Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macaca_20fascicularis_20[refseq_20GCF_5F000364345.1_202013-06-12]
7,601 sequences; 2,946,843,737 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 2e-14
seq463 93.3 9e-14
seq186 91.5 3e-13
seq93 87.8 4e-12
>seq1
Length=227556264
Score = 95.1 bits (104), Expect = 2e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111
|||||||||||||||||||| |||||| ||||||||||||||| ||||| |||||||||
Sbjct 92567700 GTCTCTGTGGCGCAATGGACGAGCGCGCTGGACTTCTAATCCAGAGGTTCCGGGTTCGAG 92567759
Query 142112 CCCCGCCAGAGA 142123
|||| ||||||
Sbjct 92567760 TCCCGGCAGAGA 92567771
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 104285733 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 104285674
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 104285673 CCCACGTTGGGC 104285662
Score = 87.8 bits (96), Expect = 4e-12
Identities = 69/83 (83%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 142492 GGTGGTGAGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTC 142551
||||||| | ||||| |||||||||||| ||||||| ||||||||||||| ||||
Sbjct 172467431 GGTGGTGTAAAAGCCCAGTTAGCTCAGTCAGTAGAGCATGAGACTCTTAATCTCAGGGTC 172467490
Query 142552 GTGGGTTCGAGCCCCACATCGGG 142574
||||||| |||||||||| |||
Sbjct 172467491 ATGGGTTCAAGCCCCACATTGGG 172467513
>seq463
Length=78541002
Score = 93.3 bits (102), Expect = 9e-14
Identities = 69/81 (85%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 142495 GGTGAGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTG 142554
||| || ||||||| |||||||||||||||||| ||||||||||||| |||||||
Sbjct 3458127 GGTAAGGGAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTG 3458186
Query 142555 GGTTCGAGCCCCACATCGGGC 142575
|||||||||||||| | ||||
Sbjct 3458187 GGTTCGAGCCCCACGTTGGGC 3458207
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 3445861 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 3445802
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 3445801 CCCCACGTTGGGC 3445789
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 3429427 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 3429368
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 3429367 CCCACGTTGGGC 3429356
Score = 87.8 bits (96), Expect = 4e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||| ||
Sbjct 3437168 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCAAG 3437227
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 3437228 CCCCACGTTGGGC 3437240
>seq186
Length=181584905
Score = 91.5 bits (100), Expect = 3e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 181282880 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 181282821
Query 142564 CCCACATCGGGCAGA 142578
||||| | |||| ||
Sbjct 181282820 CCCACGTTGGGCGGA 181282806
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 181268466 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 181268525
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 181268526 CCCACGTTGGGC 181268537
>seq93
Length=170955103
Score = 87.8 bits (96), Expect = 4e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct 144008499 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCCCAGGGTCGTGGGTTCGAG 144008440
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 144008439 CCCCACGTTGGGC 144008427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027736701222441
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |