Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20mulatta_20[refseq_20GCF_5F000772875.2_202015-11-30] 284,728 sequences; 3,236,224,332 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq153555 919 0.0 >seq153555 Length=968 Score = 919 bits (1018), Expect = 0.0 Identities = 569/609 (93%), Gaps = 0/609 (0%) Strand=Plus/Minus Query 58491 AGAATTCGGAAAAAATCGTACGCTAAGGTTTTCCGGGCATCCGTAAGGGCCGAAACTTCC 58550 |||| ||||||||||||||||||| ||||||||||||| || || ||||||||||||| Sbjct 609 AGAAAACGGAAAAAATCGTACGCTAGGGTTTTCCGGGCAGCCTTAGCGGCCGAAACTTCC 550 Query 58551 CGTCTTCCAGTCTGCGGCTCTGCCGCCAGACGTAATCGCCGGTTAGGTTGATGTGCTCCC 58610 |||| ||||| ||||||||||||||||||||||||| |||||| ||||||||||| |||| Sbjct 549 CGTCCTCCAGCCTGCGGCTCTGCCGCCAGACGTAATTGCCGGTCAGGTTGATGTGTTCCC 490 Query 58611 AGCCCAGCGGCGACAGGAATTGCAGCAGCTCGCCGTCCACCGGCTTGCCGGCCTCGACCA 58670 ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct 489 AGCCCAGCGGCGACAGGTATTGCAGCAGCTCGCCGTCCACCGGTTTGCCGGCCTCGACCA 430 Query 58671 ACCCCTGGGTGGCGCGTTCCAGGTACACCGTGTTCCACAGCACGATAGCCGCCGTCACCA 58730 |||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||| Sbjct 429 ACCCCTGGGTGGCGCGCTCCAGGTACACCGTGTTCCACAGCACGATGGCGGCCGTCACCA 370 Query 58731 GGTTGAGGCCGCTGGCCCGGTAGCGCTGCTGCTCGAAGCTCCGATCCCTGATTTCCCCAA 58790 ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct 369 GGTTGAGACCGCTGGCCCGGTAGCGCTGTTGCTCGAAACTCCGATCCCTGATTTCCCCAA 310 Query 58791 GGCGGTTGAAGAACACCGCCCTGGCCAGCGAGTTGCGCGCCTCACCTTTGTTCAGGCCGG 58850 |||||||||||||||||||||||||||| |||||||| || ||||| |||||||| |||| Sbjct 309 GGCGGTTGAAGAACACCGCCCTGGCCAGGGAGTTGCGTGCTTCACCCTTGTTCAGACCGG 250 Query 58851 CATGCACGCGGCGGCGCAGTTCAACACTTTGCAGCCAGTCCAGGATGAACAGCGTGCGCT 58910 |||||||||||||||||||||| || || |||| |||||| ||||||||||||||||||| Sbjct 249 CATGCACGCGGCGGCGCAGTTCGACGCTCTGCAACCAGTCGAGGATGAACAGCGTGCGCT 190 Query 58911 CGATCCGGCCCAGCTCGCGCAGGGCCACGGCCAGTCCGTTCTGGCGCGGGTAGCTGCCGA 58970 |||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||| Sbjct 189 CGATCCGGCCCAGCTCGCGCAGGGCCACGGCCAGGCCGTTCTGGCGTGGATAGCTGCCGA 130 Query 58971 GCTTGCGCAGCATCAGCGAGGCGGTGACGGTGCCCTGCTTGATCGAGCTGGCCAGGCGCA 59030 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 129 GCTTGCGCAGCATCAGCGAGGCGGTGACGGTGCCCTGCTTGATCGAGCTGGCCTAGCGCA 70 Query 59031 GGATGTCGTCCCAGTGGGCACGCACGTGCTTGATGTTCAGGGTGCCGCCGATCAGCGGGC 59090 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct 69 GGATGTCATCCCAGTGGGCGCGGACGTGCTTAATGTTCAGGGTGCCGCCGATCAGCGGGC 10 Query 59091 GCAACGTCG 59099 ||| ||||| Sbjct 9 GCAGCGTCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 329750939240848