Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20mulatta_20[refseq_20GCF_5F000772875.2_202015-11-30] 284,728 sequences; 3,236,224,332 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq18 138 1e-27 >seq18 Length=70235451 Score = 138 bits (152), Expect = 1e-27 Identities = 129/164 (79%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 |||||||||||| ||| || |||| || || || |||||||||||||||||||| || | Sbjct 8839044 TCAGGCCCGTGATGTGCGCAATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAAG 8839103 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 | || || ||||||||||| | || |||||||||||||||||||||||||| | Sbjct 8839104 GCACACCTAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCA 8839163 Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC 21152 |||| || ||||| || | | | || || ||||| || |||||| Sbjct 8839164 CCACATAGAACTGGCAGAGAGCATGGCATGGAGGCAGTGCCATC 8839207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426291564877440