Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homo_20sapiens_20[refseq_20GCF_5F000001405.37_202017-06-14] 578 sequences; 3,253,848,404 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq64 143 5e-29 >seq64 Length=156040895 Score = 143 bits (158), Expect = 5e-29 Identities = 301/442 (68%), Gaps = 14/442 (3%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||| |||||||||||||| ||||| ||||||||| |||| | || ||||| || |||| Sbjct 44309805 TTGTAGCCTTTGCTGCAGTAGAAGGCATCTTCTTTTCTGGTTCTTTTGCATCGATATTCT 44309746 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || ||||||| | || ||||||| ||||| | |||||||| | ||| || | Sbjct 44309745 GGCTCAAGAAACGAGGACCGATGCCTGGCCTCACGTTTTCCAATGAACTTATTAGCAGAG 44309686 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCC 102095 | || ||| | || | || ||||| ||| || |||| ||| | | || | | | Sbjct 44309685 AAGAGGGTTTACACTGTGATTTTGCTTGCTTGATGTTCAAACA---CCTGGTACACAAAC 44309629 Query 102096 CATC--AAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATT 102153 |||| | ||||||| | ||||| | | | || || | || ||||||||||| Sbjct 44309628 CATCGGAGGAGAAAG--TGAGAGAAATAATTATCAATGCTGTTCAGATAGAACAAGAATT 44309571 Query 102154 TCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTA 102213 ||||| | || ||||||| || | | || ||||| |||| | |||| || || Sbjct 44309570 CCTCACCGAGGCCTTGCCTGTGAAGCTCATTGGGATGAATTGCACTCTAATGAAGCAATA 44309511 Query 102214 CATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG-ACTAGAAAAGCACTATAATG 102272 |||||| ||||||||||| | ||| || | ||| |||| ||| || | | | | Sbjct 44309510 CATTGAGTTTGTGGCAGACAGACTTATGCTGGAACTGGGTTTTAGCAAGGTTTTCGGA-G 44309452 Query 102273 TTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTG 102332 | | ||| || || | ||| |||||||| || || ||||| ||||| |||| Sbjct 44309451 TAGAGAGCCCATTTGACTTTACGGAGAATATTTCACT-GA----AAGACTAACTTCTTTG 44309397 Query 102333 AAAAGAGAGTCGCCGAGTATCA 102354 | | |||||| | ||||||||| Sbjct 44309396 AGAGGAGAGTAGGCGAGTATCA 44309375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989576671511990