Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20mulatta_20[refseq_20GCF_5F000772875.2_202015-11-30] 284,728 sequences; 3,236,224,332 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq207700 214 1e-50 seq1 214 1e-50 seq2 183 3e-41 seq1348 152 4e-32 seq99858 127 2e-24 seq4 123 2e-23 seq268873 118 9e-22 seq18 113 4e-20 seq249523 102 7e-17 seq13 93.3 3e-14 seq194578 91.5 1e-13 >seq207700 Length=1268 Score = 214 bits (236), Expect = 1e-50 Identities = 377/547 (69%), Gaps = 7/547 (1%) Strand=Plus/Minus Query 2140 CTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCCA 2199 ||||||||||| | ||||| || | || |||||||| | || || || | ||||| Sbjct 745 CTAAACTGTATCGTCGCTGTGTCCCAGAACATGGGCATCCGCAAGAACGGGGACCTGCCC 686 Query 2200 TGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATG---ACATCTTCTTCCACT 2256 ||||| || || | |||||||| | | |||| || | |||| ||| | ||||| Sbjct 685 TGGCCGCCGCTCAGGAATGAATTCAGATATTTCCAGAGAATGACCACAACCTCTTCAGTA 626 Query 2257 GACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAA 2316 || ||||||||| | || |||||||| | ||||| ||||| || |||| | | | Sbjct 625 GAAGGTAAACAGAATCTGGTGATTATGGGTAAGAAGACTTGGTTCTCCATTCC--TGAGA 568 Query 2317 AGCA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCAC 2374 || | | ||||| || ||||| ||| | |||||||| ||| | || || || || | Sbjct 567 AGAATCGACCTTTAAAGGGTAGAATTAATTTAGTTCTCAGCAGAGAACTCAAGGAACCTC 508 Query 2375 CACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGGAC 2434 ||| || ||||| ||| |||| | |||| | ||| | || | || ||| | || Sbjct 507 CACAAGGAGCTCATTTTCTTGCCAGAAGTCTGGATGATGCCTTAAAACTTACTGAACAAC 448 Query 2435 CAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGG 2494 |||||||| | | | || || | |||||||||| ||||||| || ||||| ||| ||| Sbjct 447 CAGAATTAGCAAATAAAGTAGACATGATTTGGATAGTTGGTGGCAGTTCTGTTTATAAGG 388 Query 2495 AGAGCATTACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTTG 2554 | ||| | | || | | | || ||| | |||||||| ||||| | |||| Sbjct 387 AAGCCATGAATCACCCAGGCCATCTTAAACTATTTGTGACAAGGATCATGCAAGACTTTG 328 Query 2555 AATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTTC 2614 || |||| || | | ||||||||| || | ||||| |||| || | |||| | Sbjct 327 AAAGTGACACCTTTCTTCCAGAAATTGATTTGGAGAAATATAAACTTCTACCAGAATACC 268 Query 2615 CAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATATG 2674 ||||||||| ||||| || ||||| || || || |||| ||||||||||| |||||| Sbjct 267 CAGGTGTTCTCTCTGATGTCCAAGAGGAGAAAGGCATTAAGTACAAATTTGAAGTATATG 208 Query 2675 aaaaaaa 2681 | || || Sbjct 207 AGAAGAA 201 >seq1 Length=225584828 Score = 214 bits (236), Expect = 1e-50 Identities = 379/548 (69%), Gaps = 10/548 (2%) Strand=Plus/Plus Query 2140 CTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCCA 2199 |||||||| || | ||||| || | || |||||||| || || || || | ||||| Sbjct 142398804 CTAAACTGCATCGTCGCTGTGTCCCAGAACATGGGCATCGGCAAGAATGGGGACCTGCCC 142398863 Query 2200 TGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGAC---ATCTTCTTCCACT 2256 ||||| || || | |||||||| | | |||| || | |||||| | | ||||| Sbjct 142398864 TGGCCGCCGCTCAGGAATGAATTCAGATATTTCCAGAGAATGACCACAACCTCTTCAGTA 142398923 Query 2257 GACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAA 2316 || ||||||||| | || |||||||| | ||||| ||||| || |||| | | | Sbjct 142398924 GAAGGTAAACAGAATCTGGTGATTATGGGTAAGAAGACTTGGTTCTCCATTCC--TGAGA 142398981 Query 2317 AGCA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCAC 2374 || | | ||||| || ||||| ||| | || ||||| ||| | || || || || | Sbjct 142398982 AGAATCGACCTTTAAAGGGTAGAATTAATTTAGTACTCAGCAGAGAACTCAAGGAACCTC 142399041 Query 2375 CACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTA-TAATAGGA 2433 ||| || ||||| ||| |||| | |||| | ||| | || | || ||| ||| | | Sbjct 142399042 CACAAGGAGCTCATTTTCTTGCCAGAAGTCTGGATGATGCCTTAAAACTTACTAACA--A 142399099 Query 2434 CCAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAG 2493 ||||||||| | | | || || | |||||||||| ||||||| || ||||| ||| || Sbjct 142399100 CCAGAATTAGCAAATAAAGTAGACATGATTTGGATAGTTGGTGGCAGTTCTGTTTATAAG 142399159 Query 2494 GAGAGCATTACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTT 2553 || ||| | | || | | | || ||| | |||||||| ||||| | ||| Sbjct 142399160 GAAGCCATGAATCACCCAGGCCATCTTAAACTATTTGTGACAAGGATCATGCAAGACTTT 142399219 Query 2554 GAATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTT 2613 ||| |||| || | | ||||||||| || | ||||| |||| || | |||| Sbjct 142399220 GAAAGTGACACCTTTCTTCCAGAAATTGATTTGGAGAAATATAAACTTCTACCAGAATAC 142399279 Query 2614 CCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATAT 2673 |||||||||| ||||| || ||||| || || || |||| ||||||||||| ||||| Sbjct 142399280 CCAGGTGTTCTCTCTGATGTCCAAGAGGAGAAAGGCATTAAGTACAAATTTGAAGTATAT 142399339 Query 2674 Gaaaaaaa 2681 || || || Sbjct 142399340 GAGAAGAA 142399347 >seq2 Length=204787373 Score = 183 bits (202), Expect = 3e-41 Identities = 187/243 (77%), Gaps = 1/243 (0%) Strand=Plus/Plus Query 1270 aaaCGCCACAAGAAGTTGTCATTGTAACATGGCAAAAAGTTAAAGCATCAAGCCCAGAAA 1329 ||| ||| || ||||| | ||||| |||||||| ||| ||||| ||||||||||| Sbjct 33410197 AAATGCC-CAGGAAGTCCTGATTGTGACATGGCAGAAAAAGAAAGCTGTAAGCCCAGAAA 33410255 Query 1330 ACATGGCCACTTTTAGTAATGACCACGGGGTTGTTGTTCAGCCAGCATACAAAGATAAAA 1389 |||||| ||| || || | |||| ||||| || | ||||| || || || || || | Sbjct 33410256 ACATGGTCACCTTCAGCGAGAACCATGGGGTGGTGATCCAGCCTGCCTATAAGGACAAGA 33410315 Query 1390 TGAACATAACTGAGCTTGGACTACAAAACACAACTATAACCTTCTGGAACACAACATTGG 1449 | ||||| || |||| ||||| ||||||||||| || ||||||||||| | || ||| Sbjct 33410316 TAAACATTACCCAGCTGGGACTCCAAAACACAACCATCACCTTCTGGAATATCACCCTGG 33410375 Query 1450 ATGATGAAGGGTGCTACAAGTGTTTATTTAACACTTTTGGATCTGGGAAGATGTCAGGAA 1509 | ||||||||||| |||| |||| | || || || ||||| ||||||||||| ||||||| Sbjct 33410376 AGGATGAAGGGTGTTACATGTGTCTCTTCAATACCTTTGGTTCTGGGAAGATCTCAGGAA 33410435 Query 1510 TAG 1512 || Sbjct 33410436 CAG 33410438 >seq1348 Length=16048 Score = 152 bits (168), Expect = 4e-32 Identities = 370/551 (67%), Gaps = 17/551 (3%) Strand=Plus/Minus Query 2140 CTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCCA 2199 |||||||| || | ||||| || | || ||||||||||| || || || | |||| Sbjct 11904 CTAAACTGCATCGTCGCTGTGTCCCAGAACATGGGCATTGGCAAGAACGGGGACATGCCC 11845 Query 2200 TGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGACATCTTCT-TCCACT-G 2257 ||||| || || | | |||||| | | || || | ||||||| || | |||| | Sbjct 11844 TGGCCGCCACTCAGGAGTGAATTCAGGTAATTCCAGAGAATGACACAAACTCTTCACTAG 11785 Query 2258 ACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAAA 2317 | ||||||||| | || ||| | | || |||| ||||| || |||| | | || Sbjct 11784 AAGGTAAACAGAATCTGGT-GTTACGTGTAGGAAGATCTGGTTCTCCATTCC--TGAGAA 11728 Query 2318 GCA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACC 2375 | | | |||| || | ||||| ||| | |||||||| ||| | || || || || || Sbjct 11727 GAATCGATCTTTAAAGGATAGAATTAATTTAGTTCTCAGCAGAGAACTCAAGGAACCTCC 11668 Query 2376 ACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAA-TTATAATAGGAC 2434 || || ||||| | | |||| | |||| | || | ||| ||| ||| | || Sbjct 11667 ACAAGGAGCTCATTCTCTTGCCAGAAGTCTGGA-CGATATCTTAAAACTTACTGAACAAC 11609 Query 2435 CAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGG 2494 |||||||| | | | || || | |||||||||| ||||||| || ||||| ||| ||| Sbjct 11608 CAGAATTAGCAAATAAAGTAGAGATGATTTGGATAGTTGGTGGCAGTTCTGTTTATAAGG 11549 Query 2495 AGAGCATTACAAGATCTTGCAAA----CAGATGCTGTTTTTAACAAGGATTCTGCAAAAA 2550 | ||| | ||| |||| | | || ||| | |||||||| ||| | Sbjct 11548 AAGCCATGA----ATCACCCAAACCATCTTAAACTATTTGTGACAAGGATCATGCGGGAC 11493 Query 2551 TTTGAATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAA 2610 |||||| |||| || | || ||||||||| || | ||||| |||| || | ||| Sbjct 11492 TTTGAAAGTGACACGTTTTTTCCAGAAATTGATTTGGAAAAATATAAACTTCTGCCAGAA 11433 Query 2611 TTTCCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATA 2670 | |||||||||| ||||| || || || || || | |||| | ||||||||| || Sbjct 11432 TACCCAGGTGTTCTCTCTGATGTCCAGGAGGAGAAAGACATTAAGTTCAAATTTGAAGTA 11373 Query 2671 TATGaaaaaaa 2681 ||||| || || Sbjct 11372 TATGAGAAGAA 11362 >seq99858 Length=11447 Score = 127 bits (140), Expect = 2e-24 Identities = 364/549 (66%), Gaps = 12/549 (2%) Strand=Plus/Minus Query 2140 CTAAACTGTATTGCAGCTGT-CTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCC 2198 |||||||| || | ||||| | | | || ||||||||||| || || || | ||||| Sbjct 4798 CTAAACTGCATCGTCGCTGTGCCCCCAGAACATGGGCATTGGCAAGAATGGGCACCTGCC 4739 Query 2199 ATGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATG--ACATCTTCTTCCACT 2256 ||||| || || | |||||||| | |||| || | || | ||| ||||| Sbjct 4738 CTGGCCGCCACTCAGGAATGAATTCAGGTATTTCCAGAGAAAGACACAGACTCTTCAGTA 4679 Query 2257 GACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAA 2316 || ||||||||| | || ||| | | || |||| |||| || |||| | | | Sbjct 4678 GAAGATAAACAGAATCTCGT-GTTACGTGTAGGAAGATCCGGTTCTCCATTCC--TGAGA 4622 Query 2317 AGCA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAA-AGAGCCA 2373 || | | |||| || | ||||| ||| | ||||||| ||| | || || ||| || Sbjct 4621 AGAATCGATCTTTAAAGGATAGAATTAATTTAATTCTCAGCAGAGAACTCAAGAGA-CCT 4563 Query 2374 CCACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAA-TTATAATAGG 2432 |||| || ||||| ||| |||| | || | | ||| | ||| ||| ||| | Sbjct 4562 CCACAAGGAGCTCATTTTCTTGCCAGAAATCTGGATGA-TATCTTCAAACTTACGGAACA 4504 Query 2433 ACCAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGA 2492 |||||||||| | | || || | |||||||||| ||||||| || | ||| ||| | Sbjct 4503 ACCAGAATTAGCCAATAAAGTAGAGATGATTTGGATAGTTGGTGGCAGTTTTGTTTATAA 4444 Query 2493 GGAGAGCATTACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATT 2552 ||| ||| | | || | | | || ||| | |||||||| || | || Sbjct 4443 GGAAGCCATGAATCACCCAGGCCATCTTAAACTATTTGTGACAAGGATCATGTGGGACTT 4384 Query 2553 TGAATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATT 2612 |||| |||| || | || ||||||||| || | ||||| |||| || | |||| Sbjct 4383 TGAAAGTGACACGTTTTTTCCAGAAATTTATTTGGAAAAATATAAACTTCTGCCAGAATA 4324 Query 2613 TCCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATA 2672 |||||||||| ||||| || || || || || | |||| | ||||||||| |||| Sbjct 4323 CCCAGGTGTTCTCTCTGATGTCCAGGAGGAGAAAGACATTAAGTTCAAATTTGAAGTATA 4264 Query 2673 TGaaaaaaa 2681 ||| || || Sbjct 4263 TGAGAAGAA 4255 >seq4 Length=172585720 Score = 123 bits (136), Expect = 2e-23 Identities = 362/548 (66%), Gaps = 11/548 (2%) Strand=Plus/Minus Query 2140 CTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCCA 2199 |||||||| || | ||||| || | || ||||||||||| || || || | |||| Sbjct 32043311 CTAAACTGCATCGTCGCTGTGTCCCAGAACATGGGCATTGGCAAGAATGGGCACGTGCCC 32043252 Query 2200 TGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATG--ACATCTTCTTCCACTG 2257 ||||| || || | |||||||||| | || || | |||| ||| ||||| | Sbjct 32043251 TGGCCGCCGCTCAGGAATGAATTTAGGTAATTCCAGAGAATGACACAAACTCTTCAGTAG 32043192 Query 2258 ACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAAA 2317 | ||||||||| | || ||| | | || |||| ||||| || |||| | | || Sbjct 32043191 AAGGTAAACAGAATCTGGT-GTTACGTGTAGGAAGATCTGGTTCTCCATTCC--TGAGAA 32043135 Query 2318 GCA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACC 2375 | | | |||| || | ||| | ||| | ||||||| ||| | || || | || || Sbjct 32043134 GAATCGATCTTTAAAGGATAGATTTAATTTAATTCTCAGCAGAGAACTCAAGGGACCTCC 32043075 Query 2376 ACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAA-TTATAATAGGAC 2434 || || ||||| ||| |||| | | || | ||| | ||| ||| ||| | || Sbjct 32043074 ACAAGGAGCTCATTTTCTTGCCAGATGTCTGGATGA-TATCTTAAAACTTACGGAACAAC 32043016 Query 2435 CAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGG 2494 |||||| | | | | || || | ||||||| | ||||||| || ||||| ||| ||| Sbjct 32043015 CAGAATCAGCAAATAAAGTAGAGATTATTTGGACAGTTGGTGGCAGTTCTGTTTATAAGG 32042956 Query 2495 AGAGC-ATTACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTT 2553 | ||| || | | || | | | || ||| | |||||||| || | ||| Sbjct 32042955 A-AGCTATGAATCACCCAGGCCACCTTAAACTATTTGTGACAAGGATCAGGCGGGACTTT 32042897 Query 2554 GAATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTT 2613 ||| |||| || | || ||||||||| || | ||||| |||| || | |||| Sbjct 32042896 GAAAGTGACACGTTTTTTCCAGAAATTGATTTGGAAAAATATAAACTTCTGCCAGAATAC 32042837 Query 2614 CCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATAT 2673 |||||||||| ||||| || || || || || | ||| | ||||||||| ||||| Sbjct 32042836 CCAGGTGTTCTCTCTGATGTCCAGGAGGAGAAAGACGTTAAGTTCAAATTTGAAGTATAT 32042777 Query 2674 Gaaaaaaa 2681 || || || Sbjct 32042776 GAGAAGAA 32042769 >seq268873 Length=42291 Score = 118 bits (130), Expect = 9e-22 Identities = 369/558 (66%), Gaps = 29/558 (5%) Strand=Plus/Plus Query 2140 CTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCCA 2199 |||||||| || | ||||| | | || ||||||||||| || || || | ||||| Sbjct 4664 CTAAACTGCATCGTCGCTGTGCCCCAGAACATGGGCATTGGCAAGAACGGGCACCTGCCC 4723 Query 2200 TGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGACATCTTCT-TCCACT-G 2257 ||| | || || | |||||||||| |||| || | ||||||| || | |||| | Sbjct 4724 TGGTCGCCACTCAGGAATGAATTTAGGTATTTCCAGAGAATGACACAAACTCTTCACTAG 4783 Query 2258 ACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAAA 2317 | ||||||||| | || ||||| | || |||| |||| || |||| | | || Sbjct 4784 AAGGTAAACAGAATCTGGT-GTTATGTGTAGGAAGATCCGGTTCTCCATTCC--TGAGAA 4840 Query 2318 GCA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAA-AGAGCCAC 2374 | | | ||||| || | ||||| ||| | ||||||| ||| | || || ||| || | Sbjct 4841 GAATCGACCTTTAAAGGATAGAATTAATTTAATTCTCAGCAGAGAACTCAAGAGA-CCTC 4899 Query 2375 CACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAA-TTATAATAGGA 2433 ||| || | ||| | | |||| | |||| | ||| | ||| ||| ||| | | Sbjct 4900 CACAAGGAGATCATTCTCTTGCCAGAAGTCTGGATGA-TATCTTAAAACTTACTGAACAA 4958 Query 2434 CCAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAG 2493 ||||||||| | | | || || | |||||||||| ||||| | || | ||| ||| || Sbjct 4959 CCAGAATTAGCAAATAAAGTAGAGATGATTTGGATAGTTGGTAGCAGTTTTGTTTATAAG 5018 Query 2494 GA----GAGCATTAC----AAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGC 2545 || | | || || | ||||| ||| || ||| | |||||||| ||| Sbjct 5019 GAAGCCGTGAATCACCCAAACCATCTT--AAA------CTATTTGTGACAAGGATCATGC 5070 Query 2546 AAAAATTTGAATGTGATAC--ATACTTCCCAGAAATTAATCTTACCAAATACAAACAACT 2603 | |||||| ||| || | || ||||||||| || | ||| | |||| || Sbjct 5071 GGGACTTTGAAAATGACACTTTTTTTTTCCAGAAATTGATTTGGAGAAACATAAACTTCT 5130 Query 2604 TACTGAATTTCCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATT 2663 | |||| |||||||||| ||||| || || || || || |||| | |||||| Sbjct 5131 GCCAGAATACCCAGGTGTTCTCTCTGATGTCCAGGAGGAGAAACACATTAAGTTCAAATT 5190 Query 2664 TGAGATATATGaaaaaaa 2681 || ||||||| || || Sbjct 5191 CGAAGTATATGAGAAGAA 5208 >seq18 Length=70235451 Score = 113 bits (124), Expect = 4e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304 || || || ||||||||| | || ||||| ||||||||| | || || || ||||||||| Sbjct 52892723 GTGGTGGAGGAGCTCTTCAGGGACGGGGTGAACTGGGGGAGGATCGTGGCCTTCTTTGAG 52892664 Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364 || ||||| || ||||||||||| |||||||| | | || | |||| || |||||| Sbjct 52892663 TTCGGTGGGGTCATGTGTGTGGAGAGCGTCAACCGGGAGATGTCGCCCCTGGTGGACAAC 52892604 Query 3365 ATTGCCGCGTGGATGACAGA 3384 || ||| ||||||||| || Sbjct 52892603 ATCGCCCTGTGGATGACTGA 52892584 Score = 102 bits (112), Expect = 7e-17 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 || || || | ||| ||||||||||| || | || ||||||||| | || ||||| Sbjct 8839046 AGGCCCGTGATGTGCGCAATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGC 8839105 Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653 ||||| || ||||||||| | ||||||||||||| ||||| || ||||| | ||| | Sbjct 8839106 ACACCTAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACC 8839165 Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694 ||||| ||||| | | || ||||||||||| |||| Sbjct 8839166 ACATAGAACTGGCAGAGAGCATGGCATGGAGGCAGTGCCAT 8839206 >seq249523 Length=30393 Score = 102 bits (112), Expect = 7e-17 Identities = 172/249 (69%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 2433 ACCAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGA 2492 |||||||||| | | | || || | |||||||||| ||||||| || | | | || | Sbjct 5703 ACCAGAATTAGCAAATAAAGTAGAGATGATTTGGATAGTTGGTGGCAGTTATATTCATAA 5644 Query 2493 GGAGAGCATTACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATT 2552 ||| | ||||| | || | | | || ||| | |||||||| |||| | || Sbjct 5643 GGAAACCATTAATCACCCAGGCCATCTTAAACTATTTGTGACAAGGATCATGCAGGACTT 5584 Query 2553 TGAATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATT 2612 |||| |||| || || || ||||||||| || | ||||| |||| || | |||| Sbjct 5583 TGAAAGTGACACGTATTTTCCAGAAATTGATTTGGAGAAATATAAACTTCTGCCAGAATA 5524 Query 2613 TCCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATA 2672 |||||| ||| ||| | || || || || || || |||| ||||||||||| |||| Sbjct 5523 CCCAGGTTTTCTCTCGGATGTCCAGGAGGAGAAAGGCATTAACTACAAATTTGAAGTATA 5464 Query 2673 TGaaaaaaa 2681 ||| || || Sbjct 5463 TGAGAAGAA 5455 >seq13 Length=108979918 Score = 93.3 bits (102), Expect = 3e-14 Identities = 375/590 (64%), Gaps = 57/590 (10%) Strand=Plus/Plus Query 2140 CTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACA-AGGGAAAACTGCC 2198 |||||||| || | ||||| || | || || ||| | | || | ||||| ||||| Sbjct 84514004 CTAAACTGCATGGTCGCTGTGTCCCAGAACATTGGCGTCAGCAAAACAGGGAC--CTGCC 84514061 Query 2199 ATGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGAC---ATCTTCTTCCAC 2255 ||||| || || | ||||| || | |||| || | |||||| | | ||||| | Sbjct 84514062 CTGGCCGCCGCTCAGGAATGAGTTCAGGTATTTCCAGAGAATGACCACAACCTCTTCAGC 84514121 Query 2256 TGACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCC-ATTA 2314 || ||||||||| | || |||||||| || |||| ||||| || ||||| | | Sbjct 84514122 AGAAGGTAAACAGAATCTGGTGATTATGGGTAGGAAGATCTGGTTCTCCCTTCCTGAGAA 84514181 Query 2315 AAAGCAGGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCAC 2374 ||| || ||||| || |||||||| ||| | |||||| ||||| |||| || || || | Sbjct 84514182 AAATCAC-CCTTTAAAGAACAGAATTAATTTAGTTCTCGGTAGAGACCTCAA-GAACCTC 84514239 Query 2375 CACGTGGGGCTCACTTTGTT---------------------------------------- 2394 || || ||| ||| || Sbjct 84514240 CAGAAGGAACTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 84514299 Query 2395 --GCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGGACCAGAATTAAAAGACAGGG 2452 || | |||| | ||| | || || |||| | ||||| |||||||||| | | | Sbjct 84514300 TTGCCAGAAGTCTGGATGATGC-CTTGAAACT-TAATA--ACCAGAATTAGCAAATGAAG 84514355 Query 2453 TGGATAAGATTTGGATAATTGGTGGAAGATCTGTCT-ATGAGGAGAGCATTACAAGATCT 2511 | || | ||||||||| ||||||| | ||||| | || |||| ||| | | Sbjct 84514356 TAGACATGATTTGGATGGTTGGTGGTGGTTCTGTTTTATAAGGAATCCATGAATCACCCA 84514415 Query 2512 TGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTTGAATGTGATACATACTTC 2571 |||| | | |||||| | |||| ||| | || | |||||| |||| |||| ||| Sbjct 84514416 AGCAATCTTAAACTGTTTGTGACAAAGATCATTCAGGACTTTGAAAGTGACACATTTTTC 84514475 Query 2572 CCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTTCCAGGTGTTCCCTCTGCC 2631 | ||||||| || | ||||| |||| || | |||| | ||||||| ||||| Sbjct 84514476 C-AGAAATTGATTTGGAGAAATATAAACTTCTGCCAGAATACCGAGGTGTTTTCTCTGAT 84514534 Query 2632 GTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATATGaaaaaaa 2681 || || || || || || |||| ||||||||||| || |||| || || Sbjct 84514535 GTCCAGGAGGAGAAAGGCATTAAGTACAAATTTGAAGTACATGAGAAGAA 84514584 >seq194578 Length=12589 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 2452 GTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGGAGAGCATTACAAGATCT 2511 || || | ||||||| || ||||||| || ||||| ||| |||| ||| | | Sbjct 6472 GTAGAGATGATTTGGTTAGTTGGTGGCAGTTCTGTTTATAAGGAAGCCATGAATCACCCA 6531 Query 2512 TGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTTGAATGTGATACATACTTC 2571 || | | | || ||| | |||||||| ||| | |||||| |||| || || || Sbjct 6532 GGCCACCTTAAACTATTTGTGACAAGGATCAGGCAGGACTTTGAAAGTGACACGTATTTT 6591 Query 2572 CCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTTCCAGGTGTTCCCTCTGCC 2631 ||||||||| || | ||||| |||| || | |||| |||||| ||| ||| | Sbjct 6592 CCAGAAATTGATTTGGAGAAATATAAACTTCTGCCAGAATACCCAGGTTTTCTCTCGGAT 6651 Query 2632 GTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATATGaaaaaaa 2681 || || || || || || |||| ||||||||||| ||||||| || || Sbjct 6652 GTCCAGGAGGAGAAAGGCATTAACTACAAATTTGAAGTATATGAGAAGAA 6701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 413038514730592