Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq931 306 3e-78
seq1 143 2e-29
seq860 114 1e-20
seq39 104 2e-17
seq377 89.7 4e-13
seq168 84.2 2e-11
seq235 82.4 7e-11
>seq931
Length=156331669
Score = 306 bits (338), Expect = 3e-78
Identities = 525/757 (69%), Gaps = 9/757 (1%)
Strand=Plus/Plus
Query 4379 TCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCT 4438
|| ||| || ||||| || || || || |||| || ||| || || ||||| | |
Sbjct 44830140 TCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCTT 44830199
Query 4439 CACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATC 4498
|||||| | || | || | || ||||||||||| || || | | ||||| ||
Sbjct 44830200 CACAGGCAAGGCCTCGGTGAGGAATTCTTGTTCTATCTGAACAGCATTGATAATTATTTC 44830259
Query 4499 TTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATC 4558
| | | ||| || | |||||||| | ||| | || | |||| || || ||||||||
Sbjct 44830260 TCTCACTTTCTCCTCCGATGGTTTGTGTACCAGGTGTTTGAACATCAAGCAAGCAAAATC 44830319
Query 4559 ACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAA 4618
||| || ||||| || ||||||||||| ||||| || |||||||| | || |||||
Sbjct 44830320 ACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCGG 44830379
Query 4619 ACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTAC 4678
|||| || || ||||| ||||| | ||||| || ||||||||||| |||||||||||
Sbjct 44830380 TCCTCGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCTAC 44830439
Query 4679 GGCGGCAAACGCTACTA-ATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTA 4737
|| || || ||||| | || ||| | ||| ||||||| |||||| |
Sbjct 44830440 TGCAGCGAAGGCTACAACATGTTCACCATAGGTAGCCT-CTTTGTCCCCAATCCAGCGCA 44830498
Query 4738 ATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATA---ATT 4794
| ||||| | || || ||||| || || || || || | || || || || | |||
Sbjct 44830499 AGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTCA-ATGGCATTGAAGAGAAATT 44830557
Query 4795 TACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAAT 4854
|||| || | | |||| || |||||||| || || || ||||||||||||||||
Sbjct 44830558 CCCTTTCTTTGA---GATCTTTGATGTAAGTGTCAATAAGGAGACTATACATTTCAGAAT 44830614
Query 4855 GTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTT 4914
|||| ||||| || ||||| || || || || || || | |||||||| | ||||||
Sbjct 44830615 GTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTA 44830674
Query 4915 CGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACG 4974
| | ||||| || || || ||||| |||||||| || ||||| |||||||| ||
Sbjct 44830675 TTTGGCTAAATCGCTCCACCAAATTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAA 44830734
Query 4975 CCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAAT 5034
||| |||||| |||||||| || || || ||||| || || |||||| | | |
Sbjct 44830735 CCAGAACATGGGATATAAAATATCTCTCCTCGGGCTTCAGGGGTTCCCAGTGCCGAATGT 44830794
Query 5035 CTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAG 5094
| || | | || || || || ||||| || || || ||||| || || |||||
Sbjct 44830795 CCTTGGACAGGTCCACCTCCTCGGTGGTCCAGAAGGAAGCCTCCGCCTTCTTATACATCT 44830854
Query 5095 ACCAAATATCAGGATACTGAATCGGAAGTATGACAAA 5131
||| |||||| | |||| || || | ||||||||
Sbjct 44830855 GCCAGATATCATGGTACTCGATGGGGAAGATGACAAA 44830891
Score = 156 bits (172), Expect = 4e-33
Identities = 385/574 (67%), Gaps = 25/574 (4%)
Strand=Plus/Minus
Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAAT 4607
|| ||||| | ||| || ||||| || || |||||||| ||||| || ||||| || |
Sbjct 144506196 CAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGG 144506137
Query 4608 CCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAAT 4667
|| ||||| | ||| || || ||||| ||||| ||||| || |||||||||||
Sbjct 144506136 CCAGGCATCAGTCCTTGTTTCTTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGAAG 144506077
Query 4668 ATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTT-TGTCTTT 4726
||| ||| | |||||| ||| | || | || || | ||| | |||||||
