Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20mulatta_20[refseq_20GCF_5F000772875.2_202015-11-30] 284,728 sequences; 3,236,224,332 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq21 334 1e-86 seq8 116 5e-21 seq13 114 2e-20 seq14 113 6e-20 seq114127 98.7 1e-15 seq237451 96.9 5e-15 seq128769 96.9 5e-15 seq128457 96.9 5e-15 seq226669 91.5 2e-13 seq73905 91.5 2e-13 seq244122 87.8 2e-12 seq9 87.8 2e-12 >seq21 Length=149150640 Score = 334 bits (370), Expect = 1e-86 Identities = 641/938 (68%), Gaps = 25/938 (3%) Strand=Plus/Plus Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774 |||| |||||| |||| || | |||| ||| ||| | || |||| |||||||| Sbjct 44400519 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGATTCGACACCACTCCCATCC 44400578 Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834 | || || || || | || || || || || ||||||| | ||| ||||| | Sbjct 44400579 TCTGATACTCCTTTACTCTCTTCTCAAAGAAGTTCGTCTTTC-----AGTGAAATATTCT 44400633 Query 41835 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 41894 |||| || ||||| || || || | ||| || |||| |||| ||| | || Sbjct 44400634 CCATAAAGTCAAATGGGTTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCGGCATG- 44400692 Query 41895 ATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 41954 ||| ||||| | || || || ||| ||||| | |||||||| || || || | Sbjct 44400693 -TCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 44400751 Query 41955 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 42014 | || || | ||| |||| || ||||| ||||| || || || | | || | Sbjct 44400752 TCACAGGCAAGGCCTCAGTGAGGAATTCCTGTTCTATCCGAACAGCATTGATAATTCTTT 44400811 Query 42015 ATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 42074 ||||||| | || || ||| | | | || || ||||||| || || |||| Sbjct 44400812 CTCTTACTCTCTCCTCCAATGGTTTGTGTACCAGGTGATTGAACATCAGGCAAGCAAAAT 44400871 Query 42075 CGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 42134 | ||||| | ||||||||||| |||||| | ||| |||||||| ||||| || ||||| | Sbjct 44400872 CACAGTGTAAACCCTCATCTCCACTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCA 44400931 Query 42135 GGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTA 42194 | || || || || ||||| ||||| || ||||| | |||||||||| | ||||| Sbjct 44400932 GTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAGATG---CCTTCCG 44400988 Query 42195 CTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTTTT 42251 |||| |||||| | | || | || ||||| | | || |||| ||||| | Sbjct 44400989 CTGCAGCAAAGACTACAACACGTTCCCCATAGGTAGCTGCTTTGTCCCCAATCCAGTGCA 44401048 Query 42252 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGt 42311 |||||||| |||||||| || ||||||||||||||||| |||||||| ||| || | | Sbjct 44401049 AGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGCGAAATT 44401108 Query 42312 ttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAA 42371 |||| || |||||| | || || || || | | |||||||||| | ||||| | Sbjct 44401109 CCCTTTCTTTGGGATCTTTTATGTAAGTGTCAATAAGGAAACTATACATTCCAGAATGTA 44401168 Query 42372 TGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTG 42431 ||||||| ||||| || || || || ||||||| | ||| || || ||||| |||||| Sbjct 44401169 TGTTTTCCATGGCAATTTGGAAGCCACAGAAACAGCGGGCTTCTGTCACCTGAACTTCTT 44401228 Query 42432 TACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCA 42491 | | |||| || | || ||| | || ||||| || ||||| || ||||| || ||| Sbjct 44401229 GGCTACATCGCTCCACCAAGTTTGCATTTACTATGCCATCACTTGC-GCAAAGAAAACCA 44401287 Query 42492 ATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTG----ATA 42547 ||||| |||||||||| | || | ||| || | ||||| || || || Sbjct 44401288 GAACATGGGATATAAAATATCTCTCCT-CGGGCTTCAGGAATTCC---CAGTGCCAAATG 44401343 Query 42548 TCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATA 42607 || || || || || || || | ||||| || || ||||| ||||| |||||||| Sbjct 44401344 TCCTTGGACGGGTCCACCTCCTCGGCGGTCCAGAAGGAAGCTTCCGCCTTCTTATACATC 44401403 Query 42608 TTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 | |||||||||||| || | || ||||| || ||||| Sbjct 44401404 TGCCAGATATCATGGTACTCGATGGGGAAGATGACAAA 44401441 Score = 203 bits (224), Expect = 4e-47 Identities = 382/554 (69%), Gaps = 16/554 (3%) Strand=Plus/Minus Query 42077 CAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGG 42136 ||||| | ||||||||| || ||||| | ||| |||||||| ||||| || ||||| || Sbjct 137949051 CAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGT 137948992 Query 42137 CCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACT 42196 || | || || ||||| ||||| ||||| || |||||||||||| | | ||| ||| Sbjct 137948991 CCTTGTTTCTTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGAAGGTGCTTTCCACT 137948932 Query 42197 GCCGCAAAGGCAATAAGTCTCTCTCCAT---AACCGGCACTGTCATGTATCC-ACTTTTG 42252 |||||||| || | ||||||| | || | ||| |||| || | Sbjct 137948931 AGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACGTCTTTGTTCCCAATCCAACACAAG 137948872 Query 42253 AGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtt 42312 | ||||| | |||||||| || |||| |||||| ||| | |||||||| |||||| | | Sbjct 137948871 A-CCCAAACTGCCTTCTTCTTGACAC-AGGCATTGTTCCAATGGCATTGAAGAGAAATTC 137948814 Query 42313 tttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAAT 42372 |||| || |||||||| || ||| || || | ||||||| || || ||||| || Sbjct 137948813 CCTTTCTTTGTTATCTTTA--ATGTGTGTCAATAAGGAGACTATTTATGTCAGAATGTAT 137948756 Query 42373 GTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGT 42432 |||||| | || || || || || ||||| || || || |||| ||| | |||| Sbjct 137948755 GTTTTCTGTAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAATCTGAATTTCTTG 137948696 Query 42433 ACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 42492 | |||| |||| | || ||||| | ||||| || |||| |||||||| || |||| Sbjct 137948695 AACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGCTGCAAAGAAAGCCAG 137948636 Query 42493 TACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTG----ATAT 42548 | || |||||||||| |||| || || || | |||| || || || | Sbjct 137948635 AATATAGGATATAAAATATCTTTCCTCAGG-CTTCAGGGCTTCC---CAGTGCCAAATGT 137948580 Query 42549 CTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATAT 42608 | || || | || || || | || |||| || || | ||| | || |||||| | | Sbjct 137948579 CCTTGGACAGATTCACCTCCTGGGCCATCCAGAAAGAAACCTCTACTTTCTTATACGTTT 137948520 Query 42609 TCCAGATATCATGA 42622 |||| ||||||||| Sbjct 137948519 TCCAAATATCATGA 137948506 >seq8 Length=144306982 Score = 116 bits (128), Expect = 5e-21 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 42089 TCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 42148 |||||||| || || | ||| |||||||| |||||||| ||||| || || | ||| || Sbjct 100933383 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCTTT 100933442 Query 42149 AGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGC 42207 ||||| ||||||| ||||| ||||| || ||||| ||||||||||| || |||||||| Sbjct 100933443 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 100933501 >seq13 Length=108979918 Score = 114 bits (126), Expect = 2e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||||||||| || || | ||| |||||||| ||||| || ||||| || || || || | Sbjct 10124958 CCTCATCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 10124899 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| ||||| || ||||| || || ||||||||||| ||||| ||||| ||||||| Sbjct 10124898 TGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATGCCTTCCACTGCGGCAAAGG 10124839 Query 42207 C 42207 | Sbjct 10124838 C 10124838 Score = 95.1 bits (104), Expect = 2e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 42325 ATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGC 42384 |||||| | || || || || | ||||||||||||||| ||||| |||||||| ||||| Sbjct 10122854 ATCTTTTATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGC 10122795 Query 42385 CATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTC 42444 || || || || |||||||| | ||| || |||| ||| |||||| | |||||| || Sbjct 10122794 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 10122735 Score = 87.8 bits (96), Expect = 2e-12 Identities = 118/163 (72%), Gaps = 6/163 (4%) Strand=Plus/Minus Query 41697 AAATATCGGCATTTAT---GTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTT 41753 ||||| ||||| | | ||| |||| |||||| |||| || | |||| ||| ||| Sbjct 10127135 AAATAAGGGCATATCTTCAGTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTG 10127076 Query 41754 CTTGA---GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAG 41810 | || ||||| |||||||| | || || || || || | || || || || |||| Sbjct 10127075 TTGGACTTGACATCACTCCCATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAG 10127016 Query 41811 TCTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATT 41853 |||||||||||| ||| ||||| ||||| || ||||| || || Sbjct 10127015 TCTTTCCTTCCAGTGAAATATTCTCCATAAAGTCAAATGGGTT 10126973 >seq14 Length=127894412 Score = 113 bits (124), Expect = 6e-20 Identities = 106/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 72021 TACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 72080 |||||||||||| |||||||| |||||||||||||| | || |||||||||| | || Sbjct 63315446 TACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTG 63315505 Query 72081 CTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 72140 |||||| |||||||| ||||| || | ||| ||||| | | || || ||||||| || Sbjct 63315506 CTCCTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCAAGG 63315565 Query 72141 TTCCAAGTATATGGC 72155 |||| ||| || || Sbjct 63315566 CTCCAGGTAAATAGC 63315580 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927 |||| || || || |||||||| || |||||| |||| |||| || || ||||| |||| Sbjct 63301081 TCCAGCCATAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATAT 63301140 Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987 ||| || || |||||||| ||||| || || || || || ||||| || | | || | Sbjct 63301141 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCATCTTGAGAACGGTTT 63301200 Query 70988 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 71038 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 63301201 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 63301251 Score = 105 bits (116), Expect = 9e-18 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202 || ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | Sbjct 63303929 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATG 63303988 Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGA 71262 ||||||||||| |||| || |||||||| || || || ||||| || || | | || | Sbjct 63303989 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 63304048 Query 71263 CTATTTCTAAGACCAT 71278 || ||||| | ||||| Sbjct 63304049 CTGTTTCTTATACCAT 63304064 Score = 91.5 bits (100), Expect = 2e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 71381 CATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCAT 71440 |||| || |||||||| || | | | ||| || ||||| || || || | || |||| Sbjct 63309165 CATAGGTTTCGTATGGGCCCTGCTCCTTGGCAAGGTCACAGCTGGCTTCCAGGGCGCCAT 63309224 Query 71441 AATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGAT 71500 ||||||| ||||| || |||| |||||| || ||| ||||| | || ||||| || | Sbjct 63309225 AATAAATAGTTTCAAAGATCTGCTTATTTAGTAATTGGGCTTCTGCACTCTCAAAAGGGT 63309284 Query 71501 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTC 71560 | | | || ||||| || ||||| | ||||| || ||||| || || || | || | Sbjct 63309285 ATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGAC 63309344 Query 71561 TCTTATTAGA 71570 ||||| || Sbjct 63309345 GTTTATTTGA 63309354 >seq114127 Length=15708 Score = 98.7 bits (108), Expect = 1e-15 Identities = 238/356 (67%), Gaps = 7/356 (2%) Strand=Plus/Plus Query 39798 TCCAGTTGATCCAAATCCTTGAGCTCCTCTATCTGTACTATCTAGAGATTGTACTTCTTC 39857 |||||| || ||||| || | || || || || ||| | || ||| |||||||| Sbjct 9540 TCCAGTGGAACCAAAACCGCCTGAACCCCTTTCGGTGTCATCCAAAGCTTGAACTTCTTC 9599 Query 39858 CAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCCGTATTTAC 39917 | ||||| |||| | || |||| | || || || || |||| ||| ||| | || || Sbjct 9600 TATTTCTGCATAAAAAATCCGTTCGCAAATGAGTTGTGCAATTCGATCACCCTTTTTGAC 9659 Query 39918 ATTGAAAGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATCTTC 39977 | || | ||| ||| ||||| || | || || | ||||| ||||||||||| Sbjct 9660 TTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCCTCTATAATCTTC 9719 Query 39978 GTCTATTACACCGCCTCCTATATCAATA---CCTTTTAGGGACAGACCAGACCTAGGAGC 40034 ||||| ||||| |||||| ||||||| |||| | || || ||||| ||||| Sbjct 9720 ATCTATGACACCAGCTCCTACATCAATAAAGTGTTTTGCAGCCAAGCCTGACCTTGGAGC 9779 Query 40035 TATTCTACCATAGCAGAACTTAGGCATGGACATACTAATATCTGTCTTAATTAACTGTCT 40094 || ||| ||||| || ||| | | || ||| || || || | || | || Sbjct 9780 TACTCTTCCATAACACCCAGAAGGGAGCGCTATCTGAATGTCCGTTTTCA-CAAGAG-CT 9837 Query 40095 TTCTCC--CGGAGGGATAGTATAATCGTAAGCGCTATACAAATCATATCCAGCGGC 40148 |||||| || || || |||||||| || || || |||| || || || ||||| Sbjct 9838 TTCTCCATAGGTGGTATTGTATAATCATAGGCACTGTACAGGTCGTAGCCCGCGGC 9893 >seq237451 Length=7360 Score = 96.9 bits (106), Expect = 5e-15 Identities = 214/317 (68%), Gaps = 7/317 (2%) Strand=Plus/Plus Query 39837 ATCTAGAGATTGTACTTCTTCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGC 39896 ||| | || ||| |||||||| | |||||||||| | || |||| | || || || || Sbjct 372 ATCCAAAGCTTGAACTTCTTCTATTTCTGGATAAAAAATCCGTTCGCAAATGAGTTGTGC 431 Query 39897 TATTCTATCTCCCGTATTTACATTGAAAGTACATTTTCCATTATTAATAAGAATGACTCC 39956 |||| ||| ||| | || || | || | ||| ||| ||||| || | || || Sbjct 432 AATTCGATCACCCTTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACC 491 Query 39957 TATGTTTCCCCTATAATCTTCGTCTATTACACCGCCTCCTATATCAATA---CCTTTTAG 40013 | ||||| ||||||||||| ||||| ||||| |||||| ||||||| |||| Sbjct 492 AACATTTCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCAATAAAGTGTTTTGC 551 Query 40014 GGACAGACCAGACCTAGGAGCTATTCTACCATAGCAGAACTTAGGCATGGACATACTAAT 40073 | || || |||| ||||||| ||| ||||| || ||| | | || ||| Sbjct 552 AGCCAAGCCTGACCGTGGAGCTACTCTTCCATAACACCCAGAAGGGAGCGCTATCTGAAT 611 Query 40074 ATCTGTCTTAATTAACTGTCTTTCTCC--CGGAGGGATAGTATAATCGTAAGCGCTATAC 40131 || || || | || | |||||||| || || || |||||||| || || || ||| Sbjct 612 GTCCGTTTTCA-CAAGAG-CTTTCTCCATAGGTGGTATTGTATAATCATAGGCACTGTAC 669 Query 40132 AAATCATATCCAGCGGC 40148 | || || || ||||| Sbjct 670 AGGTCGTAGCCCGCGGC 686 >seq128769 Length=6953 Score = 96.9 bits (106), Expect = 5e-15 Identities = 214/317 (68%), Gaps = 7/317 (2%) Strand=Plus/Minus Query 39837 ATCTAGAGATTGTACTTCTTCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGC 39896 ||| | || ||| |||||||| | |||||||||| | || |||| | || || || || Sbjct 6582 ATCCAAAGCTTGAACTTCTTCTATTTCTGGATAAAAAATCCGTTCGCAAATGAGTTGTGC 6523 Query 39897 TATTCTATCTCCCGTATTTACATTGAAAGTACATTTTCCATTATTAATAAGAATGACTCC 39956 |||| ||| ||| | || || | || | ||| ||| ||||| || | || || Sbjct 6522 AATTCGATCACCCTTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACC 6463 Query 39957 TATGTTTCCCCTATAATCTTCGTCTATTACACCGCCTCCTATATCAATA---CCTTTTAG 40013 | ||||| ||||||||||| ||||| ||||| |||||| ||||||| |||| Sbjct 6462 AACATTTCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCAATAAAGTGTTTTGC 6403 Query 40014 GGACAGACCAGACCTAGGAGCTATTCTACCATAGCAGAACTTAGGCATGGACATACTAAT 40073 | || || |||| ||||||| ||| ||||| || ||| | | || ||| Sbjct 6402 AGCCAAGCCTGACCGTGGAGCTACTCTTCCATAACACCCAGAAGGGAGCGCTATCTGAAT 6343 Query 40074 ATCTGTCTTAATTAACTGTCTTTCTCC--CGGAGGGATAGTATAATCGTAAGCGCTATAC 40131 || || || | || | |||||||| || || || |||||||| || || || ||| Sbjct 6342 GTCCGTTTTCA-CAAGAG-CTTTCTCCATAGGTGGTATTGTATAATCATAGGCACTGTAC 6285 Query 40132 AAATCATATCCAGCGGC 40148 | || || || ||||| Sbjct 6284 AGGTCGTAGCCCGCGGC 6268 >seq128457 Length=7192 Score = 96.9 bits (106), Expect = 5e-15 Identities = 214/317 (68%), Gaps = 7/317 (2%) Strand=Plus/Plus Query 39837 ATCTAGAGATTGTACTTCTTCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGC 39896 ||| | || ||| |||||||| | |||||||||| | || |||| | || || || || Sbjct 372 ATCCAAAGCTTGAACTTCTTCTATTTCTGGATAAAAAATCCGTTCGCAAATGAGTTGTGC 431 Query 39897 TATTCTATCTCCCGTATTTACATTGAAAGTACATTTTCCATTATTAATAAGAATGACTCC 39956 |||| ||| ||| | || || | || | ||| ||| ||||| || | || || Sbjct 432 AATTCGATCACCCTTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACC 491 Query 39957 TATGTTTCCCCTATAATCTTCGTCTATTACACCGCCTCCTATATCAATA---CCTTTTAG 40013 | ||||| ||||||||||| ||||| ||||| |||||| ||||||| |||| Sbjct 492 AACATTTCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCAATAAAGTGTTTTGC 551 Query 40014 GGACAGACCAGACCTAGGAGCTATTCTACCATAGCAGAACTTAGGCATGGACATACTAAT 40073 | || || |||| ||||||| ||| ||||| || ||| | | || ||| Sbjct 552 AGCCAAGCCTGACCGTGGAGCTACTCTTCCATAACACCCAGAAGGGAGCGCTATCTGAAT 611 Query 40074 ATCTGTCTTAATTAACTGTCTTTCTCC--CGGAGGGATAGTATAATCGTAAGCGCTATAC 40131 || || || | || | |||||||| || || || |||||||| || || || ||| Sbjct 612 GTCCGTTTTCA-CAAGAG-CTTTCTCCATAGGTGGTATTGTATAATCATAGGCACTGTAC 669 Query 40132 AAATCATATCCAGCGGC 40148 | || || || ||||| Sbjct 670 AGGTCGTAGCCCGCGGC 686 >seq226669 Length=10677 Score = 91.5 bits (100), Expect = 2e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 39798 TCCAGTTGATCCAAATCCTTGAGCTCCTCTATCTGTACTATCTAGAGATTGTACTTCTTC 39857 |||||| || ||||| || | || || || || ||| | || ||| |||||||| Sbjct 227 TCCAGTGGAACCAAAACCACCTGAACCCCTTTCGGTGTCATCCAAAGCTTGAACTTCTTC 168 Query 39858 CAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCCGTATTTAC 39917 | |||||||||| | || |||| | || || || || |||| ||| ||| | || || Sbjct 167 TATTTCTGGATAAAAAATCCGTTCGCAAATGAGTTGTGCAATTCGATCACCCTTTTTGAC 108 Query 39918 ATTGAAAGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATCTTC 39977 | || | ||| ||| ||||| || | || || | ||||| ||||||||||| Sbjct 107 TTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCCTCTATAATCTTC 48 Query 39978 GTCTATTACACCGCCTCCTATATCAATA 40005 ||||| ||||| |||||| ||||||| Sbjct 47 ATCTATGACACCAGCTCCTACATCAATA 20 >seq73905 Length=5251 Score = 91.5 bits (100), Expect = 2e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 39798 TCCAGTTGATCCAAATCCTTGAGCTCCTCTATCTGTACTATCTAGAGATTGTACTTCTTC 39857 |||||| || ||||| || | || || || || ||| | || ||| |||||||| Sbjct 5025 TCCAGTGGAACCAAAACCACCTGAACCCCTTTCGGTGTCATCCAAAGCTTGAACTTCTTC 5084 Query 39858 CAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCCGTATTTAC 39917 | |||||||||| | || |||| | || || || || |||| ||| ||| | || || Sbjct 5085 TATTTCTGGATAAAAAATCCGTTCGCAAATGAGTTGTGCAATTCGATCACCCTTTTTGAC 5144 Query 39918 ATTGAAAGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATCTTC 39977 | || | ||| ||| ||||| || | || || | ||||| ||||||||||| Sbjct 5145 TTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCCTCTATAATCTTC 5204 Query 39978 GTCTATTACACCGCCTCCTATATCAATA 40005 ||||| ||||| |||||| ||||||| Sbjct 5205 ATCTATGACACCAGCTCCTACATCAATA 5232 >seq244122 Length=408 Score = 87.8 bits (96), Expect = 2e-12 Identities = 174/256 (68%), Gaps = 5/256 (2%) Strand=Plus/Minus Query 41730 CATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTTTTTGGTATTCAC 41786 |||| || | |||| ||| ||| | || ||||| |||||||| | || || || | Sbjct 407 CATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCCTCTGATACTCGC 348 Query 41787 CCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTCCATGAAATCAA 41846 | || | || || || || |||||||||||||||| ||| ||||| ||||| || |||| Sbjct 347 CTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCTCCATAAAGTCAA 288 Query 41847 ACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGA 41906 | || || || | ||| || |||| |||| ||| | || ||| ||||| | Sbjct 287 ATGGGTTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCGGCAT--GTCTGTCTGCCA 230 Query 41907 TGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAG 41966 || || || ||| | ||||| | |||||||| || || || || || || | | Sbjct 229 CAAACTCAATGTATTTCTTCATTAGAGTGCAATTCATCCCAATTAGCTTCACAGGCAAGG 170 Query 41967 CCACAGTAAGAAATTC 41982 || |||| || || || Sbjct 169 CCTCAGTGAGGAACTC 154 >seq9 Length=129882849 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 39798 TCCAGTTGATCCAAATCCTTGAGCTCCTCTATCTGTACTATCTAGAGATTGTACTTCTTC 39857 |||||| || ||||| ||| | || || || || ||| | || ||| |||||||| Sbjct 87873864 TCCAGTGGAACCAAAACCTCCTGAACCCCTTTCGGTGTCATCCAAAGCTTGAACTTCTTC 87873923 Query 39858 CAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCCGTATTTAC 39917 | |||||||||| | || |||| | || ||||| || |||| ||| | | | || || Sbjct 87873924 TATTTCTGGATAAAAAATCCGTTCGCAAATGAGCTGTGCAATTCGATCACACTTTTTGAC 87873983 Query 39918 ATTGAAAGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATCTTC 39977 | || | ||| ||| |||| || | | || | ||||| ||||||||||| Sbjct 87873984 TTCAAACTTTTCTTTGCCAAAGTTAAACAGTACACCACCAACATTTCCTCTATAATCTTC 87874043 Query 39978 GTCTATTACACCGCCTCCTATATCAATA 40005 ||||| ||||| |||||| ||||||| Sbjct 87874044 ATCTATGACACCAGCTCCTACATCAATA 87874071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 668750548473280