Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homo_20sapiens_20[refseq_20GCF_5F000001405.37_202017-06-14] 578 sequences; 3,253,848,404 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq64 269 2e-67 seq1 141 7e-29 seq11 113 4e-20 seq547 104 2e-17 seq544 104 2e-17 seq541 104 2e-17 seq538 104 2e-17 seq532 104 2e-17 seq20 104 2e-17 seq511 98.7 8e-16 seq46 93.3 3e-14 seq50 89.7 4e-13 seq22 89.7 4e-13 >seq64 Length=156040895 Score = 269 bits (298), Expect = 2e-67 Identities = 618/918 (67%), Gaps = 28/918 (3%) Strand=Plus/Minus Query 43677 TGCTTACAGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGC 43736 |||| | || ||| || | | |||||| | || || || | || ||||| || |||| Sbjct 44310263 TGCTGAGAGGAAACCCTTGCCGCTTTGTCATCTTCCCCATCGAGTACCATGATATCTGGC 44310204 Query 43737 AAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAG 43796 | ||||| | || || |||| || || ||||| | || || || || || | || | Sbjct 44310203 AGATGTATGAGAAGGCGGAGGCTTCCTTCTGGACCACCGAGGAGGTGGACCTGTCCAAGG 44310144 Query 43797 ACTTA--GCACATTGGATTGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTT 43854 || | |||| | ||| | | | || || | || | | |||||||||| ||| | Sbjct 44310143 ACATTCGGCAC-TGGGAATCCCTGAAGCCCG-AGGAGAGATATTTTATATCCCATGTTCT 44310086 Query 43855 GGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCA 43914 || || ||||| || || || || ||| | |||||||||||||| || ||| || Sbjct 44310085 GGTTTTCTTTGCAGCAAGTGATGGCATAATAAATGAAAATTTGGTGGAGCGATTTAGCCA 44310026 Query 43915 AGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973 | |||||| ||||| |||||| || ||||| ||||| || ||||||||||| ||||| | Sbjct 44310025 AATAGTTCAGATTAC-AGAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAACA 44309967 Query 43974 TTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC 44033 | ||||| |||||||| ||||| || || || || |||||||||||| | || | | Sbjct 44309966 TACATTCTGAAATGTATAGTCTCCTTATTGACACTTACATCAAAGATCCCAAAGAAAGGG 44309907 Query 44034 ATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCC 44093 | | || ||||| || | ||| | ||| | || | || ||||| |||||| Sbjct 44309906 AATTTCTCTTCAATGCCATTG-AACGATGCCTTGTGTCAAGAAGAAGGCAGATTGGGCCT 44309848 Query 44094 TTAAATGGAT---AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTG 44150 | ||||| | | | | | | | ||| ||||| |||| || ||||| | | Sbjct 44309847 TGCGCTGGATTGGGGACAAAGAGGCTACCTATGGTGAACGTGTTGTAGCCTTTGCTGCAG 44309788 Query 44151 TGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTT 44210 | |||||||| |||||||| || || ||||| | ||||| ||| | ||||||||||| Sbjct 44309787 TAGAAGGCATCTTCTTTTCTGGTTCTTTTGCATCGATATTCTGGCTCAAGAAACGAGGAC 44309728 Query 44211 TGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCG 44270 ||||||||| | |||||||| ||||| | || || | || || || ||||| || | Sbjct 44309727 CGATGCCTGGCCTCACGTTTTCCAATGAACTTATTAGCAGAGAAGAGGGTTTACACTGTG 44309668 Query 44271 ATTTTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAATTA 44330 |||||||||||||| | | | | || | | || || || || ||| | | | Sbjct 44309667 ATTTTGCTTGCTTGATGTTCAAACACCTGGTACAC---AAACCATCGGAGGAGAAAGTGA 44309611 Query 44331 CAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTG 44390 ||| || || | | || || |||||||||||||||| | || || || |||| Sbjct 44309610 GAGAAATAATTATCAATGCTGTTCAGATAGAACAAGAATTCCTCACCGAGGCCTTGCCTG 44309551 Query 44391 TAAATTTAATAGGAATGAA-TGAACTTTTGATGAACCAATATATTGAATACATTGCAGAT 44449 | || | || || ||||| || || | | ||||| ||||| ||||| | | ||||| Sbjct 44309550 TGAAGCTCATTGGGATGAATTGCAC-TCTAATGAAGCAATACATTGAGTTTGTGGCAGAC 44309492 Query 44450 CGTTTACTTTTGGAACTGGGTTGCGATAAACACTATATT----GTACAAAACCCGTTTGA 44505 | | | |||||||||||| | | || | || ||| | | ||| ||||| Sbjct 44309491 AGACTTATGCTGGAACTGGGTT----TTAGCAAGGTTTTCGGAGTAGAGAGCCCATTTGA 44309436 Query 44506 TTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGA 44565 |||| ||| |||||||| || ||| || ||||| ||||| | | || || || Sbjct 44309435 CTTTACGGAGAATATTTCACTGAAAG-----ACTAACTTCTTTGAGAGGAGAGTAGGCGA 44309381 Query 44566 ATATCAGCGAATGGGCGT 44583 |||||| | ||||| || Sbjct 44309380 GTATCAGAGGATGGGAGT 44309363 Score = 158 bits (174), Expect = 1e-33 Identities = 383/572 (67%), Gaps = 16/572 (3%) Strand=Plus/Plus Query 43723 TCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGT 43782 |||||| || ||| ||||||| || |||| | ||| || || |||| || | || || Sbjct 144309131 TCATGATATTTGGAAAATGTAAAAGAAAGTAGAGGTTTCTTTCTGGATGGCCCAGGAGGT 144309190 Query 43783 TGATTTGACTAAAGAC--TTAGCACATTGGATTGCATTAAAACCACAAGAAAAACATTTT 43840 || || | || ||| || |||| ||| || | || || | ||| | ||||| Sbjct 144309191 GGACCTGTCCAAGGACATTTGGCAC--TGGGAAGCCCTGAAGCCTGAGTAAAGATATTTT 144309248 Query 43841 ATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTT 43900 ||||| || |||| || ||||| || | || |||||| | ||||||| ||||| Sbjct 144309249 ATATCCCATATTCTGGCTTTCTTTGCAGCATGTGATGGGATAATAGATGAAAACTTGGTG 144309308 Query 43901 AGTCGGTTTGCGCAAGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAAT 43959 | |||| ||||||||||| |||| ||||| | || || ||||| || ||||| Sbjct 144309309 GAACAATTTGTTCAAGAAGTTCAGATTA-CAGAAACCTTCTGCTTCTATGGCTTCCAAAT 144309367 Query 43960 TGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGA 44019 ||| |||||||| || ||||| ||||| | | ||| || || || || | || ||||| Sbjct 144309368 TGCTATAGAAAACATACATTCTGAAATAAATAATCTCCTTATTGACAC--ATATTAAAGA 144309425 Query 44020 TGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAA 44079 | | || | | | | || | ||| || ||||| | |||| | | || | || Sbjct 144309426 TAACAAAGAAAGGGAATTTCTCTTCAGTGCCATTGAAACGATGCCTGTG-TCAAGAAGAA 144309484 Query 44080 AGCAGACTGGGCCCTTAAATGGAT---AAATTCAAATGATTCTTTTGGAGAACG----AC 44132 |||| |||| | | ||||| || | | | | | ||||||||| | Sbjct 144309485 GGCAGGTTGGGTCTTGTGTTGGATTGGGAACAAAGACGTTACCCATGGAGAACGTGTTGC 144309544 Query 44133 TTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTT 44192 || || ||||| | |||||| ||| |||||||| || || ||||| ||||| | Sbjct 144309545 ATGCAGCCTTTGCCCTGGTGGAAAGCACCTTCTTTTCTGGTTCTTTTGCATTGATATTCT 144309604 Query 44193 GGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTG 44252 || | ||||||| ||| |||||||||| | || ||||| ||||| | || || ||| Sbjct 144309605 GGCTCAAGAAACAAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATTAGCAGTG 144309664 Query 44253 ATGAAGGCTTACATTGCGATTTTGCTTGCTTG 44284 |||| || ||||| || | ||||||||| || Sbjct 144309665 ATGAGGGTTTACACTGTTACTTTGCTTGCCTG 144309696 >seq1 Length=248956422 Score = 141 bits (156), Expect = 7e-29 Identities = 145/187 (78%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 43836 ATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATT 43895 |||||||||| ||| |||| || ||||| || || || || ||||| |||||||| | Sbjct 161379034 ATTTTATATCCCGTGTTCTGGCTTTCTTTGCAGCAAGTGATGGCATAGTAAATGAAAACT 161378975 Query 43896 TGGTTAGTCGGTTTGCGCAAGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTT 43954 |||| || ||| ||||||||||| ||||| |||||| || ||||| |||| || Sbjct 161378974 TGGTGGAGCGATTTAGCCAAGAAGTTCAGATTAC-AGAAGCCCGCTGTTTCTATGACTTC 161378916 Query 43955 CAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATC 44014 ||||||||||| ||||| | ||||| |||||||| ||||| || || || || ||||| Sbjct 161378915 CAAATTGCCATGGAAAACACACATTCTGAAATGTATAGTCTCCTTATTGACACTTACATA 161378856 Query 44015 AAAGATG 44021 ||||||| Sbjct 161378855 AAAGATG 161378849 >seq11 Length=242193529 Score = 113 bits (124), Expect = 4e-20 Identities = 92/109 (84%), Gaps = 2/109 (2%) Strand=Plus/Plus Query 43913 CAAGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAA 43971 ||||||||||| |||| ||||||| || ||||| ||||| || ||||||||||| ||||| Sbjct 10124732 CAAGAAGTTCAGATTA-CAGAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAA 10124790 Query 43972 TATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020 || ||||| |||||||| |||||||| || || || ||||| |||||| Sbjct 10124791 CATACATTCTGAAATGTATAGTCTTCTTATTGACACTTACATAAAAGAT 10124839 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182 || ||||| |||| || ||||| | |||||||||||||||||||| || || |||||| Sbjct 10127086 GGTGAACGTGTTGTAGCCTTTGCTGCAGTGGAAGGCATTTTCTTTTCCGGTTCTTTTGCG 10127145 Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242 | ||||| ||| | ||||||||||| |||||||||| | || ||||| ||||| | Sbjct 10127146 TCGATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCTAATGAACTT 10127205 Query 44243 ATAAGTCGTGATGA 44256 || || | ||||| Sbjct 10127206 ATTAGCAGAGATGA 10127219 >seq547 Length=4929269 Score = 104 bits (114), Expect = 2e-17 Identities = 253/380 (67%), Gaps = 9/380 (2%) Strand=Plus/Minus Query 47216 GTGTTGCAATTTTTAGGACTTTATGAAAAATCAGGGAAAATATTATTTCTCGGGTTAGAC 47275 ||| | || || ||||||| || | |||| || ||| | ||||| |||| || ||| Sbjct 386489 GTGCTCCAGTTCCTAGGACTCTACAAGAAATTTGGAAAACTTGTATTTTTCGGTTTGGAC 386430 Query 47276 AATGCAGGAAAAACGGCATTACTCCACATGCTCAAA---TACA-ATTGCATGAAAGAGCA 47331 || ||||| ||||| | | || |||||||||||| ||| |||| | || || Sbjct 386429 AACGCAGGCAAAACCACTCTTCTTCACATGCTCAAAGATGACAGATTGGGTCAA----CA 386374 Query 47332 TAACCCTACATTACATCCGACCTCTGAACAACTAACAATTGCTGGCATAACATTTAGCAC 47391 | || ||| |||||||||| || ||| | ||| ||||||||| || || |||| || Sbjct 386373 TGTTCCAACACTACATCCGACATCAGAAAAGCTATTAATTGCTGGAATGACTTTTACAAC 386314 Query 47392 ATTTGATTTAGGAGGACACATTCAAGCGCGTAGAATGTGGCAAAATTATTTTCATGTCGT 47451 ||||| | || ||||||| ||||| || | || |||||||| | || | | Sbjct 386313 TCTTGATCTTGGTGGACACAAGCAAGCATGTCAGGTTTGAAAAAATTATCTCCAAGCAAT 386254 Query 47452 TGATGCTATAGTTTATATTGTAGACTGTGCAGATTTGACTAGACTGACAGAGGCAAAAAT 47511 | ||| || |||| | | || || | ||||||| || | || | || | ||| | Sbjct 386253 TAATGAGATTGTTTTTCTGGTGGATTCTGCAGATCATTCTGGCCTCATGGAATCTAAAGT 386194 Query 47512 CGAATTCGATGCGTTGTTAAACGATGAACTGTTACACGATGTTCCTATTTTAGTGTTGGG 47571 || | |||| || | | |||||| | || | |||| || || | | ||||| Sbjct 386193 TGAGCTTAATGCTTTAATGACTGATGAAATAATATCCAATGTGCCAATCCTTATATTGGG 386134 Query 47572 CAATAAAATCGACA-AACAA 47590 || ||||| |||| ||||| Sbjct 386133 TAACAAAATAGACAGAACAA 386114 >seq544 Length=4606388 Score = 104 bits (114), Expect = 2e-17 Identities = 253/380 (67%), Gaps = 9/380 (2%) Strand=Plus/Minus Query 47216 GTGTTGCAATTTTTAGGACTTTATGAAAAATCAGGGAAAATATTATTTCTCGGGTTAGAC 47275 ||| | || || ||||||| || | |||| || ||| | ||||| |||| || ||| Sbjct 342706 GTGCTCCAGTTCCTAGGACTCTACAAGAAATTTGGAAAACTTGTATTTTTCGGTTTGGAC 342647 Query 47276 AATGCAGGAAAAACGGCATTACTCCACATGCTCAAA---TACA-ATTGCATGAAAGAGCA 47331 || ||||| ||||| | | || |||||||||||| ||| |||| | || || Sbjct 342646 AACGCAGGCAAAACCACTCTTCTTCACATGCTCAAAGATGACAGATTGGGTCAA----CA 342591 Query 47332 TAACCCTACATTACATCCGACCTCTGAACAACTAACAATTGCTGGCATAACATTTAGCAC 47391 | || ||| |||||||||| || ||| | ||| ||||||||| || || |||| || Sbjct 342590 TGTTCCAACACTACATCCGACATCAGAAAAGCTATTAATTGCTGGAATGACTTTTACAAC 342531 Query 47392 ATTTGATTTAGGAGGACACATTCAAGCGCGTAGAATGTGGCAAAATTATTTTCATGTCGT 47451 ||||| | || ||||||| ||||| || | || |||||||| | || | | Sbjct 342530 TCTTGATCTTGGTGGACACAAGCAAGCATGTCAGGTTTGAAAAAATTATCTCCAAGCAAT 342471 Query 47452 TGATGCTATAGTTTATATTGTAGACTGTGCAGATTTGACTAGACTGACAGAGGCAAAAAT 47511 | ||| || |||| | | || || | ||||||| || | || | || | ||| | Sbjct 342470 TAATGAGATTGTTTTTCTGGTGGATTCTGCAGATCATTCTGGCCTCATGGAATCTAAAGT 342411 Query 47512 CGAATTCGATGCGTTGTTAAACGATGAACTGTTACACGATGTTCCTATTTTAGTGTTGGG 47571 || | |||| || | | |||||| | || | |||| || || | | ||||| Sbjct 342410 TGAGCTTAATGCTTTAATGACTGATGAAATAATATCCAATGTGCCAATCCTTATATTGGG 342351 Query 47572 CAATAAAATCGACA-AACAA 47590 || ||||| |||| ||||| Sbjct 342350 TAACAAAATAGACAGAACAA 342331 >seq541 Length=4827813 Score = 104 bits (114), Expect = 2e-17 Identities = 253/380 (67%), Gaps = 9/380 (2%) Strand=Plus/Minus Query 47216 GTGTTGCAATTTTTAGGACTTTATGAAAAATCAGGGAAAATATTATTTCTCGGGTTAGAC 47275 ||| | || || ||||||| || | |||| || ||| | ||||| |||| || ||| Sbjct 342868 GTGCTCCAGTTCCTAGGACTCTACAAGAAATTTGGAAAACTTGTATTTTTCGGTTTGGAC 342809 Query 47276 AATGCAGGAAAAACGGCATTACTCCACATGCTCAAA---TACA-ATTGCATGAAAGAGCA 47331 || ||||| ||||| | | || |||||||||||| ||| |||| | || || Sbjct 342808 AACGCAGGCAAAACCACTCTTCTTCACATGCTCAAAGATGACAGATTGGGTCAA----CA 342753 Query 47332 TAACCCTACATTACATCCGACCTCTGAACAACTAACAATTGCTGGCATAACATTTAGCAC 47391 | || ||| |||||||||| || ||| | ||| ||||||||| || || |||| || Sbjct 342752 TGTTCCAACACTACATCCGACATCAGAAAAGCTATTAATTGCTGGAATGACTTTTACAAC 342693 Query 47392 ATTTGATTTAGGAGGACACATTCAAGCGCGTAGAATGTGGCAAAATTATTTTCATGTCGT 47451 ||||| | || ||||||| ||||| || | || |||||||| | || | | Sbjct 342692 TCTTGATCTTGGTGGACACAAGCAAGCATGTCAGGTTTGAAAAAATTATCTCCAAGCAAT 342633 Query 47452 TGATGCTATAGTTTATATTGTAGACTGTGCAGATTTGACTAGACTGACAGAGGCAAAAAT 47511 | ||| || |||| | | || || | ||||||| || | || | || | ||| | Sbjct 342632 TAATGAGATTGTTTTTCTGGTGGATTCTGCAGATCATTCTGGCCTCATGGAATCTAAAGT 342573 Query 47512 CGAATTCGATGCGTTGTTAAACGATGAACTGTTACACGATGTTCCTATTTTAGTGTTGGG 47571 || | |||| || | | |||||| | || | |||| || || | | ||||| Sbjct 342572 TGAGCTTAATGCTTTAATGACTGATGAAATAATATCCAATGTGCCAATCCTTATATTGGG 342513 Query 47572 CAATAAAATCGACA-AACAA 47590 || ||||| |||| ||||| Sbjct 342512 TAACAAAATAGACAGAACAA 342493 >seq538 Length=4677643 Score = 104 bits (114), Expect = 2e-17 Identities = 253/380 (67%), Gaps = 9/380 (2%) Strand=Plus/Minus Query 47216 GTGTTGCAATTTTTAGGACTTTATGAAAAATCAGGGAAAATATTATTTCTCGGGTTAGAC 47275 ||| | || || ||||||| || | |||| || ||| | ||||| |||| || ||| Sbjct 342683 GTGCTCCAGTTCCTAGGACTCTACAAGAAATTTGGAAAACTTGTATTTTTCGGTTTGGAC 342624 Query 47276 AATGCAGGAAAAACGGCATTACTCCACATGCTCAAA---TACA-ATTGCATGAAAGAGCA 47331 || ||||| ||||| | | || |||||||||||| ||| |||| | || || Sbjct 342623 AACGCAGGCAAAACCACTCTTCTTCACATGCTCAAAGATGACAGATTGGGTCAA----CA 342568 Query 47332 TAACCCTACATTACATCCGACCTCTGAACAACTAACAATTGCTGGCATAACATTTAGCAC 47391 | || ||| |||||||||| || ||| | ||| ||||||||| || || |||| || Sbjct 342567 TGTTCCAACACTACATCCGACATCAGAAAAGCTATTAATTGCTGGAATGACTTTTACAAC 342508 Query 47392 ATTTGATTTAGGAGGACACATTCAAGCGCGTAGAATGTGGCAAAATTATTTTCATGTCGT 47451 ||||| | || ||||||| ||||| || | || |||||||| | || | | Sbjct 342507 TCTTGATCTTGGTGGACACAAGCAAGCATGTCAGGTTTGAAAAAATTATCTCCAAGCAAT 342448 Query 47452 TGATGCTATAGTTTATATTGTAGACTGTGCAGATTTGACTAGACTGACAGAGGCAAAAAT 47511 | ||| || |||| | | || || | ||||||| || | || | || | ||| | Sbjct 342447 TAATGAGATTGTTTTTCTGGTGGATTCTGCAGATCATTCTGGCCTCATGGAATCTAAAGT 342388 Query 47512 CGAATTCGATGCGTTGTTAAACGATGAACTGTTACACGATGTTCCTATTTTAGTGTTGGG 47571 || | |||| || | | |||||| | || | |||| || || | | ||||| Sbjct 342387 TGAGCTTAATGCTTTAATGACTGATGAAATAATATCCAATGTGCCAATCCTTATATTGGG 342328 Query 47572 CAATAAAATCGACA-AACAA 47590 || ||||| |||| ||||| Sbjct 342327 TAACAAAATAGACAGAACAA 342308 >seq532 Length=4604811 Score = 104 bits (114), Expect = 2e-17 Identities = 253/380 (67%), Gaps = 9/380 (2%) Strand=Plus/Minus Query 47216 GTGTTGCAATTTTTAGGACTTTATGAAAAATCAGGGAAAATATTATTTCTCGGGTTAGAC 47275 ||| | || || ||||||| || | |||| || ||| | ||||| |||| || ||| Sbjct 342727 GTGCTCCAGTTCCTAGGACTCTACAAGAAATTTGGAAAACTTGTATTTTTCGGTTTGGAC 342668 Query 47276 AATGCAGGAAAAACGGCATTACTCCACATGCTCAAA---TACA-ATTGCATGAAAGAGCA 47331 || ||||| ||||| | | || |||||||||||| ||| |||| | || || Sbjct 342667 AACGCAGGCAAAACCACTCTTCTTCACATGCTCAAAGATGACAGATTGGGTCAA----CA 342612 Query 47332 TAACCCTACATTACATCCGACCTCTGAACAACTAACAATTGCTGGCATAACATTTAGCAC 47391 | || ||| |||||||||| || ||| | ||| ||||||||| || || |||| || Sbjct 342611 TGTTCCAACACTACATCCGACATCAGAAAAGCTATTAATTGCTGGAATGACTTTTACAAC 342552 Query 47392 ATTTGATTTAGGAGGACACATTCAAGCGCGTAGAATGTGGCAAAATTATTTTCATGTCGT 47451 ||||| | || ||||||| ||||| || | || |||||||| | || | | Sbjct 342551 TCTTGATCTTGGTGGACACAAGCAAGCATGTCAGGTTTGAAAAAATTATCTCCAAGCAAT 342492 Query 47452 TGATGCTATAGTTTATATTGTAGACTGTGCAGATTTGACTAGACTGACAGAGGCAAAAAT 47511 | ||| || |||| | | || || | ||||||| || | || | || | ||| | Sbjct 342491 TAATGAGATTGTTTTTCTGGTGGATTCTGCAGATCATTCTGGCCTCATGGAATCTAAAGT 342432 Query 47512 CGAATTCGATGCGTTGTTAAACGATGAACTGTTACACGATGTTCCTATTTTAGTGTTGGG 47571 || | |||| || | | |||||| | || | |||| || || | | ||||| Sbjct 342431 TGAGCTTAATGCTTTAATGACTGATGAAATAATATCCAATGTGCCAATCCTTATATTGGG 342372 Query 47572 CAATAAAATCGACA-AACAA 47590 || ||||| |||| ||||| Sbjct 342371 TAACAAAATAGACAGAACAA 342352 >seq20 Length=170805979 Score = 104 bits (114), Expect = 2e-17 Identities = 253/380 (67%), Gaps = 9/380 (2%) Strand=Plus/Minus Query 47216 GTGTTGCAATTTTTAGGACTTTATGAAAAATCAGGGAAAATATTATTTCTCGGGTTAGAC 47275 ||| | || || ||||||| || | |||| || ||| | ||||| |||| || ||| Sbjct 29077126 GTGCTCCAGTTCCTAGGACTCTACAAGAAATTTGGAAAACTTGTATTTTTCGGTTTGGAC 29077067 Query 47276 AATGCAGGAAAAACGGCATTACTCCACATGCTCAAA---TACA-ATTGCATGAAAGAGCA 47331 || ||||| ||||| | | || |||||||||||| ||| |||| | || || Sbjct 29077066 AACGCAGGCAAAACCACTCTTCTTCACATGCTCAAAGATGACAGATTGGGTCAA----CA 29077011 Query 47332 TAACCCTACATTACATCCGACCTCTGAACAACTAACAATTGCTGGCATAACATTTAGCAC 47391 | || ||| |||||||||| || ||| | ||| ||||||||| || || |||| || Sbjct 29077010 TGTTCCAACACTACATCCGACATCAGAAAAGCTATTAATTGCTGGAATGACTTTTACAAC 29076951 Query 47392 ATTTGATTTAGGAGGACACATTCAAGCGCGTAGAATGTGGCAAAATTATTTTCATGTCGT 47451 ||||| | || ||||||| ||||| || | || |||||||| | || | | Sbjct 29076950 TCTTGATCTTGGTGGACACAAGCAAGCATGTCAGGTTTGAAAAAATTATCTCCAAGCAAT 29076891 Query 47452 TGATGCTATAGTTTATATTGTAGACTGTGCAGATTTGACTAGACTGACAGAGGCAAAAAT 47511 | ||| || |||| | | || || | ||||||| || | || | || | ||| | Sbjct 29076890 TAATGAGATTGTTTTTCTGGTGGATTCTGCAGATCATTCTGGCCTCATGGAATCTAAAGT 29076831 Query 47512 CGAATTCGATGCGTTGTTAAACGATGAACTGTTACACGATGTTCCTATTTTAGTGTTGGG 47571 || | |||| || | | |||||| | || | |||| || || | | ||||| Sbjct 29076830 TGAGCTTAATGCTTTAATGACTGATGAAATAATATCCAATGTGCCAATCCTTATATTGGG 29076771 Query 47572 CAATAAAATCGACA-AACAA 47590 || ||||| |||| ||||| Sbjct 29076770 TAACAAAATAGACAGAACAA 29076751 >seq511 Length=4795265 Score = 98.7 bits (108), Expect = 8e-16 Identities = 252/380 (66%), Gaps = 9/380 (2%) Strand=Plus/Minus Query 47216 GTGTTGCAATTTTTAGGACTTTATGAAAAATCAGGGAAAATATTATTTCTCGGGTTAGAC 47275 ||| | || || ||||||| || | |||| || ||| | ||||| |||| || ||| Sbjct 563612 GTGCTCCAGTTCCTAGGACTCTACAAGAAATTTGGAAAACTTGTATTTTTCGGTTTGGAC 563553 Query 47276 AATGCAGGAAAAACGGCATTACTCCACATGCTCAAA---TACA-ATTGCATGAAAGAGCA 47331 || ||||| ||||| | | || |||||||||||| ||| |||| | || || Sbjct 563552 AACGCAGGCAAAACCACTCTTCTTCACATGCTCAAAGATGACAGATTGGGTCAA----CA 563497 Query 47332 TAACCCTACATTACATCCGACCTCTGAACAACTAACAATTGCTGGCATAACATTTAGCAC 47391 | || ||| |||||||||| || ||| | ||| ||||||||| || || |||| || Sbjct 563496 TGTTCCAACACTACATCCGACATCAGAAAAGCTATTAATTGCTGGAATGACTTTTACAAC 563437 Query 47392 ATTTGATTTAGGAGGACACATTCAAGCGCGTAGAATGTGGCAAAATTATTTTCATGTCGT 47451 ||||| | || ||||||| |||| || | || |||||||| | || | | Sbjct 563436 TCTTGATCTTGGTGGACACAAGCAAGTATGTCAGGTTTGAAAAAATTATCTCCAAGCAAT 563377 Query 47452 TGATGCTATAGTTTATATTGTAGACTGTGCAGATTTGACTAGACTGACAGAGGCAAAAAT 47511 | ||| || |||| | | || || | ||||||| || | || | || | ||| | Sbjct 563376 TAATGAGATTGTTTTTCTGGTGGATTCTGCAGATCATTCTGGCCTCATGGAATCTAAAGT 563317 Query 47512 CGAATTCGATGCGTTGTTAAACGATGAACTGTTACACGATGTTCCTATTTTAGTGTTGGG 47571 || | |||| || | | |||||| | || | |||| || || | | ||||| Sbjct 563316 TGAGCTTAATGCTTTAATGACTGATGAAATAATATCCAATGTGCCAATCCTTATATTGGG 563257 Query 47572 CAATAAAATCGACA-AACAA 47590 || ||||| |||| ||||| Sbjct 563256 TAACAAAATAGACAGAACAA 