Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq848 145 6e-30
seq168 109 4e-19
>seq848
Length=78004504
Score = 145 bits (160), Expect = 6e-30
Identities = 131/165 (79%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773
|| || |||| ||| || |||||||| ||||| || | ||||||||||||||| || |||
Sbjct 14422033 AGGCCCGTGATGTGTGCAATCATGTATGTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGC 14422092
Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833
|| ||||| |||||||| || || |||||||| |||||||| || ||||| | || |
Sbjct 14422093 ACACCGAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACC 14422152
Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGA 29878
|| || ||||| || | ||||||||| ||||| || ||||| |||
Sbjct 14422153 ACATAGAACTGGCAGAGGGCATGGCATGGAGGCAGCGCCATCAGA 14422197
Score = 102 bits (112), Expect = 7e-17
Identities = 110/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076
||||||||||||||||| || || || || |||| ||| || ||||| ||| |||
Sbjct 14428853 AAATGCCTCCACTGGAAGCCATAAACTGGGCCCAAGTCCCCTTCTTCTCTGGTGGAGAAT 14428912
Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136
||| ||||||||||||||| || || ||||| |||||||| || || |||||
Sbjct 14428913 CCCAGGCTGTCCAAAAAGTCTCGAGATCCATTGGCATCCCAGATTTTCACTCCCTTGGAA 14428972
Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCC 30162
|| |||||||| | |||||||| ||
Sbjct 14428973 GACAGCTCTTTAGCATTTGTGGATCC 14428998
>seq168
Length=201391403
Score = 109 bits (120), Expect = 4e-19
Identities = 183/260 (70%), Gaps = 10/260 (4%)
Strand=Plus/Plus
Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCT 114321
||||||||| || || || || || || |||||||| |||| || | || || |
Sbjct 95260052 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTATCCTT 95260111
Query 114322 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 114381
| ||||| |||||| || || ||||||||||| ||||| |||||||| ||||||| ||
Sbjct 95260112 TAAAGGTCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATAATCACCAGATT 95260171
Query 114382 CTGCTTA-CCTCTGTCGGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTG 114439
||| ||| ||||| | ||||| || | |||| | ||| | || | | || || ||
Sbjct 95260172 CTGTTTACCCTCT-ACTGAAGAAGTTGTGGTC-ATTCTCTGGAAATACCTGAATTCATTC 95260229
Query 114440 CAAAGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCTGGACAC 114499
| ||| || ||| ||||| || ||||| || ||||||||||||| | | ||
Sbjct 95260230 CTGAGT------GGCGGCCTGGGCAGGTCCCCGTTCTTGCCGATGCCCATGTTTTGGGAC 95260283
Query 114500 GCTGCCACGATACCGTTCAG 114519
| || ||||| | ||| ||
Sbjct 95260284 ACAGCGACGATGCAGTTTAG 95260303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405961675908946
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |