Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20fascicularis_20[refseq_20GCF_5F000364345.1_202013-06-12] 7,601 sequences; 2,946,843,737 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq293 98.7 9e-16 >seq293 Length=137757926 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | ||||| || | || ||| |||| |||||| ||| Sbjct 129296494 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 129296435 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | |||||| |||||| ||||| |||||||| ||||| || || Sbjct 129296434 GACACCATCGAGAACGTCAAAGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCAG 129296375 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||| | | ||| || || || ||||||| | | | | || || ||| Sbjct 129296374 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGACGCACCCTGTCTGACTACAAC 129296315 Query 24171 ATTCAAAAAGAATCTAC 24187 || || ||||| ||||| Sbjct 129296314 ATCCAGAAAGAGTCTAC 129296298 Score = 89.7 bits (98), Expect = 4e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | ||||| || | || ||| |||| || ||| ||| Sbjct 129296266 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTGGAGCCCAGT 129296207 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | ||||| |||||| ||||| |||||||| ||||| || || Sbjct 129296206 GACACCATCGAGAATGTCAAGGCAAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCAG 129296147 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 ||||| |||| | | ||| ||||| || ||||||| Sbjct 129296146 CAGAGGTTGATCTTTGCCGGAAAGCAGCTGGAAGATG 129296110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429896171938155