563237 >seq46 Length=83257441 Score = 93.3 bits (102), Expect = 3e-14 Identities = 196/290 (68%), Gaps = 2/290 (1%) Strand=Plus/Minus Query 77394 TCCAGCCGTTCTGCTTCCAGTTCTTAACCCACTTAGTCACACCATTGATGGTGAACATGC 77453 |||| || || | |||||| | |||||| ||||| | |||||| || || ||||| | Sbjct 16684146 TCCACCCATTTTTCTTCCAACCTTGAACCCAGTTAGTTATACCATTTATCGTAAACATAC 16684087 Query 77454 TGTCTGTGTAGACGACCAGCTTCTTGATTTTGTTCTCCTGAGCTTGTTGCAGTGCTTTGG 77513 ||||||| || | ||||| || |||||||| | ||| ||||||| | || ||| Sbjct 16684086 TGTCTGTATACAGAACCAGTTTATTGATTTTCTGAGTCTGTGCTTGTTCAATGGCCTTGC 16684027 Query 77514 ATGCAGCCTGGATTTCAGCGCGCTGGTTTGTCTGTTGCCCCACAAGTCGCTCTGCAACAT 77573 | || || || ||||| || | ||||||||||| ||| ||||| | ||| Sbjct 16684026 AGGCTGCATGAATTTCCGCTCTTTGGTTTGTCTGCCACCCAGGAAGTCTAATGCCTACAG 16683967 Query 77574 TAAGCGGGTGATTATAACCCCAATATACGCCAATGCCAGCTCG-GGCTTGTTTCTGTCCG 77632 | | || | ||||| || |||| || || ||||| ||||| | | | || Sbjct 16683966 TTAAAGGATAGCCCGGCCCCCAGTAAACGCGGATTCCTGCTCGTGGCTT-TCTACGCCCA 16683908 Query 77633 TTTGATAAGCAACAGCCGTCAGTGTAGACCACCACGGCGTCACCCATGTA 77682 || |||| ||||| |||| |||||| || ||| ||| |||||||| Sbjct 16683907 TTACTGGAGCAGCAGCCATCAGCGTAGACGACGACGAAGTCTCCCATGTA 16683858 >seq50 Length=80373285 Score = 89.7 bits (98), Expect = 4e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGT 41106 ||||||| |||| || || ||| | || ||||| || || || |||| |||| Sbjct 670701 TGATGGCGCTGCCTCCATGCCATGCCCTCTGCCAGTTCTATGTGGTGAACAGTGAGCTGT 670760 Query 41107 CATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGA 41166 | || || |||| || ||||| || |||||||| || || || || || ||||| || | Sbjct 670761 CCTGCCAGCTGTACCAGAGATCGGGAGACATGGGCCTCGGTGTGCCTTTCAACATCGCCA 670820 Query 41167 GTTATGCTCTGCTCACGTATATGATTGCACAC 41198 | || || ||||||||||| |||||||| ||| Sbjct 670821 GCTACGCCCTGCTCACGTACATGATTGCGCAC 670852 >seq22 Length=145138636 Score = 89.7 bits (98), Expect = 4e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552 |||| || ||||||||||||||||| ||||| || ||||| |||||||| || ||||| | Sbjct 102208272 AAAATCCTTTTGATTTTATGGAAAACATTTCTTTAGAAGGAAAAACAAATTTCTTTGAGA 102208213 Query 44553 AACGCGTTGGAGAATATCAGCG 44574 |||| ||| ||| |||||||| Sbjct 102208212 AACGAGTTTCAGAGTATCAGCG 102208191 Score = 82.4 bits (90), Expect = 6e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 43698 GGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGG 43757 |||||||| | |||||||| || || | ||| || ||| ||||||| ||| | ||||||| Sbjct 102232231 GGTTTGTCATCTTTCCAATCCAGTACCCTGATATTTGGAAAATGTATAAACAGGCACAGG 102232172 Query 43758 CGTCATTTTGGACAGCAGAAGAAGT 43782 | || || |||||||||||||| || Sbjct 102232171 CTTCCTTCTGGACAGCAGAAGAGGT 102232147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397453200170890