Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homo_20sapiens_20[refseq_20GCF_5F000001405.37_202017-06-14] 578 sequences; 3,253,848,404 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq50 596 1e-165 seq14 517 8e-142 seq511 468 4e-127 seq547 464 5e-126 seq538 464 5e-126 seq544 461 5e-125 seq20 455 2e-123 seq11 435 2e-117 seq18 147 2e-30 >seq50 Length=80373285 Score = 596 bits (660), Expect = 1e-165 Identities = 480/580 (83%), Gaps = 0/580 (0%) Strand=Plus/Plus Query 3941 ACATCTTCACCTGTAAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGT 4000 ||| ||| | || |||| || || ||||||| |||||||||||||||||||||||||| Sbjct 26170695 ACAACTTAAACTAGAAAACACCTTCATATTAATCATTCTTCTCATATACTTCAAATTTGT 26170754 Query 4001 ACTTAATACTTTTCTCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTT 4060 ||||||| | |||||| || || |||| ||| ||||||| ||| |||||| || ||||| Sbjct 26170755 ACTTAATGCCTTTCTCCTCCTGGACATCAGAGAGAACACCTGGGTATTCTGGCAGAAGTT 26170814 Query 4061 TGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCC 4120 | |||||||| | ||||| |||||||||||| ||||||| |||||||||||||||||||| Sbjct 26170815 TATATTTCTCCAAATCAATTTCTGGAAAAAACGTGTCACTTTCAAAGTCTTGCATGATCC 26170874 Query 4121 TAGTCACAAACAGTTTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTAC 4180 | |||||||| |||||||||| || ||| | | |||| ||||| ||||| |||||||| | Sbjct 26170875 TTGTCACAAATAGTTTAAGATGGCCTGGGTGATTCATGGCTTCCTTATAAACAGAACTGC 26170934 Query 4181 CTCCAATTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTA 4240 | |||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 26170935 CACCAACTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGTTGTTCAGTAAGTTTTA 26170994 Query 4241 AAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCT 4300 | |||||||||| ||| | | | ||||||||||| |||||| | ||||| ||||| Sbjct 26170995 AGGCATCATCTAGACTTCTGGAAAGAAAATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTC 26171054 Query 4301 TGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACC 4360 |||||||||| | ||||||||| || |||||||| || |||||||||||||| ||||||| Sbjct 26171055 TGCTGAGAACTAAATTAATTCTACCCTTTAAAGGTCGATTCTTCTCAGGAATGGAGAACC 26171114 Query 4361 AAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCA 4420 | ||||| |||||||||||||| | |||||||||| || ||| ||||| || || |||| Sbjct 26171115 AGGTCTTCTTACCCATAATCACCAGATTCTGTTTACCTTCTACTGAAGAGGTTGTGGTCA 26171174 Query 4421 TTCTTTGGAAATGTTTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGC 4480 |||| ||||||| | | || |||||| | || |||||| |||| || || | |||| Sbjct 26171175 TTCTCTGGAAATATCTGAATTCATTCCTGAGCGGTGGCCAGGGCAGGTCCCCGTTCTTGC 26171234 Query 4481 CAATGCCCATGTTTTGAGCTACAGCAACAATGCAGTTTAG 4520 | ||||||||||| || | ||||| || ||||||||||| Sbjct 26171235 CGATGCCCATGTTCTGGGACACAGCGACGATGCAGTTTAG 26171274 >seq14 Length=198295559 Score = 517 bits (572), Expect = 8e-142 Identities = 454/566 (80%), Gaps = 0/566 (0%) Strand=Plus/Plus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || ||||||| || ||||||| ||||||||||||||||||| || |||| Sbjct 94060934 AAAACACCTTCATATTAATCATCCTTCTCACATACTTCAAATTTGTACTTGATGTGTTTC 94060993 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 | || || |||| ||| ||||||| ||| ||||| || |||||| |||||||| | Sbjct 94060994 CCCTCCTGGACATCAGAGAGAACACCTGGGTATTCAGGCAGAAGTTTATATTTCTCCAAG 94061053 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 |||| ||||| |||||| ||||||| ||||||||| ||||||||||| |||||||| ||| Sbjct 94061054 TCAATTTCTGAAAAAAACGTGTCACTTTCAAAGTCCTGCATGATCCTTGTCACAAATAGT 94061113 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194 ||||||| || | | | | |||| ||||| ||||| |||||||| || |||| |||||| Sbjct 94061114 TTAAGATGGCCTAGGTGATTCATGGCTTCCTTATAAACAGAACTGCCACCAACTATCCAA 94061173 Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254 | ||||||||||||||||||||||||||| |||| ||||||||||| |||||||| ||| Sbjct 94061174 ATCATGTCTACTTTATTTGCTAATTCTGGTCGTTCAGTAAGTTTTAAGGCATCATCCAAA 94061233 Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314 || | || | ||||||||||| |||||| | ||||| ||||| |||||||||| | | Sbjct 94061234 CTTCTGGCAAGAAAATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAA 94061293 Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374 |||||||| | |||||||| || |||||||||||||| |||||||| ||||| ||||| Sbjct 94061294 TTAATTCTATCCTTTAAAGGTCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCC 94061353 Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGT 4434 |||||||| | |||||||||| | ||| ||||| || || |||||||| ||||||| Sbjct 94061354 ATAATCACCAGATTCTGTTTACCCTCTACTGAAGAAGTTGTGGTCATTCTCTGGAAATAC 94061413 Query 4435 TTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTT 4494 | || |||||| | || |||| |||| || || | ||||| |||||||||||| Sbjct 94061414 CTGAATTCATTCCTGAGCGGCGGCCTGGGCAGGTCCCCGTTCTTGCCGATGCCCATGTTT 94061473 Query 4495 TGAGCTACAGCAACAATGCAGTTTAG 4520 || | ||||| || ||||||||||| Sbjct 94061474 TGGGACACAGCGACGATGCAGTTTAG 94061499 >seq511 Length=4795265 Score = 468 bits (518), Expect = 4e-127 Identities = 442/566 (78%), Gaps = 17/566 (3%) Strand=Plus/Plus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct 2846692 AAAACACCTTCATATTAATCATTCTTCTCATATACTTGAAATTTGTACTTAATAC----- 2846746 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || ||||| | |||||||||| || || ||| |||||||| | | Sbjct 2846747 -----------ATCCGAGAGAACGCCTGGATATTCTGGCAGAATTTTATATTTCTCCAAA 2846795 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 |||| |||||||||||| ||||||| ||||||||| ||||||||||| |||||||| ||| Sbjct 2846796 TCAATTTCTGGAAAAAACGTGTCACTTTCAAAGTCCTGCATGATCCTTGTCACAAATAGT 2846855 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194 ||||||| || ||| |||||| ||||| ||||| |||||||| || |||| |||||| Sbjct 2846856 TTAAGATGGCCTGGGCGACTCATGGCTTCCTTATAAACAGAACTGCCACCAACTATCCAA 2846915 Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254 | |||||||||| |||||||||||||||| |||| ||||||||||| ||||| | | Sbjct 2846916 ATCATGTCTACTCTATTTGCTAATTCTGGTTGTTAAGTAAGTTTTAAGATCTCATCCAGA 2846975 Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314 || | || | ||||||||||| |||||| | ||||| ||||| |||||||||| | | Sbjct 2846976 CTTCTGGCAAGAAAATGAGCTCGCTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAA 2847035 Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374 |||||||| | ||| |||| || |||||| ||||||| |||||||| ||||| ||| | Sbjct 2847036 TTAATTCTATCCTTTGAAGGTCGATTCTTCCCAGGAATGGAGAACCAGGTCTTCCTACAC 2847095 Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGT 4434 | |||||| | |||||||||| || ||| ||||| | || |||||||| ||||||| Sbjct 2847096 AAAATCACCAGATTCTGTTTACCTTCTACTGAAGAGATTGT-GTCATTCTCTGGAAATAC 2847154 Query 4435 TTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTT 4494 |||| |||||| | || ||||| |||| || || | ||||| ||||||||||| Sbjct 2847155 CTAAATTCATTCCTGAGCGGCGGCCAGGGCAGGTCCCCGTTCTTGCCGATGCCCATGTTC 2847214 Query 4495 TGAGCTACAGCAACAATGCAGTTTAG 4520 |||| ||||| || ||||||||||| Sbjct 2847215 TGAGACACAGCGACGATGCAGTTTAG 2847240 >seq547 Length=4929269 Score = 464 bits (514), Expect = 5e-126 Identities = 441/566 (78%), Gaps = 17/566 (3%) Strand=Plus/Plus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct 2668573 AAAACACCTTCATATTAATCATTCTTCTCATATACTTGAAATTTGTACTTAATAC----- 2668627 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || ||||| | |||||||||| || || ||| |||||||| | | Sbjct 2668628 -----------ATCCGAGAGAACGCCTGGATATTCTGGCAGAATTTTATATTTCTCCAAA 2668676 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 |||| |||||||||||| ||||||| ||||||||| ||||||||||| |||||||| ||| Sbjct 2668677 TCAATTTCTGGAAAAAACGTGTCACTTTCAAAGTCCTGCATGATCCTTGTCACAAATAGT 2668736 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194 ||||||| || ||| |||||| ||||| ||||| |||||||| || |||| |||||| Sbjct 2668737 TTAAGATGGCCTGGGCGACTCATGGCTTCCTTATAAACAGAACTGCCACCAACTATCCAA 2668796 Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254 | |||||||||| |||||||||||||||| |||| ||||||||||| ||||| | | Sbjct 2668797 ATCATGTCTACTCTATTTGCTAATTCTGGTTGTTAAGTAAGTTTTAAGATCTCATCCAGA 2668856 Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314 || | || | ||||||||||| |||||| | ||||| ||||| |||||||||| | | Sbjct 2668857 CTTCTGGCAAGAAAATGAGCTCGTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAA 2668916 Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374 |||||||| | ||| || | || |||||| ||||||| |||||||| ||||| ||| | Sbjct 2668917 TTAATTCTATCCTTTGAAAGTCGATTCTTCCCAGGAATGGAGAACCAGGTCTTCCTACAC 2668976 Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGT 4434 | |||||| | |||||||||| || ||| ||||| | || |||||||| ||||||| Sbjct 2668977 AAAATCACCAGATTCTGTTTACCTTCTACTGAAGAGATTGT-GTCATTCTCTGGAAATAC 2669035 Query 4435 TTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTT 4494 |||| |||||| | || ||||| |||| || || | ||||| ||||||||||| Sbjct 2669036 CTAAATTCATTCCTGAGCGGCGGCCAGGGCAGGTCCCCGTTCTTGCCGATGCCCATGTTC 2669095 Query 4495 TGAGCTACAGCAACAATGCAGTTTAG 4520 |||| ||||| || ||||||||||| Sbjct 2669096 TGAGACACAGCGACGATGCAGTTTAG 2669121 >seq538 Length=4677643 Score = 464 bits (514), Expect = 5e-126 Identities = 442/566 (78%), Gaps = 17/566 (3%) Strand=Plus/Plus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || ||||||| ||||||||||||||||| ||||||||||||||||| | Sbjct 2674946 AAAACACCTTCATATTAATCATTCTTCTCATATACTTGAAATTTGTACTTAATACATC-- 2675003 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || | ||||| | |||||||||| || || ||| |||||||| | | Sbjct 2675004 ----------CA----AGAGAACGCCTGGATATTCTGGCAGAATTTTATATTTCTCCAAA 2675049 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 |||| |||||||||||| ||||||| ||||||||| ||||||||||| |||||||| ||| Sbjct 2675050 TCAATTTCTGGAAAAAACGTGTCACTTTCAAAGTCCTGCATGATCCTTGTCACAAATAGT 2675109 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194 ||||||| || ||| |||||| ||||| ||||| |||||||| || |||| |||||| Sbjct 2675110 TTAAGATGGCCTGGGCGACTCATGGCTTCCTTATAAACAGAACTGCCACCAACTATCCAA 2675169 Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254 | |||||||||| |||||||||||||||| |||| ||||||||||| ||||| | | Sbjct 2675170 ATCATGTCTACTCTATTTGCTAATTCTGGTTGTTAAGTAAGTTTTAAGATCTCATCCAGA 2675229 Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314 || | || | ||||||||||| |||||| | ||||| ||||| |||||||||| | | Sbjct 2675230 CTTCTGGCAAGAAAATGAGCTCGTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAA 2675289 Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374 |||||||| | ||| |||| || |||||| ||||||| |||||||| ||||| ||| | Sbjct 2675290 TTAATTCTATCCTTTGAAGGTCGATTCTTCCCAGGAATGGAGAACCAGGTCTTCCTACAC 2675349 Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGT 4434 | |||||| | |||||||||| || ||| ||||| | || |||||||| ||||||| Sbjct 2675350 AAAATCACCAGATTCTGTTTACCTTCTACTGAAGAGATTGT-GTCATTCTCTGGAAATAC 2675408 Query 4435 TTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTT 4494 |||| |||||| | || ||||| |||| || || | ||||| ||||||||||| Sbjct 2675409 CTAAATTCATTCCTGAGCGGCGGCCAGGGCAGGTCCCCGTTCTTGCCGATGCCCATGTTC 2675468 Query 4495 TGAGCTACAGCAACAATGCAGTTTAG 4520 |||| ||||| || ||||||||||| Sbjct 2675469 TGAGACACAGCGACGATGCAGTTTAG 2675494 >seq544 Length=4606388 Score = 461 bits (510), Expect = 5e-125 Identities = 433/554 (78%), Gaps = 17/554 (3%) Strand=Plus/Plus Query 3967 TATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACA 4026 ||||||| ||||||||||||||||| ||||||||||||||||| | Sbjct 2622039 TATTAATCATTCTTCTCATATACTTGAAATTTGTACTTAATAC----------------A 2622082 Query 4027 TTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGA 4086 | || |||| | |||||||||| || || ||| |||||||| | ||||| ||||||| Sbjct 2622083 TCCGAGAGAATGCCTGGATATTCTGGCAGAATTTTATATTTCTCCAAATCAATTTCTGGA 2622142 Query 4087 AAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCAT 4146 ||||| ||||||| ||||||||| ||||||||||| |||||||| |||||||||| || | Sbjct 2622143 AAAAACGTGTCACTTTCAAAGTCCTGCATGATCCTTGTCACAAATAGTTTAAGATGGCCT 2622202 Query 4147 GGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACT 4206 || |||||| ||||| ||||| |||||||| || |||| |||||| | |||||||||| Sbjct 2622203 GGGCGACTCATGGCTTCCTTATAAACAGAACTGCCACCAACTATCCAAATCATGTCTACT 2622262 Query 4207 TTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAA 4266 |||||||||||||||| |||| ||||||||||| ||||| | ||| | || | | Sbjct 2622263 CTATTTGCTAATTCTGGTTGTTAAGTAAGTTTTAAGATCTCATCCAGACTTCTGGCAAGA 2622322 Query 4267 AAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCT 4326 |||||||||| |||||| | ||||| ||||| |||||||||| | ||||||||| | Sbjct 2622323 AAATGAGCTCGTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTATCC 2622382 Query 4327 TTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCATAATCACTAAA 4386 ||| |||| || |||||| ||||||| |||||||| ||||| ||| || |||||| | | Sbjct 2622383 TTTGAAGGTCGATTCTTCCCAGGAATGGAGAACCAGGTCTTCCTACACAAAATCACCAGA 2622442 Query 4387 TTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGTTTAAAATCATTC 4446 ||||||||| || ||| ||||| | || |||||||| ||||||| |||| |||||| Sbjct 2622443 TTCTGTTTACCTTCTACTGAAGAGATTGT-GTCATTCTCTGGAAATACCTAAATTCATTC 2622501 Query 4447 ATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTTGAGCTACAGCA 4506 | || ||||| |||| || || | ||||| ||||||||||| |||| ||||| Sbjct 2622502 CTGAGCGGCGGCCAGGGCAGGTCCCCGTTCTTGCCGATGCCCATGTTCTGAGACACAGCG 2622561 Query 4507 ACAATGCAGTTTAG 4520 || ||||||||||| Sbjct 2622562 ACGATGCAGTTTAG 2622575 >seq20 Length=170805979 Score = 455 bits (504), Expect = 2e-123 Identities = 439/566 (78%), Gaps = 17/566 (3%) Strand=Plus/Plus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct 31366338 AAAACACCTTCATATTAATCATTCTTCTCATATACTTGAAATTTGTACTTAATAC----- 31366392 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || ||||| | |||||||||| || || ||| |||||||| | | Sbjct 31366393 -----------ATCCGAGAGAACGCCTGGATATTCTGGCAGAATTTTATATTTCTCCAAA 31366441 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 |||| |||||||||||| ||||||| ||||||||| ||||||||| | |||||||| ||| Sbjct 31366442 TCAATTTCTGGAAAAAACGTGTCACTTTCAAAGTCCTGCATGATCTTTGTCACAAATAGT 31366501 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194 ||||||| || ||| |||||| ||||| ||||| |||||||| || |||| |||||| Sbjct 31366502 TTAAGATGGCCTGGGCGACTCATGGCTTCCTTATAAACAGAACTGCCACCAACTATCCAA 31366561 Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254 | |||||||||| |||||||||||||||| |||| ||||||||||| ||| | | | Sbjct 31366562 ATCATGTCTACTCTATTTGCTAATTCTGGTTGTTAAGTAAGTTTTAAGATCTCAACCAGA 31366621 Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314 || | || | ||||||||||| |||||| | ||||| ||||| |||||||||| | | Sbjct 31366622 CTTCTGGCAAGAAAATGAGCTCGTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAA 31366681 Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374 |||||||| | ||| |||| || |||||| ||||||| |||||||| ||||| ||| | Sbjct 31366682 TTAATTCTATCCTTTGAAGGTCGATTCTTCCCAGGAATGGAGAACCAGGTCTTCCTACAC 31366741 Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGT 4434 | |||||| | |||||||||| || ||| ||||| | || |||||||| ||||||| Sbjct 31366742 AAAATCACCAGATTCTGTTTACCTTCTACTGAAGAGATTGT-GTCATTCTCTGGAAATAC 31366800 Query 4435 TTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTT 4494 |||| |||||| | || || || |||| || || | ||||| ||||||||||| Sbjct 31366801 CTAAATTCATTCCTGAGCGGCGGTCAGGGCAGGTCCCCGTTCTTGCCGATGCCCATGTTC 31366860 Query 4495 TGAGCTACAGCAACAATGCAGTTTAG 4520 |||| ||||| || ||||||||||| Sbjct 31366861 TGAGACACAGCGACGATGCAGTTTAG 31366886 Score = 304 bits (336), Expect = 9e-78 Identities = 417/578 (72%), Gaps = 16/578 (3%) Strand=Plus/Plus Query 3963 TTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTG 4022 ||| ||||||| |||||| |||||||||||||||||||||||||| | |||||| || | Sbjct 62460934 TTTATATTAATCATTCTTTTCATATACTTCAAATTTGTACTTAATGCCTTTCTCCTCCTC 62460993 Query 4023 CACATTAGAAAGAACACTT---GGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAA 4079 ||||| ||| | ||||| | || |||||| | |||||| |||||||||| |||| Sbjct 62460994 CACATCAGAGACAACACCTTGTGGGTATTCTGGGAGAAGTTTATATTTCTCTAAATCACC 62461053 Query 4080 TTCTGG----AAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTT 4135 |||| | |||||| ||||||| || |||||| |||||||||| |||||||| |||| Sbjct 62461054 TTCTAGGGGAAAAAAACGTGTCACTTTGAAAGTCCTGCATGATCCATGTCACAAATAGTT 62461113 Query 4136 TAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGA 4195 ||| || | | || |||| | ||| ||||| |||||||| ||||| | | | | | Sbjct 62461114 TAAAATGGTCTCAAT---TCATGGATTCCTTATAAACAGAACTGCCTCCCACTGTAAAAA 62461170 Query 4196 CCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAAC 4255 || |||| |||||||||||||| | | || || || ||||||| |||||| | | || Sbjct 62461171 ACACGTCTTGTTTATTTGCTAATTTTAGTTGCTCAATACGTTTTAAGGCATCACCCAGAC 62461230 Query 4256 TCTTAG-CTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314 | |||| | | |||| ||| ||| || || | ||||| ||| | |||| ||| | | Sbjct 62461231 T-TTAGTCAAGAAAAGGAGGTCTTTGCGGTGGTTCCTTGGATTCTCTACTGACAACTAAA 62461289 Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374 |||||| | |||||||| | |||||||||| ||| |||||||| |||| || Sbjct 62461290 TTAATTATATACTTTAAAGGTTGATTCTTCTCAGTAATCGAGAACCAGTTCTTCCTAATT 62461349 Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGT 4434 | || |||||||| | |||| | | | ||||| | || |||||||||||||| Sbjct 62461350 AAAAATACTAAATTTTCTTTACCCTCTGCTGAAGAGGGTGTGGTCATTCTTTGGAA---- 62461405 Query 4435 TTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTT 4494 | || | ||| | || || || |||| || || | || |||||||| || Sbjct 62461406 TCGAATTTATTTTTGAGCTGAGGTCAGGGCAGGTCCCCATTCCTGATGATGCCCATCTTC 62461465 Query 4495 TGAGCTACAGCAACAATGCAGTTTAGTGCTTGAACCAT 4532 || | ||| |||||||||||||| | |||||||| Sbjct 62461466 TGGGAAACATTGACAATGCAGTTTAGCGGATGAACCAT 62461503 Score = 284 bits (314), Expect = 9e-72 Identities = 234/284 (82%), Gaps = 1/284 (0%) Strand=Plus/Plus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || ||||||| |||||||| |||||||||||||||||||||||| | |||| Sbjct 56276512 AAAACACCTTCATATTAATCATTCTTCTTATATACTTCAAATTTGTACTTAATGCCTTTC 56276571 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || || |||| ||| ||||| | || |||||| || |||||| |||||||| | | Sbjct 56276572 TCCTCCTGGACATCAGAGAGAACGCCAGGGTATTCTGGCAGAAGTTTATATTTCTCAAAA 56276631 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTC-AAAGTCTTGCATGATCCTAGTCACAAACAG 4133 |||| |||||||||| | ||||||| ||| |||||| ||||||||||| |||||||| || Sbjct 56276632 TCAATTTCTGGAAAACACGTGTCACTTTCAAAAGTCCTGCATGATCCTTGTCACAAATAG 56276691 Query 4134 TTTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCA 4193 |||||||| || ||| | | ||| ||||| ||||| |||||||| || ||| |||||| Sbjct 56276692 TTTAAGATGGCCTGGGTGATTCACGGCTTCCTTATAAACAGAACTGCCATCAAGTATCCA 56276751 Query 4194 GACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTT 4237 | ||| ||||||||||||||||||||||| ||||| || |||| Sbjct 56276752 AATCATCTCTACTTTATTTGCTAATTCTGGTTGTTCAGTGAGTT 56276795 Score = 206 bits (228), Expect = 2e-48 Identities = 191/242 (79%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 26931 AGCTTTTAGTCTACATTGTGAACAATGGGAGTAACGCATGTGCAGCCTACAGTCACTAGC 26990 |||| |||| | |||| ||| ||||| || || || || |||||||| || | ||| || Sbjct 52189297 AGCTCTTAGGCCACATGGTGGACAATCGGGGTGACACAGGTGCAGCCCACGGACACCAGT 52189238 Query 26991 ATCTTCTCTAGCCTAAATGAATTAGGGCAGGGTTGATGCCCTTTGCGCACCACTAGAATC 27050 |||||||| |||| || || || |||||| || || || | |||||| || || ||| Sbjct 52189237 ATCTTCTCCAGCCGGAAGGAGTTGGGGCAGTGTGGAGGCTCCCTGCGCAGGACCAGGATC 52189178 Query 27051 TCTTGTTGGATAGGGACTGAGTTCATGTGGTAGTCTACATTCCCATCAGCATTAACACAT 27110 ||||| ||||| ||||| ||||||||||||||||| || ||||||||||| || | || Sbjct 52189177 TCTTGCTGGATGGGGACAGAGTTCATGTGGTAGTCCACGTTCCCATCAGCGTTGATGCAG 52189118 Query 27111 CCTAAGTAGCGACACTTTGCTTCCCAAATCACAGAGGGATATCTATCTTGATCTTCATTG 27170 || |||| ||| |||||||| ||||| ||||||||||||||||| || | || |||||| Sbjct 52189117 CCCAAGTGGCGGCACTTTGCCTCCCAGATCACAGAGGGATATCTCTCAGGGTCCTCATTG 52189058 Query 27171 CG 27172 || Sbjct 52189057 CG 52189056 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/197 (71%), Gaps = 9/197 (5%) Strand=Plus/Minus Query 27174 TGGAGAGTCCAAGGAGACGTAGATCTATTGTAGTAGTCTGAAGCCCTTTTAGAACTAGTA 27233 |||||| ||||||| || || |||| |||||||| ||||| | |||||| | | | ||| Sbjct 52187805 TGGAGATTCCAAGGTGAGGTGGATCGGTTGTAGTAATCTGAGGACCTTTTGGGATTGGTA 52187746 Query 27234 TT------CCAGTTACGGATGCTCAAAGTAACCATCACAGACCGTGGAAAGCTATTGTTA 27287 || || |||| ||||| ||| | |||||||||| ||| || ||| | |||| Sbjct 52187745 TTGGTATTCCGGTTATGGATGTTCAGGTTGACCATCACAGTCCGGGGGAAGTTCTTGTCC 52187686 Query 27288 GCAGC---TAAGCATCTTGGGGTTTGTGCGCTTGTTATTTCTGACTTTACTATACAATCT 27344 ||| | ||||| ||| || ||| | |||| ||| ||| ||| ||||| || Sbjct 52187685 TCAGAATTTGGGCATCCTGGATTTCGTGGGATTGTGATTCCTGCCTTCACTATGGCCTCC 52187626 Query 27345 ATGCTCAGCAGCAGAAG 27361 | |||||||||||| || Sbjct 52187625 AGGCTCAGCAGCAGTAG 52187609 >seq11 Length=242193529 Score = 435 bits (482), Expect = 2e-117 Identities = 443/572 (77%), Gaps = 13/572 (2%) Strand=Plus/Minus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || ||||||| ||||||||||| ||||||||||||||||||||| | |||| Sbjct 82857402 AAAACACCTTCATATTAATCATTCTTCTCATGTACTTCAAATTTGTACTTAATGCCTTTC 82857343 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || || |||| | | | ||||| ||| |||||| || || ||| |||||||| | | Sbjct 82857342 TCCTCCTGGACATCAAAGAAAACACCTGGGTATTCTGGCAGAAATTTATATTTCTCCAAA 82857283 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 |||| |||||||||||| ||||||| ||||||||| || |||||||| || ||||| ||| Sbjct 82857282 TCAATTTCTGGAAAAAACGTGTCACTTTCAAAGTCCTGTATGATCCTTGTGACAAATAGT 82857223 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTAT-ACACAGAACTACCTCCAATTATCCA 4193 |||||| || || | | |||| | ||| |||| | | ||||||||| |||| |||||| Sbjct 82857222 TTAAGACTGCTTGAGTGATTCATGGATTCCTTATAAAATAGAACTACCACCAACTATCCA 82857163 Query 4194 GACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAA 4253 | || |||||||||||||||||||||||| | | |||||||||| |||||||| | Sbjct 82857162 AATCACGTCTACTTTATTTGCTAATTCTGGTTAT----TAAGTTTTAAGGCATCATCCAG 82857107 Query 4254 ACTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAAC 4313 ||| | || | ||| ||| ||| ||||| || | ||| | ||| | |||||||| | Sbjct 82857106 ACTTCTTGCAAGAAATTGATCTCCTTGTGG-AGGTTCTTGTGGTCCCTCCTGAGAACTAA 82857048 Query 4314 ATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACC 4373 ||||||||| |||||||| || |||||||||||||| |||||||| |||| |||| Sbjct 82857047 ATTAATTCTATTCTTTAAAGGTCGATTCTTCTCAGGAATGGAGAACCAGATCTTCCTACC 82856988 Query 4374 CATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATG 4433 ||||||||| |||||||||||| || ||| || || || || |||| ||| ||||||| Sbjct 82856987 CATAATCACCAAATTCTGTTTACCTTCTACTGAGGAGGTTGTGGTCACTCTCTGGAAATA 82856928 Query 4434 TTTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGT--TTGCCAATGCCCATG 4491 | || |||||| | || |||||| |||| || ||| || ||||| ||||||||| Sbjct 82856927 CCTGAATTCATTCCTGAGCGGTGGCCAGGGCAGGT--CCTCGTTCTTGCCGATGCCCATG 82856870 Query 4492 TTTT---GAGCTACAGCAACAATGCAGTTTAG 4520 || | | | |||| || | ||||||||| Sbjct 82856869 TTCTGGGGGGACACAGTGACGACGCAGTTTAG 82856838 >seq18 Length=181538259 Score = 147 bits (162), Expect = 2e-30 Identities = 108/126 (86%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 4165 TTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGC 4224 ||||| |||||||| || |||| |||||||||||||||||||||||||||||||||||| Sbjct 80637884 TTATAAACAGAACTGCCACCAACTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGT 80637943 Query 4225 TGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGA 4284 ||||| ||||||||||| |||||||||| ||| | | | ||||||||||| |||||| Sbjct 80637944 TGTTCAGTAAGTTTTAAGGCATCATCTAGACTTCTGGAAAGAAAATGAGCTCCTTGTGGA 80638003 Query 4285 AGCTCC 4290 | ||| Sbjct 80638004 GGTTCC 80638009 Score = 134 bits (148), Expect = 1e-26 Identities = 103/122 (84%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 4045 TATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCA 4104 || ||| || |||||| |||||||| | ||||| |||||||||||| ||||||| |||| Sbjct 80633874 TACTCTGGCAGAAGTTTATATTTCTCCAAATCAATTTCTGGAAAAAACGTGTCACTTTCA 80633933 Query 4105 AAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCATGGATAACTCATAGCTTCT 4164 ||||||||||||||||| |||||||| |||||||||| || ||| | | |||| ||||| Sbjct 80633934 AAGTCTTGCATGATCCTTGTCACAAATAGTTTAAGATGGCCTGGGTGATTCATGGCTTCC 80633993 Query 4165 TT 4166 || Sbjct 80633994 TT 80633995 Score = 129 bits (142), Expect = 4e-25 Identities = 94/109 (86%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349 ||| ||||| |||||||||| | ||||||||| || |||||||| || ||||||||||| Sbjct 80649388 CTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTTTAAAGGTCGATTCTTCTCAGG 80649447 Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCT 4398 ||| |||||||| ||||| |||||||||||||| | |||||||||| || Sbjct 80649448 AATGGAGAACCAGGTCTTCTTACCCATAATCACCAGATTCTGTTTACCT 80649496 Score = 107 bits (118), Expect = 1e-18 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 3941 ACATCTTCACCTGTAAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGT 4000 ||| ||| | || |||| || || ||||||| |||||||||||||||||||||||||| Sbjct 80629059 ACAACTTAAACTAGAAAACACCTTCATATTAATCATTCTTCTCATATACTTCAAATTTGT 80629118 Query 4001 ACTTAATACTTTTCTCTTCTTGCACATTAGAAAGAACACTTGGATAT 4047 ||||||| | |||||| || || |||| ||| ||||||| ||| ||| Sbjct 80629119 ACTTAATGCCTTTCTCCTCCTGGACATCAGAGAGAACACCTGGGTAT 80629165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361248655211078