Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20mulatta_20[refseq_20GCF_5F000772875.2_202015-11-30] 284,728 sequences; 3,236,224,332 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq21 84.2 6e-11 >seq21 Length=149150640 Score = 84.2 bits (92), Expect = 6e-11 Identities = 356/553 (64%), Gaps = 12/553 (2%) Strand=Plus/Minus Query 133076 TTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAGCAAGAT 133135 ||||| || ||||| || || || | || || |||||||||||||| || | ||| | Sbjct 44401441 TTTGTCATCTTCCCCATCGAGTACCATGATATCTGGCAGATGTATAAGAAGGCGGAAGCT 44401382 Query 133136 TTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGAAGCCCTT 133195 | || ||||| | || || || ||||| ||| ||||||||| ||| Sbjct 44401381 TCCTTCTGGACCGCCGAGGAGGTGGACCCGTCCAAGGACATTTGGCACTGGGAATTCCTG 44401322 Query 133196 ACTGGGGATGAAAAACATTTTAT-TTCTATGATTTTAGCGTTTTTTGCTGCGAGTGATGG 133254 | || || | | ||||||| | | ||| || | | || ||||| || |||||||| Sbjct 44401321 AAGCCCGAGGAGAGATATTTTATATCCCATG-TTCTGGTTTTCTTTGC-GCAAGTGATGG 44401264 Query 133255 TATTGTTCTTGAAAATTTAGGAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGCCCG 133314 || || || ||| || | || | || ||||||||| || | |||||||| Sbjct 44401263 CATAGTAAATGCAAACTTGGTGGAGCGATGTAGCCAAGAAGTTCAGGTGACAGAAGCCCG 44401204 Query 133315 TGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCT 133374 || | ||| | || ||||| |||||||| || |||||| | ||| | || Sbjct 44401203 CTGTTTCTGTGGCTTCCAAATTGCCATGGAAAACATACATTCTGGAATGTATAGTTTCCT 44401144 Query 133375 AATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGCCATT--AGC 133432 ||||| |||||||| |||||| || | | | | | ||||| |||||| | | Sbjct 44401143 TATTGACACTTACATAAAAGATCCCAAAGAAAGGGAATTTCGCTTCAATGCCATTGAAAC 44401084 Query 133433 GAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGT 133492 || | |||||| | || ||||| | || ||||| | | ||||| |||||| Sbjct 44401083 GA--TGCCTTGTGTCAAGAAGAAGGCAGATTGGGCCTTGCACTGGATTGGGGACAAAGCA 44401026 Query 133493 GCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGT 133552 || | | || ||| | || | ||||||| || || ||||| |||| |||| Sbjct 44401025 GCTACCTATGGGGAACGTGTTGTAGTCTTTGCTGCAGCGGAAGGCATCTTTT---CTGGT 44400969 Query 133553 GCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTC 133611 || ||| || || || ||||| || || || || | | ||||| || ||||| Sbjct 44400968 -TATTTTGCATCGATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACCTTTTC 44400910 Query 133612 TAACGAACTTATT 133624 || ||||||||| Sbjct 44400909 CAATGAACTTATT 44400897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1466448295329336