Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homo_20sapiens_20[refseq_20GCF_5F000001405.37_202017-06-14] 578 sequences; 3,253,848,404 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1 136 7e-27 seq44 123 5e-23 seq20 113 8e-20 seq18 107 3e-18 seq46 105 1e-17 seq52 100 5e-16 seq31 100 5e-16 seq21 96.9 6e-15 seq22 87.8 3e-12 seq11 86.0 1e-11 seq16 84.2 4e-11 >seq1 Length=248956422 Score = 136 bits (150), Expect = 7e-27 Identities = 174/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || |||||| | ||||| || || | ||| | ||||| ||| || |||||| Sbjct 192716419 TTTCTTAGCACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATT 192716360 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952 || || || |||| ||| | || ||||| || || |||||||| || | |||||| || Sbjct 192716359 GTAGTCAGACAAAGTACGTCCATCTTCCAACTGCTTGCCAGCAAAGATCAGTCTCTGCTG 192716300 Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012 ||||| || |||||||| ||||| || || || ||||||||| ||| ||||| || Sbjct 192716299 ATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTATCTATTGTATCCGA 192716240 Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||| || || || || ||||| || || | | ||||| | ||| ||||||||||| Sbjct 192716239 GAGTTCAACCTCGAGGGTGATGGTCTTCCCCATAAGGGTTTTCACGAAAATCTGCATTTT 192716180 >seq44 Length=90338345 Score = 123 bits (136), Expect = 5e-23 Identities = 172/240 (72%), Gaps = 1/240 (0%) Strand=Plus/Plus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || |||||| ||||| || || | ||| | ||||| ||| || |||||| Sbjct 61055679 TTTCTTAGCACCACCAG-AAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATT 61055737 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952 || || || |||| ||| | || |||| || || |||||||| || | |||||| || Sbjct 61055738 GTAGTCAGACAAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTG 61055797 Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012 ||||| || |||||||| ||| | || || || |||||||| ||| ||||| || Sbjct 61055798 ATCAGGAGGAATTCCTTCCTTACCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGA 61055857 Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | ||| || || || || ||||| || || || | ||||| | ||| ||||||||||| Sbjct 61055858 GGGTTCAACCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 61055917 >seq20 Length=170805979 Score = 113 bits (124), Expect = 8e-20 Identities = 169/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || |||||| | ||||| || || | ||| | ||||| ||| || |||| | Sbjct 113581737 TTTCTTATCACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATACT 113581678 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952 || || || |||| | | | || |||| ||| || |||||||| || | ||| || || Sbjct 113581677 GTAGTCAGACAAAGTACATCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGTCTTTGCTG 113581618 Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012 ||||| || |||||||| ||||| || || || |||||||| ||| ||||| | Sbjct 113581617 ATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCAA 113581558 Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | ||| | || || || ||||| || | || | ||||| | ||| ||||||||||| Sbjct 113581557 GGGTTCAGCCTCGAGGGTGATGGTCTTCTCCGTAAGGGTTTTCAAGAAAATCTGCATTTT 113581498 >seq18 Length=181538259 Score = 107 bits (118), Expect = 3e-18 Identities = 238/340 (70%), Gaps = 29/340 (9%) Strand=Plus/Plus Query 167230 ATATAGTAATAAGTTATATATATTCCT---GATGTATACTTTATATTAAAGTTATTTTGT 167286 ||||| | ||| ||||||||||| | || |||| | ||||||| | |||||| | Sbjct 79379158 ATATATTTATATATTATATATATTTTTATATATCTATAATATATATTATATATATTTT-T 79379216 Query 167287 TCataattaattaacatgatattatttgtatataatttatatgaattacgaatattatat 167346 ||| || ||| || |||||| ||||| || ||||| |||| ||||||||| Sbjct 79379217 ATATATCTA--TAATAT-ATATTA----TATATTATATATATCTATTATATATATTATAT 79379269 Query 167347 aattttaatgatctattatatatattataaatggccgaattttttatataataaatagtt 167406 ||| || ||||||||||||||||| || || | | | | | |||| ||||||| || Sbjct 79379270 -ATTATATATATCTATTATATATATTAAAATTGTCTGTAATATAAATAT-ATAAATATTT 79379327 Query 167407 ttattataacaaaatattggatat-tttgataaataattatttttaCGTATACATTTTAG 167465 || |||| | ||||| |||| || ||||||| |||| | || |||| |||||| Sbjct 79379328 ATA-TATATTTATATATTTTATATATTATATAAATATTTATATATATTTATATATTTTA- 79379385 Query 167466 TCCGTCAGTATCAATACATGTTAAAatatttat-tgctttatat-ttacatactttatta 167523 | ||| ||| || || | |||||||| | ||||||| ||| ||| ||||||| Sbjct 79379386 ---TATATTAT--ATAAATATTTATATATTTATATATTTTATATATTATATA-TTTATTA 79379439 Query 167524 -atattttcat----tattatattttatttgtataGAAAT 167558 |||||| || ||| |||| | ||| |||| |||| Sbjct 79379440 TATATTTATATAATATATAATATATATTTTATATATAAAT 79379479 Score = 95.1 bits (104), Expect = 2e-14 Identities = 133/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 ||| || || || || |||| | | |||| |||| ||| || |||||||| || | ||| Sbjct 138267577 AATGTTGTAGTCAGACAAAGCACATCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGTCT 138267636 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 | | ||||| || |||||||| |||||||| || || ||||||||| | | || Sbjct 138267637 TTACTCGTCAGAAGGAATTCCTTCCTTATCTTGGATGTTGGCTTTTACATT--TCCTTGT 138267694 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||| | | ||| || || ||| | |||| ||| | | || ||| | ||||| ||||| Sbjct 138267695 ATCCAAGGGTTCAACCTCAAGACTGATGGCTTTCTCCATAAAGGTTGTTATGAAAATCTG 138267754 Query 172067 CATTTT 172072 |||||| Sbjct 138267755 CATTTT 138267760 >seq46 Length=83257441 Score = 105 bits (116), Expect = 1e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||| | |||| || || ||||| | ||||| |||||| |||||| || | || Sbjct 10258989 ACCACCACGCAGTCTCAACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGCCAGA 10258930 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 |||| | | | || |||| ||| || |||||||| || ||| || || ||||| || Sbjct 10258929 CAAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGG 10258870 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 |||||||| ||||| || || | |||||||| ||| ||||| ||| ||| || Sbjct 10258869 AATTCCTTCCTTATCCTGGATCTCGGCCTTTACATTTTCTATCGTATCCAACGGTTCAAC 10258810 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | || || | || || || || | ||||| | ||| ||||||||||| Sbjct 10258809 CTTGAGGGTGGTTGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 10258759 Score = 84.2 bits (92), Expect = 4e-11 Identities = 168/232 (72%), Gaps = 33/232 (14%) Strand=Plus/Plus Query 161383 aataaatta-atattat-taccatatacattaataaaaaatattaattttaatagtttaa 161440 |||||| || ||||||| || | ||| || ||||||| |||| ||| || || | || Sbjct 13715185 AATAAAATATATATTATATATAAAATATAT-AATAAAATATAT--ATTATA-TA-TAAAA 13715239 Query 161441 tatatataat-----tagcatacataatataatct---tattat-taataaat--tttgt 161489 |||||||||| || ||| ||||||| | | || ||| |||||||| | | | Sbjct 13715240 TATATATAATATCTATAATATATGTAATATATTATATATAATATATAATAAATAATATAT 13715299 Query 161490 attagataaaaattataataatattgatatatataatacatatttagatttta-ataaaa 161548 |||| ||| || |||||||| || ||||| |||| | ||||||| || ||| |||||| Sbjct 13715300 ATTATATATAATATATAATAA-AT--ATATAAATAA-ATATATTTATATATTATATAAAA 13715355 Query 161549 tgaata-atatttatagattattaaCTAAAGACGAAGATTTATTATATAAAT 161599 |||| ||||||||| ||| ||| |||| |||||||||||||| Sbjct 13715356 ATAATATATATTTATATATT-TTATATAAA--------TTTATTATATAAAT 13715398 >seq52 Length=64444167 Score = 100 bits (110), Expect = 5e-16 Identities = 166/240 (69%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || |||||| | ||||| || || | ||| | ||||| ||| || ||| || Sbjct 17517079 TTTCTTAGCACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTT 17517020 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952 || || || |||| | | | || |||| ||| || | |||||| || | ||| | || Sbjct 17517019 GTAGTCAGACAAAGCACATCCATCCTCCAGTTGCTTGCTAGCAAAGATCAGTCTTTACTG 17516960 Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012 ||||| || |||| ||| ||||| || | || |||| ||| ||| |||||||| Sbjct 17516959 ATCAGGAGGAATTCTTTCCTTATCCTGGGTCTTGGCCTTTATATTTTCTATCGTATCTGA 17516900 Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | ||| || | || || ||||| || || || | ||||| | || ||||||||||| Sbjct 17516899 GGGTTCAACCTTGAGGGTGATGGTCTTCCCTGTGAGGGTTTTCACAAAAATCTGCATTTT 17516840 >seq31 Length=133275309 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||||||||| || | || | || | || | |||||| || || || || Sbjct 124912174 ATCCCACCTCTAAGACGGAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCA 124912233 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | ||| | || |||| ||||| |||||||| || || ||||| |||||||| Sbjct 124912234 GACAGGGTGCGTCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGA 124912293 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| || || || ||||| || || || || || Sbjct 124912294 GGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTCGGCTCC 124912353 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| ||||| ||||| |||||||| | || || | ||| |||||||| Sbjct 124912354 ACTTCGAGAGTGATGGTCTTACCAGTCAGGGTCTTCACGAAGATCTGCAT 124912403 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||||||||| || | || | || | || | |||||| || || || || Sbjct 124912402 ATCCCACCTCTAAGACGGAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCA 124912461 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | ||| | || |||| ||||| |||||||| || || ||||| |||||||| Sbjct 124912462 GACAGGGTGCGTCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGA 124912521 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| || || || ||||| || || || || || Sbjct 124912522 GGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTCGGCTCC 124912581 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| ||||| |||||||| | || || | ||| |||||||| Sbjct 124912582 ACCTCGAGAGTGATGGTCTTACCAGTCAGGGTCTTCACGAAGATCTGCAT 124912631 >seq21 Length=159345973 Score = 96.9 bits (106), Expect = 6e-15 Identities = 166/240 (69%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || |||||| | ||||| || || | ||| | |||| ||| || ||| || Sbjct 157192602 TTTCTTAGCACCACCACGAAGTCTCAACACAAGATGAAGAGTAAGCTCCTTTTGAATGTT 157192543 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952 || || || | | | | | || |||| ||| || |||||||| || | ||| || || Sbjct 157192542 GTAGTCAGACA--GTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTG 157192485 Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012 ||||| || |||||||| ||||| || || || |||||||| ||| |||| | Sbjct 157192484 ATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCATATCCAA 157192425 Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | ||| || | || || ||||| || || || | ||||| ||| | ||||||||||| Sbjct 157192424 GGGTTCAACCTTGAGGGTGATGGTCTTCCCCGTAAGGGTTTTTATGGAAATCTGCATTTT 157192365 >seq22 Length=145138636 Score = 87.8 bits (96), Expect = 3e-12 Identities = 260/380 (68%), Gaps = 42/380 (11%) Strand=Plus/Minus Query 167211 ATATTCTATAAAAGGAACTATATAGTAATAAGTTATATATATT-CCTGATGTATACTT-T 167268 ||||| |||| || |||||| | ||| ||||||||||| | || |||| || | Sbjct 35248210 ATATTTTATATAA-----TATATATTTATATATTATATATATTATATAATATATATTTAT 35248156 Query 167269 ATATTAAAGTTATTTTGT-TCataattaatta-acatgatattatttgtatataatttat 167326 |||||| | |||||| | | ||| || ||| | || ||||| ||| |||||||| ||| Sbjct 35248155 ATATTATATATATTTTATATAATATATATTTATATATTATATTTTTTATATATAATATAT 35248096 Query 167327 atgaattacgaatat------tatataat-tttaatgatctattatatatattataaatg 167379 || || |||| |||||||| | || | || ||||||||||||| || || Sbjct 35248095 ATTTATATATTATATTTTTTATATATAATATATATTTATATATTATATATATTTTATATA 35248036 Query 167380 gccgaattttttatataataaatagttttattataacaaaatattggatattttgataaa 167439 | || |||||||| || ||| | | |||| | | |||||| ||||| ||| | Sbjct 35248035 TAATATTTATTTATATATTATATA--TATTTTAT-ATATAATATT---TATTT--ATATA 35247984 Query 167440 taat-tat-ttttaCGTATACATTTTAGTCCGTCAGTATCAATACATGT----TAAAata 167493 | || ||| ||||| |||| |||| | | ||| ||| || | || |||| Sbjct 35247983 TTATATATATTTTATATATAATATTTATTTATATATTAT--ATATATTTTATATATAATA 35247926 Query 167494 tttattgctttatatt-tacatactttat---taatatt--ttcat-tattatattttat 167546 |||||| | |||||| || ||| ||||| ||||||| || || |||||||| | | Sbjct 35247925 TTTATT--TATATATTATATATATTTTATATATAATATTTATTTATATATTATATATATT 35247868 Query 167547 ttgtataGAA-ATGCATTTA 167565 || |||| || || ||||| Sbjct 35247867 TTATATATAATATATATTTA 35247848 Score = 86.0 bits (94), Expect = 1e-11 Identities = 180/254 (71%), Gaps = 32/254 (13%) Strand=Plus/Minus Query 167229 TATATAGTAATAAGTTATATATATT-----CCTGATGTATACTT-TATATTAAAGTTATT 167282 |||||| | ||| ||||||||||| | || |||| || ||||||| | |||| Sbjct 35247787 TATATATTTATATATTATATATATTTTATATATAATATATATTTATATATTATATATATT 35247728 Query 167283 TTGTTCataat---taatta-acatgatat-ta-tttgtatataatttatatgaattacg 167336 || | ||||| || ||| | || |||| || ||| |||||||| ||||| ||| Sbjct 35247727 TTATATATAATATATATTTATATATTATATATATTTTATATATAATATATAT---TTA-- 35247673 Query 167337 aatattatata-atttta---atgatctat-tatatatattataaatggccgaatttttt 167391 |||||||||| |||||| || || ||| | ||||||||||| || ||||| | Sbjct 35247672 TATATTATATATATTTTATATATAATATATATTTATATATTATATAT------ATTTTAT 35247619 Query 167392 atataataaatagttttattataacaaaatattggatattttgataaataattat-tttt 167450 |||||||| ||| || ||| || | || || ||||||| ||| ||| |||| | || Sbjct 35247618 ATATAATATATATTTATATATTATATATATTTTATATATTTT-ATACATATTTATATATT 35247560 Query 167451 aCGTATACATTTTA 167464 | |||| |||||| Sbjct 35247559 A--TATATATTTTA 35247548 Score = 84.2 bits (92), Expect = 4e-11 Identities = 237/343 (69%), Gaps = 47/343 (14%) Strand=Plus/Minus Query 167229 TATATAGTAATAAGTTATATATATT-----CCTGATGTATACTT-TATATTAAAGTTATT 167282 |||||| | ||| ||||||||||| | || |||| || ||||||| | |||| Sbjct 35247857 TATATATTTATATATTATATATATTTTATATATAATATATATTTATATATTATATATATT 35247798 Query 167283 TTGTTCataat---taatta-acatgatat-ta-tttgtatataatttatatgaattacg 167336 || | ||||| || ||| | || |||| || ||| |||||||| ||||| ||| Sbjct 35247797 TTATATATAATATATATTTATATATTATATATATTTTATATATAATATATAT---TTA-- 35247743 Query 167337 aatattatata-atttta---atgatctat-tatatatattataaatggccgaatttttt 167391 |||||||||| |||||| || || ||| | ||||||||||| || ||||| | Sbjct 35247742 TATATTATATATATTTTATATATAATATATATTTATATATTATATAT------ATTTTAT 35247689 Query 167392 atataataaatagttttattataacaaaatattggatattttgataaataattat-tttt 167450 |||||||| ||| || ||| || | ||||| ||| | | ||| ||| |||| | || Sbjct 35247688 ATATAATATATATTTATATATTA--TATATATTTTATA-TATAATATATATTTATATATT 35247632 Query 167451 aCGTATACATTTTAGTCCGTCAGTATCAATACATGTTAAAatatttattgctttatattt 167510 | |||| |||||| ||| |||| || || | ||| |||| | ||| ||| Sbjct 35247631 A--TATATATTTTA-------TATAT-AATATATATTTATATA-TTAT--ATATAT-TTT 35247586 Query 167511 acatactttattaatattttcattattatattttatttgtata 167553 | ||| ||||| |||||| | |||||||| | ||| |||| Sbjct 35247585 ATATATTTTATACATATTTATA-TATTATATATATTTTATATA 35247544 >seq11 Length=242193529 Score = 86.0 bits (94), Expect = 1e-11 Identities = 324/476 (68%), Gaps = 43/476 (9%) Strand=Plus/Plus Query 127007 tatata-ttatacttactatgat-ttatatagaa-atatgaatgatataatttacaatta 127063 |||||| ||||| ||| | || ||||||| || |||| || |||| || || ||| | Sbjct 76070565 TATATAATTATA-TTATTTGTATATTATATATAACATATACATTATATTATATATAAT-A 76070622 Query 127064 tgataataATATTGTTAAA-ACATAT-ATGGATATTTTATTATCTCAAATACAATTTTTA 127121 | || ||| ||| |||| | | || | |||| | ||||| | |||| ||| | || Sbjct 76070623 TAATTATA-TATAATTAATTATAAATTAATTATATATAATTATAT--AATATAATATATA 76070679 Query 127122 TCAACTATAAATATTaaaaaaaTATGTAATACATATTCGAATAGAATGGTACATATATTA 127181 |||| ||| || | || ||| ||||||||| | | | ||| | |||||||| Sbjct 76070680 A----TATACATAATATATAA-TATATAATACATAATATAC-ATAATATAATATATATTA 76070733 Query 127182 TATATAGGATCATCTAAAGCGTATCATTTCaatatattgaataatttatataaaaatt-t 127240 |||||| || || || | ||| || | |||||| || ||||| || || | ||| | Sbjct 76070734 TATATAATATAATATATATAATATAATAT-AATATAATGTATAATATAATTATATATTAT 76070792 Query 127241 aactaatatacaatggtat----ttttatgatattattGATCCGTGTATTAATGTAGAAA 127296 | ||||||| |||| ||| || ||| ||||||| || |||||| || | Sbjct 76070793 ATATAATATATAATGTTATATAATTATATTATATTAT--AT-----AATTAAT-TA-TAT 76070843 Query 127297 GAATTTCATATAATAttttttttAATAGAAAATTATTTACAGAGGATGATATTGATCAAT 127356 | | || ||||||||| || || ||| | |||| |||| | | || |||| || ||| Sbjct 76070844 GTAATTAATATAATATAATTATT-ATATATAATTTTTTATATAATATAATAT--AT-AAT 76070899 Query 127357 TTAAAAATA-AAAATCCTTTGatattaatatatgactatacagataat-tctaatataaa 127414 | | |||| || || || || || ||||| | |||| | ||| | | |||||||| Sbjct 76070900 TATATAATATAATATAATTATATTATATTATAT-AATATATATATATTATATAATATAAT 76070958 Query 127415 agaat--tattatatca--ctataatat-gcagaataatataatattttatttaat 127465 | ||| |||||||| | |||||||| | ||| ||||| ||| |||| |||| Sbjct 76070959 ATAATTATATTATATAATTATATAATATAATATAATTATATATTATATTATATAAT 76071014 >seq16 Length=190214555 Score = 84.2 bits (92), Expect = 4e-11 Identities = 283/426 (66%), Gaps = 56/426 (13%) Strand=Plus/Minus Query 249327 atatatattgattaatataataattatctatattaaattccattatataactcgcgtata 249386 ||| ||||| ||| ||||||||| ||| ||| ||||| |||||||| |||| Sbjct 109753427 ATAAATATTTATTTATATAATAAATATATATTATAAATAT--TTATATAATAAA--TATA 109753372 Query 249387 ttattataaataa--actataaaagttaaatttgaattat---tgtttg------aaata 249435 | |||||||||| | |||| || ||||| | ||||| | ||| ||||| Sbjct 109753371 T-ATTATAAATATTTATTATATAA--TAAATATATATTATAAATATTTATATAATAAATA 109753315 Query 249436 tatattatttcaaa-----attatattgtcaaatatatgaattaattattatttctttac 249490 |||||||| ||| ||||||| | |||||||| ||| |||| || | || Sbjct 109753314 TATATTAT---AAATATTTATTATATAAT-AAATATATATTATAAATATTTATTATATAA 109753259 Query 249491 taattttGTA--ACAAACCTTTCTGTTATATTATTAATTTTAAGTAAATCCATCAAATAA 249548 ||| | | || | ||| ||| | ||||||||| ||| | ||||| || |||| Sbjct 109753258 TAAATATATATTATAAATATTTAT-TTATATTATAAATATATTATAAATATATATTATAA 109753200 Query 249549 TTTCTCATTTCTTTA----------TATAAATATTTATTTTTATAATCTGAAAAATCTGT 249598 | | |||| | || ||||||||||||||| |||||| |||| | | Sbjct 109753199 ATATTTATTTATATAATAAATATATTATAAATATTTATTTATATAAT-----AAATATAT 109753145 Query 249599 ATTAATTATGATTTCTGAATCTGTT--ATACTTTTTATAAATTTATGTTCATCtaatagt 249656 ||| || | |||| | || | | ||| | |||||||| | |||| || ||||| Sbjct 109753144 ATT-ATAAATATTTATTTATATAATAAATATATATTATAAATATTTGTTTATATAATAAA 109753086 Query 249657 tttatataattataaa-atttattttctctatgaaaatatttaatatcatatttattaca 249715 | ||| |||||||| ||||||| | ||| |||||| ||||| |||| ||||| | Sbjct 109753085 TATAT---ATTATAAATATTTATT---TATATATAAATATATAATA-AATATATATTATA 109753033 Query 249716 attatt 249721 | |||| Sbjct 109753032 AATATT 109753027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905129460392400