Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12- 19] 40,711 sequences; 3,063,362,794 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq168 87.8 2e-12 seq1 87.8 2e-12 >seq168 Length=201391403 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTC 27094 ||| || | ||| | ||||| || ||||||||||||||||| || | || | || Sbjct 5653886 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 5653827 Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154 ||| ||||| || || || | || || | ||| ||||| || || | || || ||||| Sbjct 5653826 TTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 5653767 Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214 |||||| || | |||||| || || | || |||||| || || || || | Sbjct 5653766 CTGTATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 5653707 Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || |||||||| || || ||||| Sbjct 5653706 CTTTCCCGTAAGGGTTTTCACGAAAATCTGCAT 5653674 >seq1 Length=228908639 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTC 27094 ||| || | ||| | ||||| || ||||||||||||||||| || | || | || Sbjct 172116163 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 172116104 Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154 ||| ||||| || || || | || || | ||| ||||| || || | || || ||||| Sbjct 172116103 TTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 172116044 Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214 ||||||| || | |||||| || || | || |||| | || || || || | Sbjct 172116043 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAGCCTCGAGGGTGATGGT 172115984 Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || |||||||| || || ||||| Sbjct 172115983 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 172115951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424723562290632