Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20mulatta_20[refseq_20GCF_5F000772875.2_202015-11-30] 284,728 sequences; 3,236,224,332 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq18 98.7 8e-16 >seq18 Length=70235451 Score = 98.7 bits (108), Expect = 8e-16 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| ||| |||||||| || | | || ||||| || || | ||| |||| | ||| Sbjct 8839206 ATGGCACTGCCTCCATGCCATGCTCTCTGCCAGTTCTATGTGGTGAACAGTGAGCTGTCC 8839147 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 ||||| | |||||||||||||| || |||||||| || || || |||||||| || | Sbjct 8839146 TGCCAGCTGTACCAGAGATCGGGAGACATGGGCCTAGGTGTGCCTTTCAACATCGCCAGC 8839087 Query 19092 TATGCACTTCTTACCTACATAGTAGCGCA 19120 || || || || |||||||| | ||||| Sbjct 8839086 TACGCCCTGCTCACCTACATGATTGCGCA 8839058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398117672180760