Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq931 394 1e-104
seq1 127 3e-24
seq39 120 4e-22
seq638 105 1e-17
seq377 105 1e-17
seq860 84.2 3e-11
>seq931
Length=156331669
Score = 394 bits (436), Expect = 1e-104
Identities = 654/938 (70%), Gaps = 20/938 (2%)
Strand=Plus/Plus
Query 46283 TTTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTT 46339
|||| ||||| ||| ||| | |||| ||| |||| | | | ||| |||| |||
Sbjct 44829964 TTTAGAAGTCAGCATTTAAGGTAAAAGAATTCTCTTTTGGACTTAACACCACTCTCATCC 44830023
Query 46340 TTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 46399
| || || || ||||| | |||| || || ||||| ||| || ||| ||||| |
Sbjct 44830024 TCTGATACTCGCCTACTCTCCTCTCAAAGAAGTTAGT-----CTTTCAGTGAAATATTCT 44830078
Query 46400 CCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCA 46459
|| |||| ||||| || | || ||| || |||| || | ||| || |
Sbjct 44830079 CCGTAAAGTCAAATGGGCTCTCTACTCCGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 44830138
Query 46460 GTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCA---CAATTCATTCCTATGA 46516
|||| ||||| || || || || || || | ||||| | |||||||| || ||||
Sbjct 44830139 GTCTGTCTGCCACAAACTCAATGTA---TTGCTTCATTAGAGTGCAATTCATCCCAATGA 44830195
Query 46517 GTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATA-TT 46575
| || || || | ||||| || || || |||||||| || ||||||| |||| ||
Sbjct 44830196 GCTTCACAGGCAAGGCCTCGGTGAGGAATTCTTGTTCTATCTGAACAGCATT-GATAATT 44830254
Query 46576 ATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCA 46635
|| | | ||| | ||||| |||| || | || ||||| ||||| || || |||
Sbjct 44830255 ATTTCTCTCACTTTCTCCTCCGATGGTTTGTGTACCAGGTGTTTGAACATCAAGCAAGCA 44830314
Query 46636 AAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGC 46695
|||||||| || | || |||||||| ||||| | ||| || ||||| ||||| ||||||
Sbjct 44830315 AAATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGC 44830374
Query 46696 ATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCT 46755
|| |||| || || |||||||| ||||| | || ||||| ||||||||||| ||||||
Sbjct 44830375 ATCGGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCT 44830434
Query 46756 TCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCAC 46812
||||| || ||||| || |||| || || || | || || || | ||||||
Sbjct 44830435 TCTACTGCAGCGAAGGCTACAACATGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAG 44830494
Query 46813 CTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGA 46872
| |||||||| ||||| ||||| ||||||||||| | ||| || ||||| ||||||
Sbjct 44830495 CGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCG-TTCAATGGCATTGAAGAGA 44830553
Query 46873 AAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAA 46932
|| | |||| | |||||| | || || || || | |||||||||||||| |||
Sbjct 44830554 AATTCCCTTTCTTTGAGATCTTTGATGTAAGTGTCAATAAGGAGACTATACATTTCAGAA 44830613
Query 46933 TGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACC 46992
|| |||||||| || || || || || || || ||||| | ||||| |||||||| ||
Sbjct 44830614 TGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACT 44830673
Query 46993 TCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAAT 47052
| | |||||| || |||||| ||||| ||||| |||||||| || ||||| ||
Sbjct 44830674 ATTTGGCTAAATCGCTCCACCAAATTTTCATTTACTATGCCATCACTTGCTGCAAAGAAA 44830733
Query 47053 GCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATA 47112
||| ||||| ||||||||| | || |||| |||| | ||||| ||
Sbjct 44830734 ACCAGAACATGGGATATAAAATATCTCTCCTCGGGCTTCAGGGGTTCCCAGTGCCGAATG 44830793
Query 47113 TCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATA 47172
|| || || | || || || || | |||||||| || ||||| || || ||||||||
Sbjct 44830794 TCCTTGGACAGGTCCACCTCCTCGGTGGTCCAGAAGGAAGCCTCCGCCTTCTTATACATC 44830853
Query 47173 TTCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210
| ||| |||||| | || | ||| || || || |||||
Sbjct 44830854 TGCCAGATATCATGGTACTCGATGGGGAAGATGACAAA 44830891
Score = 197 bits (218), Expect = 2e-45
Identities = 386/566 (68%), Gaps = 12/566 (2%)
Strand=Plus/Minus
Query 46630 CATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGC 46689
|| ||||| | ||| || | || ||||| || ||||| | ||| || |||||||||||
Sbjct 144506196 CAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGG 144506137
Query 46690 CCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAAT 46749
|||||||| ||||| | || |||||||| ||||| || ||||| |||||||||||
Sbjct 144506136 CCAGGCATCAGTCCTTGTTTCTTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGAAG 144506077
Query 46750 ATGCCTTCTACAGCCGC-------GAATGCGACAAG-TCTCTCTCCGTAACTGGCATCAT 46801
||| ||| | || | |||| ||| | |||| | |||| || | | |
Sbjct 144506076 GTGCTTTCCGCCAGGGCAAAGGCTGCATGCAACACGTTCTCCATGGGTAA-TGTCTTTGT 144506018
Query 46802 TATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAG 46861
| |||||| | ||||| | ||||| ||||| |||| |||||| ||||| || |
Sbjct 144506017 TCCCAATCCAACACAAGACCCAACCTGCCTTCTTCTTGACAC-AGGCATCGTTTCAATGG 144505959
Query 46862 CATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTAT 46921
|| | |||||||| | |||| | |||||||| |||||| || || | ||| |||
Sbjct 144505958 CACTGAAGAGAAATTCCCTTTCTTTGTTATCTTTA--ATATGTGTCAATAAGGAGATTAT 144505901
Query 46922 ACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAG 46981
||||| |||| |||||||| ||||| || || || || || || || | ||| |
Sbjct 144505900 TTATTTCAGAATATATGTTTTCTATAGCAATTTGGAAGCCATAGAAGCAGGAGGTTTCTG 144505841
Query 46982 TAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAG 47041
||||||| || ||| | |||| |||| || || |||| | ||| ||||||| |
Sbjct 144505840 TAATCTGAACTTCTTGAACAAATTGTTCCACGAAGTTTTCATCTATTATCCCATCACATG 144505781
Query 47042 CAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCC 47101
| || || || |||| | ||| ||||||||| ||| || | |||| | ||
Sbjct 144505780 CTGCGAAGAAAGCCAGAATATGGGATATAAAATATCTTTACTCAGGCTTCAGGGCTTCCC 144505721
Query 47102 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTT 47161
||| || || || || | || || || | || ||||||| || ||||| |||
Sbjct 144505720 AGTGCCAAATGTCCTTGGACAGGTCCACCTCCTGGGCCATCCAGAAAGAAACCTCTACTT 144505661
Query 47162 TTTTATACATATTCCATATATCACGA 47187
| || ||||| ||||| |||||| ||
Sbjct 144505660 TCTTTTACATTTTCCAAATATCATGA 144505635
>seq1
Length=228908639
Score = 127 bits (140), Expect = 3e-24
Identities = 181/254 (71%), Gaps = 3/254 (1%)
Strand=Plus/Plus
Query 46834 TTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCT 46893
||||| |||||||| |||||| || | || |||||||| | |||| | ||||
Sbjct 140322429 TTCTTGACACAAGG---TGTTTCAATGGTGTTGAAGAGAAATTCCCTTTCTTTGGAATCT 140322485
Query 46894 TTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATC 46953
|| | || || || || | |||||||||||||| ||||| ||||||| || || ||
Sbjct 140322486 TTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTGTGTTTTCCATGGCAATT 140322545
Query 46954 TGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGAC 47013
|| || | || ||||| | ||||| |||||||| || ||| | |||||| || |
Sbjct 140322546 TGGAAGTCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTCCACC 140322605
Query 47014 AAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAA 47073
|| || ||||| ||||| |||||||| || ||||| || |||| ||| | ||||||
Sbjct 140322606 AAGTTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAGCCAGAACACGGGATATAAAA 140322665
Query 47074 TATTTTTCATCGGT 47087
| | || |||||
Sbjct 140322666 TCACTCTCCTCGGT 140322679
>seq39
Length=107640188
Score = 120 bits (132), Expect = 4e-22
Identities = 101/124 (81%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713
|||||||| ||||| | ||| |||||||||||||| || ||||| ||||| || || |||
Sbjct 97368601 TCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCTTG 97368660
Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773
||||| ||||| | ||| ||||| || |||||||| |||||||| || || || || ||
Sbjct 97368661 AGCCAGAATATCGACGCAAAAGAACCGGAAAAGAAAATGCCTTCCACTGCAGCAAAGGCT 97368720
Query 46774 ACAA 46777
||||
Sbjct 97368721 ACAA 97368724
Score = 86.0 bits (94), Expect = 9e-12
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 46890 ATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGC 46949
|||||| | || || || || | ||||||||||||||| ||||| |||||||| || ||
Sbjct 97370970 ATCTTTTATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGC 97371029
Query 46950 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTC 47009
|| || || || || ||||| | ||||| |||||||| || ||| | |||||| ||
Sbjct 97371030 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 97371089
>seq638
Length=135235416
Score = 105 bits (116), Expect = 1e-17
Identities = 103/133 (77%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781
||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | ||
Sbjct 3895936 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCGATGGAC 3895877
Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841
||||| || |||| || |||||||| ||||| || ||||| || || | | ||||||
Sbjct 3895876 TCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAACTG 3895817
Query 75842 TTTCTGAGACCAT 75854
||||| | |||||
Sbjct 3895816 TTTCTTATACCAT 3895804
Score = 96.9 bits (106), Expect = 5e-15
Identities = 121/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398
|| || | ||| |||||||| ||||| | || || || || || || || || || ||
Sbjct 3869304 CTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCGATCCTGGCTGCCAGGATA 3869245
Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458
||||||||||| || | ||||| |||| || ||| |||| || || |||||||||| |
Sbjct 3869244 GCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTAGT 3869185
Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504
|| | || || || || | || | ||||| || ||||||||||
Sbjct 3869184 TCCACTGTGGTGACCCCACTGTACAAGCCTTGGATTACTTTCATGG 3869139
Score = 89.7 bits (98), Expect = 7e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053
|| || ||||| || | || || || |||||||| ||||| | |||||||| |||||
Sbjct 3875121 GTACCAGCATTGAAGAGAGTGGGCGAAGCATGAGTAAACCACCTCTCAGAAAGAAGATTA 3875062
Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113
||||||||||| |||| || || || || || || || |||| || | |||||||
Sbjct 3875061 TATGTTTCAATTGCTGCATCAATGTCTTCTTTGTGGATCCCAACAGATACTCTCATCAAC 3875002
Query 77114 ATATGCTGAGGTCGTTC 77130
||||| || |||| |||
Sbjct 3875001 ATATGTTGCGGTCTTTC 3874985
Score = 86.0 bits (94), Expect = 9e-12
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579
|||||||| ||||||||||| ||||||| ||||||||| ||||| ||||||||||| |||
Sbjct 3885296 TCAAATTCCTCTCCCCAAACCTCATCCAGACCAGGACACTCATTTGGACACATCAAAGAC 3885237
Query 76580 CACTC 76584
|| ||
Sbjct 3885236 CAGTC 3885232
>seq377
Length=146757320
Score = 105 bits (116), Expect = 1e-17
Identities = 105/136 (77%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711
|||||||||| || || | ||| || ||||| ||||| || ||||| || || | ||| |
Sbjct 103162975 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCT 103163034
Query 46712 TGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATG 46771
| ||||| |||||||| || |||||||| || ||||| | ||||||||||| || || |
Sbjct 103163035 TTAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCAAAGG 103163094
Query 46772 CGACAAGTCTCTCTCC 46787
| || | ||| || ||
Sbjct 103163095 CCACCACTCTTTCCCC 103163110
Score = 84.2 bits (92), Expect = 3e-11
Identities = 69/84 (82%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 47127 TACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACG 47186
||| ||||| ||||||||||| || |||| ||| | ||||||||| ||||| |||||| |
Sbjct 103188593 TACCTCTTCTGCTGTCCAGAAGGAAGCCTGTGCCTGTTTATACATTTTCCAAATATCAGG 103188652
Query 47187 ATATTGGATCGGAAAAATAACAAA 47210
|| ||||| ||||| || |||||
Sbjct 103188653 GTACTGGATTGGAAAGATGACAAA 103188676
>seq860
Length=57935654
Score = 84.2 bits (92), Expect = 3e-11
Identities = 178/259 (69%), Gaps = 10/259 (4%)
Strand=Plus/Minus
Query 44363 TCCCGTTGATCCAAATCCT--TGAGCGTCTCTATTGGTACTATCTAGAGATTGTACTTCC 44420
||| || || ||||| ||| ||| | | || ||||| ||| | || ||| |||||
Sbjct 51798142 TCCGGTAGAGCCAAAACCTCCTGAAC--CCCTTTTGGTGTCATCCAAAGCTTGAACTTCT 51798085
Query 44421 TCTAGATCAGGAT-AATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCTGTATT 44479
|||| || |||| || | || |||| | | || || || || |||| ||||||| | ||
Sbjct 51798084 TCTATTTCTGGATTAAAAAATCCGTTCACAAATGAGCTGTGCAATTCGATCACCTTTTTT 51798025
Query 44480 T-ATTTTAAAGGTATCTTTTCCATTATTGATCAAAATTACTCCAATGTTCCCCCTATAAT 44538
| | || ||| | ||||| | | ||| | | | || |||| || || |||||||
Sbjct 51798024 TGACTTCAAACTTTTCTTTGCAAAAATTAAAGAGTACAACACCAACATTTCCTCTATAAT 51797965
Query 44539 CTTCATCTATTACTCCACCTCCCACATCAATA---CCTTTTAGAGAAAGACCCGATCTAG 44595
|||||||| | || ||| |||| ||||||| | |||| || | || || || |
Sbjct 51797964 CTTCATCTGTGACACCAGCTCCTACATCAACAAAGTGTTTTGCAGCCAAGCCAGACCTTG 51797905
Query 44596 GCGCTATTCTTCCATAACA 44614
| |||| || |||||||||
Sbjct 51797904 GAGCTACTC-TCCATAACA 51797887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712571596595520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |