Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homo_20sapiens_20[refseq_20GCF_5F000001405.37_202017-06-14] 578 sequences; 3,253,848,404 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq16 105 8e-18 >seq16 Length=190214555 Score = 105 bits (116), Expect = 8e-18 Identities = 166/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 138182 TACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATG 138241 ||| ||||| || || | ||||||||| || |||| || ||||| ||||| ||||| || Sbjct 56594973 TACGCCAATGGGCCCCATGCCAGGACCACCTCCTCTGTGGGGAATGCAGAAGGTCTTGTG 56594914 Query 138242 TAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGA--CCTACCTGT 138299 | |||||| || | ||||| | ||| |||| | || | ||| || ||||| Sbjct 56594913 AAGATTTAGGTGCGAGACATCAGACCCAAAGTCTCCAGGGC--GACAGATTCCCACCTGA 56594856 Query 138300 GCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACAT 138359 || || | |||||| || || || || |||| || |||| | ||| | || | ||| Sbjct 56594855 GCGTTCATATTTGCCCCGTCTAGGTAGACCTATCCTCCATGTTGATGGATGAGGTCACAC 56594796 Query 138360 ATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAAT 138415 | | |||||||| |||||| || |||| || ||||| ||||||||||| || Sbjct 56594795 ACGTCACTGATGTTCTCTTCAAACACCCCATTGGTGGATGGGTATGTAATCATGAT 56594740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578994216736560