Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20fascicularis_20[refseq_20GCF_5F000364345.1_202013-06-12] 7,601 sequences; 2,946,843,737 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq375 123 2e-23 seq428 118 8e-22 seq293 102 6e-17 seq274 95.1 1e-14 seq202 91.5 1e-13 seq163 89.7 4e-13 seq355 87.8 1e-12 seq30 82.4 6e-11 >seq375 Length=80997621 Score = 123 bits (136), Expect = 2e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || ||||| || || ||||| || | | ||| | | |||| |||| ||| Sbjct 16482708 TGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGC 16482767 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || |||||||| || | | ||| || ||||| ||||||||||| |||||||| ||||| Sbjct 16482768 TTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCTTGGATTTTG 16482827 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| |||| | |||||| | ||||| ||||| |||| || |||||||| Sbjct 16482828 GCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTCTTGCCGGTC 16482887 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || || || |||||||| Sbjct 16482888 AGGGTCTTCACGAAGATCTGCAT 16482910 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || || || || || ||||| || | | ||| | | |||| |||| ||| Sbjct 16482252 TGCAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGC 16482311 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || |||||||| || | | ||| || ||||| || ||||||||||||||||| || || Sbjct 16482312 TTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCTTGGATCTTG 16482371 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| |||| | |||||| | ||||| || || |||| || |||||||| Sbjct 16482372 GCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTC 16482431 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||||| || || |||||||| Sbjct 16482432 AGGGTTTTCACGAAGATCTGCAT 16482454 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || || || || || ||||| || | | ||| | | |||| |||| ||| Sbjct 16482480 TGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGC 16482539 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || |||||||| || | | ||| || ||||| || |||||||||||||| || || || Sbjct 16482540 TTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTATCCTGGATCTTG 16482599 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| |||| | |||||| | |||||||| || |||| || |||||||| Sbjct 16482600 GCCTTCACATTTTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTC 16482659 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || || || |||||||| Sbjct 16482660 AGGGTCTTCACGAAGATCTGCAT 16482682 >seq428 Length=75711847 Score = 118 bits (130), Expect = 8e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || ||||| || || ||||| || | || ||| | | |||| |||| || Sbjct 71761766 TGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCCATCTTCCAGCTGT 71761825 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || |||||||||| |||||| || || || || || || || || ||||||||||| Sbjct 71761826 TTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATTTTG 71761885 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| | || | |||||| | || || || || |||| |||||||| || Sbjct 71761886 GCTTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTTTTGCCCGTG 71761945 Query 101447 AAAGTTTTTACAAATATCTGCATGGTTACG 101476 | || || ||||| ||||||||| || || Sbjct 71761946 AGGGTCTTCACAAAGATCTGCATGTTTGCG 71761975 >seq293 Length=137757926 Score = 102 bits (112), Expect = 6e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || ||||| || || ||||| || | | || | |||| |||| ||| Sbjct 129296520 TGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGC 129296579 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| |||| | ||| || ||||| ||||||||||| |||||||| || ||| Sbjct 129296580 TTTCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTATCTTGGATCTTT 129296639 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | |||||| | || || ||||| |||| || ||||| || Sbjct 129296640 GCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTC 129296699 Query 101447 AAAGTTTTTACAAATATCTGCATGGT 101472 | || || || || |||||||| || Sbjct 129296700 AGGGTCTTCACGAAGATCTGCATTGT 129296725 >seq274 Length=96509753 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/212 (69%), Gaps = 11/212 (5%) Strand=Plus/Minus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 || || | |||||| ||||| || ||||| || ||||| || | |||| Sbjct 68626116 AACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGA-----------CATCT 68626068 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 ||||||||||| || ||||| |||| | || ||||| || ||||| ||||| ||||| Sbjct 68626067 TCCAATTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCC 68626008 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 || || || |||||| ||||| |||| | | ||| || ||||| |||| || Sbjct 68626007 TGGATATTGGCCTTTACATTTTCTGTTGTGTTCAAGGGTTCAACCTCAAGGGTGATGGTC 68625948 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || | ||||| || || |||||||| Sbjct 68625947 TTCCCTGTAAGGGTTTTCACGAAAATCTGCAT 68625916 >seq202 Length=171882078 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/203 (71%), Gaps = 5/203 (2%) Strand=Plus/Minus Query 101270 AGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTA 101329 ||||| || ||||| || || ||||| | | || ||| | | |||| |||| || || Sbjct 122414660 AGGGTGGACTCTTTCTGGATGTTGTAGCCTGAGAGAGTGCGGCCATCCTCCAGCTGTTTC 122414601 Query 101330 CCTGCAAATATCAAACGCTGTTGATCGGGCGGAATG-CCTTCTTTATCTTGAATTTTTTG 101388 || |||| ||||| |||||| || || || || || || || || ||||||||||| Sbjct 122414600 CCAGCAAGTATCAGACGCTGCTGGTCAGGTGGGATATCCCTCCTTGTCTTGAATTTTGGC 122414541 Query 101389 TTTTACAATTTCTACA--GTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| ||||| | |||||| | || | ||||| |||| || ||||| || Sbjct 122414540 TTTGACA--TTCTAAATGGTGTCACTGGGCTCAATCTCAAGGGTGATGGTCTTGCCCGTG 122414483 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || ||||| |||||||| Sbjct 122414482 AGGGTCTTCACAAAGATCTGCAT 122414460 >seq163 Length=189454096 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/212 (70%), Gaps = 5/212 (2%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAG--TTCTGGCATCGTCCAATT 101324 || ||||| || |||| | || ||||| || | || || | | | |||| |||| | Sbjct 87956251 TGCAGGGTGGACTCTT---GGATGTTGTAGTCTGAGAGAGAGTGCGGCCATCTTCCAGCT 87956195 Query 101325 GCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTT 101384 | || | |||||||||| |||||| || || || || || || || || |||||||||| Sbjct 87956194 GTTTGCTGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATTT 87956135 Query 101385 TTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGG 101444 | ||| || | || | |||||| | || || ||||| |||| |||||||| | Sbjct 87956134 TGGCTTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTTTTGCCCG 87956075 Query 101445 TTAAAGTTTTTACAAATATCTGCATGGTTACG 101476 | || || ||||| ||||||||| || || Sbjct 87956074 GGAGGGTCTTCACAAAGATCTGCATGTTTGCG 87956043 >seq355 Length=112612857 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 101272 GGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACC 101331 ||| || | |||||| || ||||| || | || ||| | | |||| |||| ||||| || Sbjct 56763058 GGTGGACTGTTTTTGGATGTTGTAGTCTGAGAGAGTGCAGCCATCCTCCAGCTGCTTGCC 56763117 Query 101332 TGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTT 101391 |||||||||| || ||| || || || || || || ||||| ||||||||||| ||| Sbjct 56763118 AGCAAATATCAGACACTGCTGGTCAGGTGGGATACCCTCTTTGTCTTGAATTTTGGCTTT 56763177 Query 101392 TACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGT 101451 | | | || |||| | | || || ||||| ||| || ||||| || | || Sbjct 56763178 GAAATTCTCAGTGGTGTAACTGGGCTCGACCTCAAGGATGATGGTCTTGCCCGTGAGGGT 56763237 Query 101452 TTTTACAAATATCTGCAT 101469 | ||||| | |||||| Sbjct 56763238 CTCCACAAAGAGCTGCAT 56763255 >seq30 Length=192460366 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || |||| || | ||| || | || ||||| | |||| |||| || Sbjct 20003083 TGCAGGGTGGACTCTTCCCAGATGTCGTAGTCTGAGAGAGTTCGGCCATCCTCCAGCTGT 20003142 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || |||| ||||| | |||| || || || || || || || || ||||||||||| Sbjct 20003143 TTGCCGGCAAGTATCAGATGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATTTTG 20003202 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| || |||||| | | || |||||||||| || ||||| || Sbjct 20003203 GCTTTGACATCCTCATTGGTGTCACTGGGCTTGACCTCAAGAGTGATGGTCTTGCCCGTA 20003262 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || ||||| |||||||| Sbjct 20003263 AGGGTCTTCACAAAGATCTGCAT 20003285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396241689883557