query 39968 GTAATTTGTACCTC-TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACT 40026
||||| || || || ||||| |||| |||| | || ||||||| | ||| |||||||
Sbjct 144505841 GTAATCTGAACTTCTTGAAC-AAATTGTTCCACGAAGTTTTCATCTATTATCCCATCACA 144505783
Query 40027 AGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATT 40086
|| || || || |||| | ||| ||||||||| ||| || || ||| |
Sbjct 144505782 TGCTGCGAAGAAAGCCAGAATATGGGATATAAAATATCTTTACTCAGGCTTCAGGGCTTC 144505723
Query 40087 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGC 40146
||||| || || || || | || || || | || |||| || || ||||| |
Sbjct 144505722 CCAGTGCCAAATGTCCTTGGACAGGTCCACCTCCTGGGCCATCCAGAAAGAAACCTCTAC 144505663
Query 40147 CTTTTTGTACATGTTCCATATATCACGA 40174
|| || ||||| ||||| |||||| ||
Sbjct 144505662 TTTCTTTTACATTTTCCAAATATCATGA 144505635
>seq39
Length=107640188
Score = 129 bits (142), Expect = 8e-25
Identities = 104/126 (83%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698
|||||||||| ||||| | ||| |||||||||||||| || ||||| || || || || |
Sbjct 97368599 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCT 97368658
Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758
||||||| ||||| | |||||||| || |||||||| |||||||| ||||| ||||| |
Sbjct 97368659 TGAGCCAGAATATCGACGCAAAAGAACCGGAAAAGAAAATGCCTTCCACTGCAGCAAAGG 97368718
Query 39759 CAACAA 39764
| ||||
Sbjct 97368719 CTACAA 97368724
>seq1
Length=228908639
Score = 129 bits (142), Expect = 8e-25
Identities = 174/242 (72%), Gaps = 3/242 (1%)
Strand=Plus/Plus
Query 39820 CTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATC 39879
|||||| |||||||| |||||| || | || |||||| | | |||| | |||
Sbjct 140322428 CTTCTTGACACAAGG---TGTTTCAATGGTGTTGAAGAGAAATTCCCTTTCTTTGGAATC 140322484
Query 39880 TTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCAT 39939
||| | || || || || | |||||||||||||| ||||| ||||||| || || ||
Sbjct 140322485 TTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTGTGTTTTCCATGGCAAT 140322544
Query 39940 CTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGC 39999
|| || | || ||||| | ||||| ||||| || || ||| | ||||| ||| |
Sbjct 140322545 TTGGAAGTCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTCCAC 140322604
Query 40000 CAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAA 40059
||| |||||||| ||||| |||||||| || ||||| || |||| ||| | |||||
Sbjct 140322605 CAAGTTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAGCCAGAACACGGGATATAAA 140322664
Query 40060 AT 40061
||
Sbjct 140322665 AT 140322666
>seq377
Length=146757320
Score = 116 bits (128), Expect = 5e-21
Identities = 106/134 (79%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700
|||||||| || || | ||| || ||||| |||||||| ||||| ||||| | ||| ||
Sbjct 103162977 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCTTT 103163036
Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760
||||| ||||| |||||||||||||| || ||||| | |||||||| || ||||| ||
Sbjct 103163037 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCAAAGGCC 103163096
Query 39761 ACAAGTCTCTCTCC 39774
|| | ||| || ||
Sbjct 103163097 ACCACTCTTTCCCC 103163110
>seq638
Length=135235416
Score = 109 bits (120), Expect = 8e-19
Identities = 125/168 (74%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 70334 CACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAA 70393
|||| || | ||| |||||||| ||||| || || || | || || |||||||| || |
Sbjct 3869306 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCGATCCTGGCTGCCAGGA 3869247
Query 70394 TAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTA 70453
||||||||||||| || | ||||| | || || ||| |||| ||||| || |||||||
Sbjct 3869246 TAGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 3869187
Query 70454 ATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 70501
||| | || || || || | || | ||||| || ||||||||||
Sbjct 3869186 GTTCCACTGTGGTGACCCCACTGTACAAGCCTTGGATTACTTTCATGG 3869139
Score = 89.7 bits (98), Expect = 7e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654
||||||||||| || ||||| |||||||||||||| | || |||||||||| | |
Sbjct 3884843 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTGC 3884784
Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714
||||| |||||||| || || || | ||| || || || | || || ||||||| ||
Sbjct 3884783 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCAAGGC 3884724
Query 69715 TCTAGATATATCGC 69728
|| || || || ||
Sbjct 3884723 TCCAGGTAAATAGC 3884710
>seq860
Length=57935654
Score = 87.8 bits (96), Expect = 2e-12
Identities = 184/268 (69%), Gaps = 10/268 (4%)
Strand=Plus/Minus
Query 37338 TTATTTCAGTCCTGTTGATCCAAACCCT--TGAGCTCCTCTATCTGTACCATCTAGAGAT 37395
||| ||| ||| || || ||||| ||| ||| | ||| | ||| |||| | || |
Sbjct 51798151 TTAATTCTTTCCGGTAGAGCCAAAACCTCCTGAACCCCTTTTGGTGT--CATCCAAAGCT 51798094
Query 37396 TGTACTTCATTCAGATCAGGAT-AATATATACGTTGATAGATTAGCTGAGCTATTCTATC 37454
|| ||||| | | || |||| || | || |||| | | || ||||| || |||| |||
Sbjct 51798093 TGAACTTCTTCTATTTCTGGATTAAAAAATCCGTTCACAAATGAGCTGTGCAATTCGATC 51798034
Query 37455 GCCCGTATTT-ATTTTAAAATTACATTTTCCATTATTTATCAGAATGACTCCAATATTCC 37513
|| | ||| | || ||| || ||| | | ||| | || | || |||| ||| |
Sbjct 51798033 ACCTTTTTTTGACTTCAAACTTTTCTTTGCAAAAATTAAAGAGTACAACACCAACATTTC 51797974
Query 37514 CCCTATAATCTTCATCGATTACTCCGCCTCCTACATCAATA---CCTTTTAGAGACAAAC 37570
| |||||||||||||| | || || |||||||||||| | |||| || ||| |
Sbjct 51797973 CTCTATAATCTTCATCTGTGACACCAGCTCCTACATCAACAAAGTGTTTTGCAGCCAAGC 51797914
Query 37571 CCGATCTAGGAGCTATTCTTCCATAACA 37598
| || || ||||||| || |||||||||
Sbjct 51797913 CAGACCTTGGAGCTACTC-TCCATAACA 51797887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686559240698040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |