Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq848 159 3e-34
seq27197 82.4 7e-11
>seq848
Length=78004504
Score = 159 bits (176), Expect = 3e-34
Identities = 132/161 (82%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|| || |||||||| |||||||| ||||| || || |||||||| ||||| || | |||
Sbjct 14422045 TGTGCAATCATGTATGTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGCACACCGAGGCCC 14422104
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739
||||||||||||| || || ||||||||||||||||| | ||| | || ||||| |||
Sbjct 14422105 ATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACCACATAGAACTGG 14422164
Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
||||||| ||||| || || |||||||||||||| |||||
Sbjct 14422165 CAGAGGGCATGGCATGGAGGCAGCGCCATCAGAGGAAGATC 14422205
Score = 159 bits (176), Expect = 3e-34
Identities = 132/161 (82%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624
||||| |||||||||||||| || || ||||| |||||||||| ||||| || | |||
Sbjct 14422205 GATCTTCCTCTGATGGCGCTGCCTCCATGCCATGCCCTCTGCCAGTTCTATGTGGTGAAC 14422146
Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684
| ||||||||||||||||| || || |||||||||||||||| | || ||||| |||
Sbjct 14422145 AGTGAGCTGTCCTGCCAGCTGTACCAGAGATCGGGAGACATGGGCCTCGGTGTGCCTTTC 14422086
Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725
||||| || || ||||| |||||||| |||||||| || ||
Sbjct 14422085 AACATCGCCAGCTACGCCCTGCTCACATACATGATTGCACA 14422045
Score = 107 bits (118), Expect = 2e-18
Identities = 116/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
|| || |||||||| || ||||||||||| || || || ||||||||||| || || ||
Sbjct 14428841 TATTCTGCCCCAAAATGCCTCCACTGGAAGCCATAAACTGGGCCCAAGTCCCCTTCTTCT 14428900
Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
| | | ||| ||| | |||||| |||||||||||| || | || |||||||| |||
Sbjct 14428901 CTGGTGGAGAATCCCAGGCTGTCCAAAAAGTCTCGAGATCCATTGGCATCCCAGATTTTC 14428960
Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGG 7052
|| ||| ||| || ||||| || | || ||||
Sbjct 14428961 ACTCCCTTGGAAGACAGCTCTTTAGCATTTGTGG 14428994
Score = 107 bits (118), Expect = 2e-18
Identities = 116/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 34293 CCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTC 34352
|||| || | || ||||| || ||| ||| ||||| |||||||| || | || ||||
Sbjct 14428994 CCACAAATGCTAAAGAGCTGTCTTCCAAGGGAGTGAAAATCTGGGATGCCAATGGATCTC 14428935
Query 34353 GAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCT 34412
|||||||| |||||| | ||| ||| | | | || || || ||||||||||| || |
Sbjct 14428934 GAGACTTTTTGGACAGCCTGGGATTCTCCACCAGAGAAGAAGGGGACTTGGGCCCAGTTT 14428875
Query 34413 ACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446
| || ||||||||||| || |||||||| || ||
Sbjct 14428874 ATGGCTTCCAGTGGAGGCATTTTGGGGCAGAATA 14428841
>seq27197
Length=2000
Score = 82.4 bits (90), Expect = 7e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 6785 GGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATC 6844
|| ||||| |||||||| | ||| ||||||||||||||||| || | |||||| |||
Sbjct 1124 GGATTCCAAGCGCACATGATGATTCTTCTGTCATCAGGGTTGGTTTTGATGGTGTCAATC 1183
Query 6845 ACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTC 6882
|| ||||| ||||| |||||||||| ||||| ||
Sbjct 1184 ACTCTTTGCAGTTGGTCAACTCCCTGTCCTGAATAATC 1221
Score = 82.4 bits (90), Expect = 7e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 34463 GACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGAAC 34522
|| ||||| |||||||||| ||||| ||||| ||||| |||||| | || |||
Sbjct 1221 GATTATTCAGGACAGGGAGTTGACCAACTGCAAAGAGTGATTGACACCATCAAAACCAAC 1162
Query 34523 CCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCC 34560
|||||||||||||| ||| | |||||||| ||||| ||
Sbjct 1161 CCTGATGACAGAAGAATCATCATGTGCGCTTGGAATCC 1124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448034284867920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |