Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20fascicularis_20[refseq_20GCF_5F000364345.1_202013-06-12] 7,601 sequences; 2,946,843,737 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq355 96.9 2e-15 seq202 91.5 1e-13 >seq355 Length=112612857 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||||||||| || || || ||||| | | ||| || ||||| ||| | || | ||| | Sbjct 67551294 CAAAATGCAGATTTTCATGAAAACCCTTATGGGGAAGACCATCACCCTCGAGGCTGAACC 67551235 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 | |||| ||| | || | ||| | || ||||| || || | ||| | Sbjct 67551234 CTCAGATACGATATAAAATGTAAAGGCCGAGATCCAGGATAAGGAAGGAATTCCTCCTGA 67551175 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 || || ||||| |||||||||||||| ||||| |||||| | ||| || | || || Sbjct 67551174 TCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTA 67551115 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||||||| ||||| |||||||||||| | || || Sbjct 67551114 CAATATTCAAAAGGAGTCTACTCTTCATCTCGTGTT 67551079 >seq202 Length=171882078 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 21831 AAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCC 21890 |||||||| || || | ||||| | ||||| || ||||| ||| | || ||| || Sbjct 129945669 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 129945728 Query 21891 GCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAAC 21950 | || | | | | || | ||| || || ||||| || || | ||| | Sbjct 129945729 TCGGATATGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 129945788 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || || ||||| |||||||||||||| ||||| |||||| | ||| || | || ||| Sbjct 129945789 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 129945848 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 |||||||| ||||| |||||||||||| | || || Sbjct 129945849 AATATTCAAAAGGAGTCTACTCTTCATCTTGTGTT 129945883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358091624325754