Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20mulatta_20[refseq_20GCF_5F000772875.2_202015-11-30] 284,728 sequences; 3,236,224,332 total letters Query= NC_004831.2 Length=43769 Score E Sequences producing significant alignments: (Bits) Value seq149034 95.1 3e-15 seq7 80.6 7e-11 >seq149034 Length=2614 Score = 95.1 bits (104), Expect = 3e-15 Identities = 52/52 (100%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1636 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 1687 >seq7 Length=169600520 Score = 80.6 bits (88), Expect = 7e-11 Identities = 46/47 (98%), Gaps = 0/47 (0%) Strand=Plus/Plus Query 39863 GAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 22336536 GAACGCGTCTACAATTAATACATAACCTTATGTATCATACACATACG 22336582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139466045273616