Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20fascicularis_20[refseq_20GCF_5F000364345.1_202013-06-12] 7,601 sequences; 2,946,843,737 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 3e-11 >seq1 Length=227556264 Score = 84.2 bits (92), Expect = 3e-11 Identities = 196/296 (66%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 214605 AAGGAGATAGCTGTCGAGCTGGAGGCCTTCTACGGTGATATCGAAGCCGTCGAACTCTAC 214664 ||||| || ||| ||| |||| || |||| ||||| ||||| || || || || || Sbjct 44617989 AAGGAAATGTCTGCAGAGTTGGAAGCACTCTATGGTGACATCGATGCTGTGGAGCTGTAT 44617930 Query 214665 GCTGATTTCCTCGCTGAAAAACCGTGTCCCGATGCCATCCTCGGTGACGGCGTCCTCGAG 214724 ||| | || | ||||| || |||| ||||||||| | ||||| | | | || Sbjct 44617929 CCTGCCCTTCTGGTAGAAAAGCCTCGTCCAGATGCCATCTTTGGTGAGACCATGGTAGAA 44617870 Query 214725 TCGGGGGCTCCGTTCTCCCTGAGGGGACTCGCGGCGAACGTCATCTGCTCCCCGGGCTAC 214784 || || || |||||| ||| ||||| || || || || || || || | |||| Sbjct 44617869 GTTGGAGCACCATTCTCCTTGAAAGGACTTATGGGTAATGTTATATGTTCTCCTGCCTAC 44617810 Query 214785 TGGAAACGCAACACACTCGGTAGCTCCGCGAGTTTCAACATCGTGAGGAGCGCGACCCTT 214844 ||||| | | ||| | ||| | | | |||| | ||| | | | || | || Sbjct 44617809 TGGAAGCCAAGCACTTTTGGTGGAGAAGTGGGTTTTCAAATCATCAACACTGCCTCAATT 44617750 Query 214845 CAGTCTCTCATCTGTAGCAACGTCAAGGGATGTCCGTTAGCCGCATTCCGAGCTCC 214900 |||||||||||||| | ||||| ||||| ||||| || | ||||| | | ||| Sbjct 44617749 CAGTCTCTCATCTGCAATAACGTGAAGGGCTGTCCCTTTACTTCATTCAGTGTTCC 44617694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723272073582240