Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20fascicularis_20[refseq_20GCF_5F000364345.1_202013-06-12] 7,601 sequences; 2,946,843,737 total letters Query= NC_019559.1 Length=202946 Score E Sequences producing significant alignments: (Bits) Value seq30 132 6e-26 >seq30 Length=192460366 Score = 132 bits (146), Expect = 6e-26 Identities = 189/266 (71%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 153745 CCCGCGTCCCTCAGATGCTCGTTGAAAACTACACAAGAACCTTTAATTGTAACGTGGCAA 153804 || || ||| | |||||||| || ||| | | || ||| | ||||| || ||||| Sbjct 159851905 CCTGCTTCCTTAAGATGCTCTCTGCAAAATGCCCAGGAAGTCCTGATTGTGACATGGCAG 159851846 Query 153805 AAGAAGAAAGCTGTAGGTCCAGAAAATATGGCCACGTATAGCAAAGCCCACGGTGTAGTG 153864 || |||||||||||| | |||||||| |||| ||| | ||| | ||| || || ||| Sbjct 159851845 AAAAAGAAAGCTGTAAGCCCAGAAAACATGGTCACCTTCAGCGAGAACCATGGGGTGGTG 159851786 Query 153865 CTTCAGCCCACATATAAAGATAGAATTAATATAACCGAATTAGGTCTTTTAAACAGTAGT 153924 | ||||| | ||||| || | || || || ||| | | || || ||||| | Sbjct 159851785 ATCCAGCCTGCCTATAAGGACAAGATAAACATTACCCAGCTGGGACTCCAAAACACAACC 159851726 Query 153925 ATAACGTTTTGGAATGCAACACTGGATGATGAAGGCTGTTATATGTGTCTGTTTAATATG 153984 || || || |||||| || ||||| |||||||| ||||| |||||||| || |||| Sbjct 159851725 ATCACCTTCTGGAATATCACCCTGGAGGATGAAGGGTGTTACATGTGTCTCTTCAATACC 159851666 Query 153985 TTCGGTTCTGGTAAGGTATCGGGAAC 154010 || |||||||| ||| | || ||||| Sbjct 159851665 TTTGGTTCTGGGAAGATCTCAGGAAC 159851640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 649237508459760