Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20mulatta_20[refseq_20GCF_5F000772875.2_202015-11-30] 284,728 sequences; 3,236,224,332 total letters Query= NC_027984.1 Length=57677 Score E Sequences producing significant alignments: (Bits) Value seq149034 1173 0.0 >seq149034 Length=2614 Score = 1173 bits (1300), Expect = 0.0 Identities = 688/703 (98%), Gaps = 9/703 (1%) Strand=Plus/Minus Query 22123 AATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG 22182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1625 AATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG 1566 Query 22183 ACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTG 22242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1565 ACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTG 1506 Query 22243 TCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTG 22302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1505 TCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTG 1446 Query 22303 GCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATA 22362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1445 GCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATA 1386 Query 22363 TTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGC 22422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1385 TTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGC 1326 Query 22423 GAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAAC 22482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1325 GAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAAC 1266 Query 22483 GTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGGTGAACACTATCCCATATCACCAGC 22542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1265 GTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGGTGAACACTATCCCATATCACCAGC 1206 Query 22543 TCACCGTCTTTCATTGCCATACGGAATTCCGGATGAGCATTCATCAGGCGGGCAAGAATG 22602 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| Sbjct 1205 TCACCGTCTTTCATTGCCATACGGAACTCCGGATGAGCATTCATCACGCGGGCAAGAATG 1146 Query 22603 TGAATAAAGGCCGGATAAAACTTGTGCTTATTTTTCTTTACGGTCTTTAAAAAGGCCGTA 22662 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct 1145 TGAATAAAGGCCGGATAAAACTTGTGCTTATTTTTCTTTACGGTCTTT-AAAACGCCGTA 1087 Query 22663 ATATCCAGCTGAACGGTCTGGTTATAGGTACATTGAGCAACTGACTGAAATGCCTCAAAA 22722 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1086 ATATCCAGCTG-ACGGTCTGGTTATAGGTACATTGAGCAACTGACTG-AATGCCTCAAAA 1029 Query 22723 TGTTCTTTACGATGCCATTGGGATATATCAACGGTGGTATATCCAGTGAtttttttCTCC 22782 ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||| Sbjct 1028 TGTTCTTTACGATGCCATTGGGATATATC-ACCGTGGTATATCCAGTGA-TTTTTTCTC- 972 Query 22783 ATTTTAGCTTCCTTAGCTCCTGAAAATCTCGATAACTCaaaaa 22825 |||||||||||||||||||| |||||||||| ||||| ||| Sbjct 971 -ATTTAGCTTCCTTAGCTCCTG-AAATCTCGAT-ACTCATAAA 932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 183821165386704