Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20mulatta_20[refseq_20GCF_5F000772875.2_202015-11-30] 284,728 sequences; 3,236,224,332 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq166179 89.7 6e-13 seq14 89.7 6e-13 >seq166179 Length=1001 Score = 89.7 bits (98), Expect = 6e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 112294 AGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGA 112353 |||||||||| || || || || ||||||||||| |||||||| ||||||| | ||||| Sbjct 711 AGTCTCAAACAGAAACAGGCACCCCATATATGCTCTACAAAGATTCCTGTAATCGAAAGA 652 Query 112354 GTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAAT 112413 | || || |||| |||| ||||| | |||||| || |||||||| |||| | Sbjct 651 GCAACCAGCAGAACCTGGGAACCATCAAATGCAGCAACCTGTGCACAGAAATAGTGGAGT 592 Query 112414 TTACAGACAAAGATGAG 112430 || |||||||||| Sbjct 591 ACACCAGCAAAGATGAG 575 >seq14 Length=127894412 Score = 89.7 bits (98), Expect = 6e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 112294 AGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGA 112353 |||||||||| || || || || ||||||||||| |||||||| ||||||| | ||||| Sbjct 63313936 AGTCTCAAACAGAAACAGGCACCCCATATATGCTCTACAAAGATTCCTGTAATCGAAAGA 63313877 Query 112354 GTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAAT 112413 | || || |||| |||| ||||| | |||||| || |||||||| |||| | Sbjct 63313876 GCAACCAGCAGAACCTGGGAACCATCAAATGCAGCAACCTGTGCACAGAAATAGTGGAGT 63313817 Query 112414 TTACAGACAAAGATGAG 112430 || |||||||||| Sbjct 63313816 ACACCAGCAAAGATGAG 63313800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618533115724160