Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq389 91.5 1e-13
seq377 89.7 4e-13
seq646 87.8 2e-12
seq168 82.4 7e-11
>seq389
Length=121655618
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 39057 GCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGC 39116
||| |||| || | | | ||||| || | ||| || ||| || || || || || |
Sbjct 27659223 GCCACCTCGTAGGTGCAGCACCAGGTGCGGGGTGGGCTGTTTCTGGATGTTGTAGTCTGA 27659282
Query 39117 AAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGG 39176
|| | || | || || |||||||||| |||||||| |||||||||||||| | |||
Sbjct 27659283 GAGAATGCGGCCATCCTCCAGCTGTTTGCTGGCAAATATCAGACGCTGCTGGTCAGGGGG 27659342
Query 39177 CACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCAC 39236
| | ||| ||||| |||||| |||| || | | || || || | ||| ||
Sbjct 27659343 TATACCCTCCTTGTCTTGAATTTTCGCATTGACATTCTCAATGGTGTCACTGGGCTCGAC 27659402
Query 39237 GTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286
|| | ||||| | || ||||| || || || |||||||| |||||||
Sbjct 27659403 CTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATCT 27659452
>seq377
Length=146757320
Score = 89.7 bits (98), Expect = 4e-13
Identities = 109/145 (75%), Gaps = 3/145 (2%)
Strand=Plus/Minus
Query 39057 GCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGC 39116
||| |||| | ||| | ||||| || || ||| |||||| || || || || || |
Sbjct 124616689 GCCACCTCGCAGGCGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGA 124616630
Query 39117 AAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGG 39175
|| || || | || || |||||||||||||||| ||| |||||||||||||| |||||
Sbjct 124616629 GAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAGTATCAGACGCTGCTGGTCAGGTGG 124616570
Query 39176 GCACGCTCTCTTTGTCCATGATTTT 39200
| | || ||| |||||| ||| |||
Sbjct 124616569 G-ATGCCCTCCTTGTCC-TGAATTT 124616547
>seq646
Length=133456746
Score = 87.8 bits (96), Expect = 2e-12
Identities = 162/238 (68%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 39049 TTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTA 39108
||| | | ||| |||| | ||| | ||||| || || || |||||| || || ||
Sbjct 115608216 TTAATAATGCCACCTCGCAGGCGCAGCACCAGGTGCAGGATGGACTCTTTCTGGATGTTC 115608275
Query 39109 TAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGG 39168
|| || | || | | | || || |||||||||||| ||||||| |||| |||||||
Sbjct 115608276 TAGTCTGAGAGACTGTGGCCATCCTCCAGCTGTTTGCCCACAAATATCAGACACTGCTGG 115608335
Query 39169 TCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTC 39228
|| | | | || ||| ||||| |||||| ||||| || | | || || ||
Sbjct 115608336 TCAGGCAGGATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTG 115608395
Query 39229 GACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286
| | |||| || | ||||| | || ||||| || || || | |||||| |||||||
Sbjct 115608396 GGCCCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTGTTCATAAAGATCTGCATCT 115608453
>seq168
Length=201391403
Score = 82.4 bits (90), Expect = 7e-11
Identities = 152/219 (69%), Gaps = 3/219 (1%)
Strand=Plus/Minus
Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128
||| | ||||| || |||||| |||||| | || || || || | || ||| | |
Sbjct 28010475 GCGCAGCACCAGGTGCAGCGTGGACTCTTTCCGGATGTTGTAGTCTGAGAGAGTTTGGCC 28010416
Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTT 39187
|| || ||||||||||| |||| ||| ||| |||||||||| |||||| | | ||| |
Sbjct 28010415 ATCCTCCAGCTGTTTGCCAGCAAGTATCAGATGCTGCTGGTCAGGTGGG-ATAC-CTCCT 28010358
Query 39188 TGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247
||| ||||| ||||| || | | || || || | || || || | ||||
Sbjct 28010357 TGTGTTGAATTTTGGCTTTGACATTCTCAATGGTGTCACTTGGCTTGACCTCAAGAGTGA 28010298
Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286
| | || ||||| || || || |||||||| |||||||
Sbjct 28010297 TGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATCT 28010259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429332474373143
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |