Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homo_20sapiens_20[refseq_20GCF_5F000001405.37_202017-06-14] 578 sequences; 3,253,848,404 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq31 168 2e-36 seq44 150 4e-31 seq1 145 2e-29 seq46 141 2e-28 seq20 136 1e-26 seq64 132 1e-25 seq52 127 5e-24 seq33 114 3e-20 seq11 105 2e-17 seq21 104 6e-17 >seq31 Length=133275309 Score = 168 bits (186), Expect = 2e-36 Identities = 171/221 (77%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 ||||| |||||||| || ||||| || || || |||||||| ||||| || || ||| Sbjct 124913540 CAAATCTTCGTGAAGACACTCACTGGCAAGACCATCACCCTTGAGGTCGA--GCCCAGTG 124913483 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||||||||||||||||||| |||||| |||||||| ||||| || ||||| ||||||| Sbjct 124913482 ACACCATCGAGAACGTCAAAGCAAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAGC 124913423 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | | ||||| |||||||| ||||| |||||||| | || || | || || ||| Sbjct 124913422 AGAGGTTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 124913363 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| ||||| || || ||||| || || | | |||||| Sbjct 124913362 TCCAGAAAGAGTCTACCCTGCACCTGGTGCTCCGTCTCAGA 124913322 Score = 159 bits (176), Expect = 8e-34 Identities = 169/221 (76%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 ||||| |||||||| || ||||| || || || |||||||| ||||| || || ||| Sbjct 124913084 CAAATCTTCGTGAAGACACTCACTGGCAAGACCATCACCCTTGAGGTCGA--GCCCAGTG 124913027 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||| ||||||||||||||| |||||| || ||||| ||||| || ||||| ||||||| Sbjct 124913026 ACACTATCGAGAACGTCAAAGCAAAGATCCAAGACAAGGAAGGCATTCCTCCTGACCAGC 124912967 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | | ||||| |||||||| ||||| |||||||| | || || | || || ||| Sbjct 124912966 AGAGGTTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 124912907 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| ||||| || || ||||| || || | | |||||| Sbjct 124912906 TCCAGAAAGAGTCTACCCTGCACCTGGTGCTCCGTCTCAGA 124912866 Score = 159 bits (176), Expect = 8e-34 Identities = 169/221 (76%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| ||||| || || || || |||||||||||||| || || ||| Sbjct 124913768 CAGATCTTCGTGAAGACTCTGACTGGTAAGACCATCACCCTCGAGGTTGA--GCCCAGTG 124913711 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| ||||| |||||| || || || ||||| |||||||| ||||||| Sbjct 124913710 ACACCATCGAGAATGTCAAGGCAAAGATCCAAGATAAGGAAGGCATCCCTCCTGACCAGC 124913651 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || ||||||||||| |||||||| | || || | || || ||| Sbjct 124913650 AGAGGCTGATCTTTGCTGGAAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 124913591 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| ||||| || || ||||| || || | | |||||| Sbjct 124913590 TCCAGAAAGAGTCCACCCTGCACCTGGTGCTCCGTCTCAGA 124913550 Score = 152 bits (168), Expect = 1e-31 Identities = 160/207 (77%), Gaps = 5/207 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 ||||| |||||||| || || || || || || ||||||||||||||||| || ||| Sbjct 124911944 CAAATCTTCGTGAAGACCCTGACTGGTAAGACCATCACCCTCGAGGTGGA--GCCCAGTG 124911887 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| ||||| |||||| || || || ||||| |||||||| || |||| Sbjct 124911886 ACACCATCGAGAATGTCAAGGCAAAGATCCAAGATAAGGAAGGCATCCCTCCTGATCAGC 124911827 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | | ||||| || || |||||||| ||||||||| | || || | || || ||| Sbjct 124911826 AGAGGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGACGCACCCTGTCTGACTACAACA 124911767 Query 178102 TCCAAAAAGAATCAACACTGCATCTTG 178128 |||| ||||| || || ||||| |||| Sbjct 124911766 TCCAGAAAGAGTCCACTCTGCA-CTTG 124911741 Score = 145 bits (160), Expect = 2e-29 Identities = 158/208 (76%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 || || |||||||| || || || || || || ||||| |||||||||| ||| | | Sbjct 124912628 CAGATCTTCGTGAAGACCCTGACTGGTAAGACCATCACTCTCGAGGTGG--AGCCGAGTG 124912571 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||| ||||| |||||| || ||||| ||||| |||||||| ||||||| Sbjct 124912570 ACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCAGC 124912511 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | | ||||| || || |||||||| ||||||||| | || || | || || ||| Sbjct 124912510 AGAGGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGACGCACCCTGTCTGACTACAACA 124912451 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| ||||| || || ||||| || || Sbjct 124912450 TCCAGAAAGAGTCCACCCTGCACCTGGT 124912423 Score = 145 bits (160), Expect = 2e-29 Identities = 166/221 (75%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || ||||||||||||||||| || ||| Sbjct 124913312 CAGATCTTCGTGAAGACCCTGACTGGTAAGACCATCACCCTCGAGGTGGA--GCCCAGTG 124913255 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| ||||| |||||| || || || ||||| || ||||| || |||| Sbjct 124913254 ACACCATCGAGAATGTCAAGGCAAAGATCCAAGATAAGGAAGGCATTCCTCCTGATCAGC 124913195 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | | ||||| |||||||||||||| |||||||| | || || | || || ||| Sbjct 124913194 AGAGGTTGATCTTTGCCGGAAAACAGCTGGAAGATGGTCGTACCCTGTCTGACTACAACA 124913135 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| ||||| || || |||| || || | | |||||| Sbjct 124913134 TCCAGAAAGAGTCCACCTTGCACCTGGTACTCCGTCTCAGA 124913094 Score = 141 bits (156), Expect = 2e-28 Identities = 165/221 (75%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || ||||| ||||| ||||| || || Sbjct 124912856 CAGATCTTCGTGAAGACCCTGACTGGTAAGACCATCACTCTCGAAGTGGA--GCCGAGTG 124912799 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||| ||||| |||||| || ||||| ||||| |||||||| ||||||| Sbjct 124912798 ACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCAGC 124912739 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | | ||||| |||||||||||||| |||||||| | || || | || || ||| Sbjct 124912738 AGAGGTTGATCTTTGCCGGAAAACAGCTGGAAGATGGTCGTACCCTGTCTGACTACAACA 124912679 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| ||||| || || |||| || || | | |||||| Sbjct 124912678 TCCAGAAAGAGTCCACCTTGCACCTGGTGCTCCGTCTCAGA 124912638 >seq44 Length=90338345 Score = 150 bits (166), Expect = 4e-31 Identities = 168/224 (75%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | |||||||||||||| || || || || || |||||||||||||| ||| Sbjct 61055917 AAAATGC---AGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAA 61055861 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||| || || || || || || || ||||| |||| || |||||||| ||||| Sbjct 61055860 CCCTCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGGTAAGGAAGGAATTCCTCCT 61055801 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || ||||| |||| ||||| || || || ||||| ||||||||| | ||| | | || Sbjct 61055800 GATCAGCAGAGACTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGTACTTTGTCTGAC 61055741 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || | ||||| || || || || |||||||| |||||||| Sbjct 61055740 TACAATATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 61055697 >seq1 Length=248956422 Score = 145 bits (160), Expect = 2e-29 Identities = 167/224 (75%), Gaps = 3/224 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | |||||||||||||| || | || || || |||||||||||||| ||| Sbjct 192716180 AAAATGC---AGATTTTCGTGAAAACCCTTATGGGGAAGACCATCACCCTCGAGGTTGAA 192716236 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||| || || || || || || || ||||| ||||| || |||||||| ||||| Sbjct 192716237 CTCTCGGATACAATAGATAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCT 192716296 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || ||||| |||| ||||| || || || ||| | ||||||||| | ||| | | || Sbjct 192716297 GATCAGCAGAGACTGATCTTTGCTGGCAAGCAGTTGGAAGATGGACGTACTTTGTCTGAC 192716356 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || | ||||| || || || || |||||||| |||||||| Sbjct 192716357 TACAATATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 192716400 Score = 111 bits (122), Expect = 4e-19 Identities = 160/222 (72%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969 |||| ||||||| | || |||||||| || || || || || || |||||||| || | Sbjct 217850641 AGGTCAAAATGC---AGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAAG 217850585 Query 177970 TGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027 |||| || ||| |||||||||| || || || || || ||||| || ||||| || Sbjct 217850584 TGGA--GCCCAGTGACACCATCGAAAATGTGAAGGCCAATATCCAGGATAAGGAAGGCAT 217850527 Query 178028 CCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087 || || |||||||| | || ||||| || || | ||||| ||||| || | ||||| Sbjct 217850526 CCTCCCCGACCAGCAGAGGCTCATCTTTGCAGGCATGCAGCTAGAAGA-GGCTGTACTCT 217850468 Query 178088 TGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 | | || || ||| |||| ||||| | || ||| | || || Sbjct 217850467 TTCTGACTACAACATCCAGAAAGAGTTGACCCTGTACCTGGT 217850426 >seq46 Length=83257441 Score = 141 bits (156), Expect = 2e-28 Identities = 174/235 (74%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969 |||| ||||||| | || ||||||||||| || || || || || |||||||| |||| Sbjct 16381900 AGGTCAAAATGC---AGATCTTCGTGAAAACCCTTACCGGCAAGACCATCACCCTTGAGG 16381956 Query 177970 TGGAAAGCTCA--GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027 ||| ||| || ||||||||||| || || || ||||| ||||| || ||||| || Sbjct 16381957 TGG--AGCCCAGTGACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCAT 16382014 Query 178028 CCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087 || || |||||||| | || ||||| || || || ||||| |||||||| | ||||| Sbjct 16382015 TCCCCCCGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGTACTCT 16382074 Query 178088 TGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 | | || || ||| |||| || || || || ||||| || || || | || ||| Sbjct 16382075 TTCTGACTACAACATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGA 16382129 Score = 141 bits (156), Expect = 2e-28 Identities = 165/221 (75%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || |||||||| || ||||| || ||| Sbjct 16382139 CAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGA--GCCCAGTG 16382196 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||||||||| || || || ||||| ||||| |||||||| |||||||| ||||||| Sbjct 16382197 ACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCCGACCAGC 16382256 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || || || ||||| |||||||| | |||||| | || || ||| Sbjct 16382257 AGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAACA 16382316 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| || || || || ||||| || || || | || ||| Sbjct 16382317 TCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGA 16382357 Score = 136 bits (150), Expect = 1e-26 Identities = 156/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || ||||| || |||||||| || ||| Sbjct 16382367 CAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACTCTGGAGGTGGA--GCCCAGTG 16382424 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||||||||| || || || ||||| || || |||||||| ||||| || ||||||| Sbjct 16382425 ACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAAGAAGGCATCCCCCCCGACCAGC 16382484 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || || || ||||| |||||||| | |||||| | || || ||| Sbjct 16382485 AGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAACA 16382544 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| ||||| || || ||||| || || Sbjct 16382545 TCCAGAAAGAGTCGACCCTGCACCTGGT 16382572 Score = 136 bits (150), Expect = 1e-26 Identities = 164/221 (74%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || |||||||| || ||||| || ||| Sbjct 22204324 CAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGA--GCCCAGTG 22204381 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||||||||| || || || ||||| || || |||||||| ||||| || ||||||| Sbjct 22204382 ACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAAGAAGGCATCCCCCCCGACCAGC 22204441 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || || || ||||| |||||||| | | |||| | || || ||| Sbjct 22204442 AGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCAGTCTTTCTGACTACAACA 22204501 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| ||||| || || |||||||| || || | || ||| Sbjct 22204502 TCCAGAAAGAGTCGACCCTGCATCTGGTCCTGCGTCTGAGA 22204542 Score = 131 bits (144), Expect = 4e-25 Identities = 153/205 (75%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG--ACA 177984 || |||||||| || || || ||||| || |||||||| |||||||| || ||| ||| Sbjct 22204782 ATCTTCGTGAAGACCCTGACTGGAAAGACCATCACCCTGGAGGTGGA--GCCCAGTGACA 22204839 Query 177985 CCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAAC 178044 ||||||| || || ||| ||||| ||||| ||||||| ||||| || || ||||| Sbjct 22204840 CCATCGAAAATGTGAAAGCCAAGATCCAGGATGAAGAAGGCATCCCCCCCGATCAGCAGA 22204899 Query 178045 GACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCC 178104 | || ||||| || || || || | |||||||| | |||||| | || || | | ||| Sbjct 22204900 GGCTCATCTTTGCAGGCAAGAAGTTGGAAGATGGCCGCACTCTTTCTGACTACAGCATCC 22204959 Query 178105 AAAAAGAATCAACACTGCATCTTGT 178129 | ||||| || || ||||| || || Sbjct 22204960 AGAAAGAGTCGACCCTGCACCTGGT 22204984 Score = 123 bits (136), Expect = 6e-23 Identities = 162/224 (72%), Gaps = 3/224 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | |||||||||||||| || || || || || | ||||||| |||| ||| Sbjct 10258759 AAAATGC---AGATTTTCGTGAAAACCCTTACGGGGAAGACAACCACCCTCAAGGTTGAA 10258815 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 | || || || || || || || |||| ||||| || |||||||| ||||| Sbjct 10258816 CCGTTGGATACGATAGAAAATGTAAAGGCCGAGATCCAGGATAAGGAAGGAATTCCTCCT 10258875 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || |||||| ||| ||||| || || || || || ||||||||| | ||| | | | Sbjct 10258876 GATCAGCAAAGACCGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGGC 10258935 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || | |||||||| || || || ||| |||| |||||||| Sbjct 10258936 TACAATATTCAAAAAGAGTCTACTCTTCATTTTGTGTTGAGACT 10258979 Score = 123 bits (136), Expect = 6e-23 Identities = 162/221 (73%), Gaps = 5/221 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || |||||||| || ||||| || ||| Sbjct 22204552 CAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGA--GCCCAGTG 22204609 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||||||||| || || || ||||| || || |||||||| ||||| || || |||| Sbjct 22204610 ACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAAGAAGGCATCCC-CCCGATCAGC 22204668 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || || || ||||| |||||||| | |||||| | || || ||| Sbjct 22204669 AGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCGGTACTCTTTCTGACTACAACA 22204728 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| || || || || ||||| || || || | || ||| Sbjct 22204729 TCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGA 22204769 Score = 118 bits (130), Expect = 3e-21 Identities = 163/223 (73%), Gaps = 9/223 (4%) Strand=Plus/Plus Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969 |||| ||||||| || ||||||||||| || || || || | |||||||| || | Sbjct 22204085 AGGTCAAAATGCGG---ATCTTCGTGAAAACCCTTACCGGCAAGATCATCACCCTTGAAG 22204141 Query 177970 TGGAAAGCTCA--GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG-AA 178026 ||| ||| || | ||| ||||| || |||||| || || || || |||||||| || Sbjct 22204142 TGG--AGCCCAGTGCCACTATCGAAAATGTCAAAGCCAAAATCCAAGATAAAGAAGGCAA 22204199 Query 178027 TCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTC 178086 ||||| |||||||| | || ||||| || || || |||| |||||||| | | || Sbjct 22204200 TCCCT-GTGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCGGGAAGATGGCCGCAGTC 22204258 Query 178087 TTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 || | || || ||| |||| ||||| || || |||||||| || Sbjct 22204259 TTTCTGACTACAACATCCAGAAAGAGTCGACCCTGCATCTGGT 22204301 >seq20 Length=170805979 Score = 136 bits (150), Expect = 1e-26 Identities = 165/224 (74%), Gaps = 3/224 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | |||||| ||||||| || || | || || ||||||||||||| ||| Sbjct 113581498 AAAATGC---AGATTTTCTTGAAAACCCTTACGGAGAAGACCATCACCCTCGAGGCTGAA 113581554 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || || || || || || || || ||||| ||||| || |||||||| ||||| Sbjct 113581555 CCCTTGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCT 113581614 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || |||||| |||| ||||| || ||||| || || ||||||||| | ||| | | || Sbjct 113581615 GATCAGCAAAGACTGATCTTTGCTGGAAAGCAACTGGAAGATGGATGTACTTTGTCTGAC 113581674 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || | | ||||| || || || || |||||||| |||||||| Sbjct 113581675 TACAGTATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 113581718 >seq64 Length=156040895 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 177921 CTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA 177980 || || |||||||||||||| || | || || || |||||||| ||||| ||| |||| Sbjct 3717149 CTGCAGATTTTCGTGAAAACCCTAAGGGGGAAGACCATCACCCTTGAGGTTGAACCCTCA 3717208 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 || | || || || || || ||||| ||||| || |||||||| ||||| || ||| Sbjct 3717209 GATGCGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 3717268 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 ||| |||| ||||| || || || || || ||||||||| | ||| | | || | ||| Sbjct 3717269 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTGCAAC 3717328 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 | ||||| || | || || |||||| | ||||||| Sbjct 3717329 ATTCAAAAGGAGCCTACTCTTCATCTTTTGCTGAGACT 3717366 >seq52 Length=64444167 Score = 127 bits (140), Expect = 5e-24 Identities = 157/215 (73%), Gaps = 11/215 (5%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| || ||||| ||||| ||||||||| |||| ||| ||| || Sbjct 37049257 CAGATTTTCGTGAAAACCCTTACAGGGAAAACCATCACCCTCAAGGTTGAACCCTCGGAT 37049316 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || | || || || || ||||| ||||| || |||||||| ||||| || | |||| Sbjct 37049317 ACGACAGAAAATGTAAAGACCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCGGCAA 37049376 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| || || || || || || || ||||||| ||| || || ||| | Sbjct 37049377 AGACTAATATTTGCTGGCAAGCAACTGGAAGATG-------TCT----GACTACAACATT 37049425 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| || || || || |||||||| |||||||| Sbjct 37049426 CAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 37049460 >seq33 Length=107043718 Score = 114 bits (126), Expect = 3e-20 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 || || || ||||| || ||||| || || || |||||||| ||||| |||| || | Sbjct 58141283 CAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTC--AAGCCCACCG 58141340 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| |||| |||||| || ||||||||||| || || ||||| || ||||||| Sbjct 58141341 ACACCATTTAGAATGTCAAAACCAAAATTCAGGACAAGGAGGGTATCCCACCTGACCAGC 58141400 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || || || || || |||| ||| || ||||| ||||| | | || ||| Sbjct 58141401 AGCGTCTGATATTTGCTGGGAAACGGCTGGAGGATGGCCACACTCTCTCAGGCTACAACA 58141460 Query 178102 TCCAAAAAGAATCAACACT 178120 |||| ||||| || || || Sbjct 58141461 TCCAGAAAGAGTCCACCCT 58141479 >seq11 Length=242193529 Score = 105 bits (116), Expect = 2e-17 Identities = 166/235 (71%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969 |||| ||||||| | || |||||||| || || || | || || || |||| || | Sbjct 136329921 AGGTCAAAATGC---AGATCTTCGTGAAGACCCTTACCAGCAAGACCATTGCCCTTGAAG 136329865 Query 177970 TGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027 |||| || ||| |||||||||| || || || ||||| ||||| || ||||| || Sbjct 136329864 TGGA--GCCCAGGGACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCAT 136329807 Query 178028 CCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087 | ||||||||||| | || ||||| || | || ||| | ||||||| | |||| Sbjct 136329806 TACCCCGGACCAGCAGAGGCTCATCTTTGCAGTCAAGCAGGTGGAAGATGACTGCACTCA 136329747 Query 178088 TGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 | | || |||||| |||| ||||| | || ||||| || || || | || ||| Sbjct 136329746 TTCTGACTATAACATCCAGAAAGAGTAGACCCTGCACCTGGTCCTGTGTCTGAGA 136329692 >seq21 Length=159345973 Score = 104 bits (114), Expect = 6e-17 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 || || || ||||| || |||||||| || || |||||||||||||| | ||| || | Sbjct 25689956 CAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCG--AGCCCAGTG 25689899 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||||| ||||| ||||| | ||||| ||||| || || | || | ||||||| Sbjct 25689898 ACACCACTGAGAATGTCAAGGCCGAAATTCAAGACAAGGAGGGCGTTCCACTTGACCAGC 25689839 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 || | || || || | || |||||||| || ||||| | ||||| | || | ||| Sbjct 25689838 AATGTCTGATATTTGTGGGCAAACAGCTGGAGGATGGCCGTACTCTCTCAGACTGCAACA 25689779 Query 178102 TCCAAAAAGAATCAACACTGCATCT 178126 |||| ||||| || | ||||| || Sbjct 25689778 TCCAGAAAGAGTCCATCCTGCACCT 25689754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203722285618132