Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homo_20sapiens_20[refseq_20GCF_5F000001405.37_202017-06-14] 578 sequences; 3,253,848,404 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq52 89.7 4e-13 >seq52 Length=64444167 Score = 89.7 bits (98), Expect = 4e-13 Identities = 149/216 (69%), Gaps = 11/216 (5%) Strand=Plus/Minus Query 15148 TCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGC 15207 ||| || || | |||||| || || || ||||| |||||||| || ||| | Sbjct 37049458 TCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTC----AGA-------C 37049410 Query 15208 GTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTT 15267 ||||| | ||| |||||||| |||| | | ||| | || ||||||||||| || Sbjct 37049409 ATCTTCCAGTTGCTTGCCAGCAAATATTAGTCTTTGCCGATCAGGAGGAATTCCTTCCTT 37049350 Query 15268 GTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAAT 15327 || || ||| |||||||| ||||| | ||||| ||| || | | ||| || Sbjct 37049349 ATCCTGGATCTTGGTCTTTACATTTTCTGTCGTATCCGAGGGTTCAACCTTGAGGGTGAT 37049290 Query 15328 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 |||||| ||||| || ||||| || ||||| ||||| Sbjct 37049289 GGTTTTCCCTGTAAGGGTTTTCACGAAAATCTGCAT 37049254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362176648673898