Sbjct 144506076 GTGCTTTCCGCCAGGGCAAAGGCTGC--AT-GCAACACGTTCTCCATGGGTAATGTCTTT 144506020
Query 4727 ------AATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATAT 4780
|||||| || |||| || || ||||| || || || || || | ||
Sbjct 144506019 GTTCCCAATCCAACACAAGACCCAACCTGCCTTCTTCTTGACACA-GGCATCGTTTCAAT 144505961
Query 4781 AGCGTTAAATA---ATTTACTTTTTTCAAATGGG-TCTTGAATATAAGTGTCTATTAGTA 4836
|| | || | ||| |||| || || |||| ||||| ||||| || || |
Sbjct 144505960 GGCACTGAAGAGAAATTCCCTTTCTT----TGTTATCTTTAATAT--GTGTCAATAAGGA 144505907
Query 4837 GGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAG 4896
| ||| |||||||||| ||| |||||||||||||| || || || || ||||| |
Sbjct 144505906 GATTATTTATTTCAGAATATATGTTTTCTATAGCAATTTGGAAGCCATAGAAGCAGGAGG 144505847
Query 4897 CTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGT 4956
|||||| | |||||||| | | |||| ||| || |||||||| | || ||| || |
Sbjct 144505846 TTTCTGTAATCTGAACTTCTTGAACAAATTGTTCCACGAAGTTTTCATCTATTATCCCAT 144505787
Query 4957 CACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTT 5016
||| ||||| || || |||| || ||| |||||||| || || |||||||| ||
Sbjct 144505786 CACATGCTGCGAAGAAAGCCAGAATATGGGATATAAAATATCTTTACTCAGGCTTCAGGG 144505727
Query 5017 TTTTCCAGTGGGGCAAA--TCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGC 5074
|| ||||| | |||| || || | | || || || | | |||| || || |
Sbjct 144505726 CTTCCCAGT--GCCAAATGTCCTTGGACAGGTCCACCTCCTGGGCCATCCAGAAAGAAAC 144505669
Query 5075 TTCCGCTTTTTTGTACATAGACCAAATATCAGGA 5108
|| |||| || ||||| |||||||||| ||
Sbjct 144505668 CTCTACTTTCTTTTACATTTTCCAAATATCATGA 144505635
>seq1
Length=228908639
Score = 143 bits (158), Expect = 2e-29
Identities = 141/182 (77%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 4812 TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCA 4871
|||| || |||||||| || || || |||||||||||||||||| | ||||| || |||
Sbjct 140322483 TCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTGTGTTTTCCATGGCA 140322542
Query 4872 ATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCT 4931
|| || || | || || || | |||||||| | |||||||| | | ||||| ||
Sbjct 140322543 ATTTGGAAGTCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTCC 140322602
Query 4932 ACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATA 4991
|| |||||||| |||||||| || ||||| |||||||| || |||| |||| | ||||||
Sbjct 140322603 ACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAGCCAGAACACGGGATATA 140322662
Query 4992 AA 4993
||
Sbjct 140322663 AA 140322664
>seq860
Length=57935654
Score = 114 bits (126), Expect = 1e-20
Identities = 212/304 (70%), Gaps = 9/304 (3%)
Strand=Plus/Plus
Query 31766 GCGCTAGTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCT 31825
|| || || ||||| || ||||| | | | ||||| || || || ||| || |||||
Sbjct 51797845 GCTCTTGTGAAAACGGACATTCAGACAACGCTTCCTTCTGGATGTTATGGA-GAGTAGCT 51797903
Query 31826 CCTAGATCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCA 31885
|| || ||||| ||||| | ||||||||| | || || || || ||||| | |||| |
Sbjct 51797904 CCAAGGTCTGGCTTGGCTGCAAAACACTTTGTTGATGTAGGAGCTGGTGTCACAGATGAA 51797963
Query 31886 GACTATAGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGG---AGAAAAATCATACAGT 31942
|| ||||||||||| ||||| |||| | ||||||||| | |||||| | | |||
Sbjct 51797964 GATTATAGAGGAAATGTTGGTGTTGTACTCTTTAATTTTTGCAAAGAAAAGT-TTGAAGT 51798022
Query 31943 ATAAAAAAGGGCGATAGGGTAGCTCAACTAATTTGCGAA--AAAATAGAAATGCCCCAAA 32000
|||||| || ||| | | || || || ||||| ||| | | ||| || |||
Sbjct 51798023 -CAAAAAAAGGTGATCGAATTGCACAGCTCATTTGTGAACGGATTTTTTAAT-CCAGAAA 51798080
Query 32001 TAGAAGTAGCTAATTATCTAGATTGCACGAAAAGAGGCGCTAAAGGCTTTGGATCTACCG 32060
|||||| || | | | | ||| ||| ||||| || | ||| ||||| |||||||
Sbjct 51798081 TAGAAGAAGTTCAAGCTTTGGATGACACCAAAAGGGGTTCAGGAGGTTTTGGCTCTACCG 51798140
Query 32061 GAAA 32064
||||
Sbjct 51798141 GAAA 51798144
>seq39
Length=107640188
Score = 104 bits (114), Expect = 2e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
|| ||||||||||| ||||| |||||||| || | |||||||| | |||| || ||
Sbjct 97368601 TCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCTTG 97368660
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
||||| ||||| | ||||| || || |||||||| |||||||| || || ||||| |||
Sbjct 97368661 AGCCAGAATATCGACGCAAAAGAACCGGAAAAGAAAATGCCTTCCACTGCAGCAAAGGCT 97368720
Query 4692 AC 4693
||
Sbjct 97368721 AC 97368722
Score = 91.5 bits (100), Expect = 1e-13
Identities = 91/118 (77%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 4809 GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATA 4868
|| |||| || |||||||| || || || |||||||||||||||||||| ||||| ||
Sbjct 97370968 GGATCTTTTATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATG 97371027
Query 4869 GCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATC 4926
||||| || || || || || || | |||||||| | |||||||| | | |||||
Sbjct 97371028 GCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATC 97371085
>seq377
Length=146757320
Score = 89.7 bits (98), Expect = 4e-13
Identities = 98/130 (75%), Gaps = 3/130 (2%)
Strand=Plus/Plus
Query 4921 AAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAA 4980
|||||||| || || ||||| ||||| || || ||||||||||||||||| || || |
Sbjct 103182368 AAAATCTT---ACCAAATTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCTAAGA 103182424
Query 4981 CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAG 5040
||||| || ||||||| || || | ||||| || |||||||| || | ||| || |
Sbjct 103182425 TGTGAGAGATGAAGTACTTCTCATCTGCTTTAAGCTTGTTCCAGTGAGGGAGATCCTTTG 103182484
Query 5041 TTAAATCAAC 5050
||| || ||
Sbjct 103182485 ATAAGTCGAC 103182494
Score = 86.0 bits (94), Expect = 5e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319
|| || || || ||||| || || |||||||| ||||| |||||||| ||||| ||||||
Sbjct 103151143 TGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTTCCTTCTAAAGAAATGTTTTCC 103151202
Query 4320 ATAAAATCAAACGGATT 4336
||||||||||| |||||
Sbjct 103151203 ATAAAATCAAAAGGATT 103151219
Score = 86.0 bits (94), Expect = 5e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319
|| || || || ||||| || || |||||||| ||||| |||||||| ||||| ||||||
Sbjct 103176272 TGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTTCCTTCTAAAGAAATGTTTTCC 103176213
Query 4320 ATAAAATCAAACGGATT 4336
||||||||||| |||||
Sbjct 103176212 ATAAAATCAAAAGGATT 103176196
>seq168
Length=201391403
Score = 84.2 bits (92), Expect = 2e-11
Identities = 113/156 (72%), Gaps = 6/156 (4%)
Strand=Plus/Minus
Query 34294 AAAGGAAACAGCAAAAAC---ATACAAATGGTTCAGTATATTTATAAAAACACATCTTCT 34350
|||| ||||| || ||| | ||||||||| || |||||||| ||| ||||| || |
Sbjct 175384057 AAAGAAAACACAAAGAACGACAAACAAATGGTCCAATATATTTACAAATACACAAGTTAT 175383998
Query 34351 TACGGAGATCCTCTAATGTTGATGAAAAGCGCTAGAAGTAACTGCTGGGATAAAACCGCT 34410
| | ||| || ||||||||||||||||||||| || || ||| |||| ||
Sbjct 175383997 CCTG---ACCCTATATTGTTGATGAAAAGCGCTAGAAATAGTTGTTGGTCTAAAGATGCA 175383941
Query 34411 GAGTACGGTCTTTACTCAGTATATCAAGGAGGAATA 34446
|| || || || || || | |||||||| ||||||
Sbjct 175383940 GAATATGGACTCTATTCCATCTATCAAGGGGGAATA 175383905
>seq235
Length=173266796
Score = 82.4 bits (90), Expect = 7e-11
Identities = 93/125 (74%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 31802 TCAGGGTGCTACGGACGAATAGCTCCTAGATCTGGATTGGCAGTTAAACACTTTATCGAC 31861
|| ||||| || ||| || || ||| | ||||| ||||| | ||||| ||||| ||
Sbjct 87622159 TCTGGGTGTTATGGAAGAGTACTTCCATGGTCTGGCTTGGCTGCAAAACATTTTATTGAT 87622100
Query 31862 GTGGGTGCGGGTGTTATAGATTCAGACTATAGAGGAAACGTTGGAATTGTGTTGTTTAAT 31921
|| || || ||||| |||||| | | ||||||||||| ||||| ||| ||||||||
Sbjct 87622099 GTAGGAGCTGGTGTCATAGATGAAAATTATAGAGGAAATGTTGGTGTTGCACTGTTTAAT 87622040
Query 31922 TTTGG 31926
| |||
Sbjct 87622039 TCTGG 87622035
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426837712801763
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |