Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homo_20sapiens_20[refseq_20GCF_5F000001405.37_202017-06-14] 578 sequences; 3,253,848,404 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq16 89.7 6e-13 >seq16 Length=190214555 Score = 89.7 bits (98), Expect = 6e-13 Identities = 160/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 154872 ATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGT 154931 || ||||||||||||||||| || |||| || |||||| ||||| || | | ||| Sbjct 56594740 ATCATGATTACATACCCATCCACCAATGGGGTGTTTGAAGAGAACATCAGTGACGTGTGT 56594799 Query 154932 AAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAG 154991 | || | ||| | |||| || |||| || || || || |||||| | || || ||| Sbjct 56594800 GACCTCATCCATCAACATGGAGGATAGGTCTACCTAGACGGGGCAAATATGAACGCTCAG 56594859 Query 154992 GTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAA 155051 || ||| | || | || | ||| | ||||| | || ||||| | || || Sbjct 56594860 GTGGGAATCTGTCGCCCTGGAGACTTTGGGTCTGATGTCTCGCACCTAAATCTTCACAAG 56594919 Query 155052 ACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTA 155105 || ||||| ||||| || |||| || ||||||||| | || || || || ||| Sbjct 56594920 ACCTTCTGCATTCCCCACAGAGGAGGTGGTCCTGGCATGGGGCCCATTGGCGTA 56594973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579208615187520