Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20mulatta_20[refseq_20GCF_5F000772875.2_202015-11-30] 284,728 sequences; 3,236,224,332 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq3 102 7e-17 >seq3 Length=185818997 Score = 102 bits (112), Expect = 7e-17 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||| || ||| | || ||||| || || ||| |||| ||||| | || Sbjct 82519527 ATGCAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 82519586 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| || | ||| |||| |||||| || || || ||| | || |||||||| Sbjct 82519587 GACACCACTGAGAATGTCAAGGCCAAAATTCAAGCCAAGGAGGGCATCCCACTTGACCAG 82519646 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || ||| | |||| |||||||||||| ||||| ||| | ||| | || | || | Sbjct 82519647 CAGCGTCTGATATTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTGCAAC 82519706 Query 25012 ATACAGAAAGAGGCCA 25027 || ||||||||| ||| Sbjct 82519707 ATCCAGAAAGAGTCCA 82519722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 416852433877760