Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20nemestrina_20[refseq_20GCF_5F000956065.1_202015-03-19] 9,733 sequences; 2,948,703,511 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq37 242 4e-59 seq7002 172 6e-38 seq758 147 2e-30 seq7446 145 8e-30 seq5557 138 1e-27 seq3 123 3e-23 seq2225 111 2e-19 seq1299 109 6e-19 seq7292 105 7e-18 seq1226 104 2e-17 seq858 104 2e-17 seq547 104 2e-17 seq1470 102 8e-17 seq892 96.9 4e-15 seq337 96.9 4e-15 seq1002 95.1 1e-14 >seq37 Length=10148950 Score = 242 bits (268), Expect = 4e-59 Identities = 442/640 (69%), Gaps = 8/640 (1%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||||| | || |||||| |||| || || || |||||||| | |||| || Sbjct 6163939 GAGCCGCTGCTGAGAGAAAACCCCTGCCGTTTTGTCATCTTCCCCATCGAGTACCATGAT 6163880 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| ||||| || ||||| || || || |||||||||| |||||||||||||| | Sbjct 6163879 ATCTGGCAGATGTATAAGAAGGCGGAAGCTTCCTTCTGGACCGCCGAGGAGGTGGACCCG 6163820 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755 |||||||||| | ||||||| | |||| | | ||| | |||| || || Sbjct 6163819 TCCAAGGACATTTGGCACTGGGAATTCCTGAAGCCCGAGGAGAGATATTTTATATCCCAT 6163760 Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG-TTT 116814 || |||| || || | ||| || || ||||| || || | || |||| ||||| | | Sbjct 6163759 GTTCTGGTTTTCTTTG-CGCAAGTGATGGCATAGTAAATGCAAACTTGGTGGAGCGATGT 6163701 Query 116815 CGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874 || || || || |||||| | || || || || |||| ||||| || || |||||||| Sbjct 6163700 AGC-CAAGAAGTTCAGGTGACAGAAGCCCGCTGTTTCTGTGGCTTCCAAATTGCCATGGA 6163642 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGA 116934 ||| | || || | ||||||| ||| || ||||| ||| | | | | || Sbjct 6163641 AAACATACATTCTGGAATGTATAGTTTCCTTATTGACACTTACATAAAAGATCCCAAAGA 6163582 Query 116935 GAAGCTCCGTTTG-TTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGT 116993 ||| || | || || ||||| || |||||||| || ||||| ||||||| || | Sbjct 6163581 -AAGGGAATTTCGCTTCAATGCCATTGAAACGATGCCTTGTGTCAAGAAGAAGGCAGATT 6163523 Query 116994 GGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCG 117053 |||| ||| |||||| | | || || || ||| || || || | || | ||| | Sbjct 6163522 GGGCCTTGCACTGGATTGGGGACAAAGCAGCTACCTATGGGGAACGTGTTGTAGTCTTTG 6163463 Query 117054 CGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAAC 117113 | || | || || | ||||||| || ||| || | ||||| ||||||||||||| Sbjct 6163462 CTGCAGCGGAAGG---CATCTTTTCTGGTTATTTTGCATCGATATTCTGGCTCAAGAAAC 6163406 Query 117114 GCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGC 117173 | || || ||||| ||||| || || ||| || || || | || |||||| | | Sbjct 6163405 GAGGACTGATGCCTGGCCTCACCTTTTCCAATGAACTTATTAGTGGAGATGAGGGTTTAC 6163346 Query 117174 ATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCA 117213 | || || ||||| || || ||||||| || |||| || Sbjct 6163345 ACTGTGATTTTGCTTGCCTGATGTTCAATCACCTGGTACA 6163306 >seq7002 Length=12659153 Score = 172 bits (190), Expect = 6e-38 Identities = 178/232 (77%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| ||||| || || || || || ||||||||||||||||||||| || | ||||| | Sbjct 9467270 AAACATGCAGATCTTTGTGAAGACCCTCACGGGCAAAACCATCACCCTCAAGGTCGAGCC 9467211 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 || |||| | || || | |||| | ||||||| ||||| ||||| ||||| | || Sbjct 9467210 CAGTGACACCATGAGAATG-TCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGA 9467152 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || || || | || |||||||||||||| || | ||||| ||| ||||| Sbjct 9467151 CCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAAGATGGCCGCACTCTCTCAGACTA 9467092 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| ||| |||| ||||| || ||||||||| || | || ||| Sbjct 9467091 CAACATCCAGAAAGAGTCCACCCTGCACCTGGTGTTGCGCCTGCGAGGTGGC 9467040 >seq758 Length=2790677 Score = 147 bits (162), Expect = 2e-30 Identities = 170/228 (75%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || || ||||| ||||||||| | || || || ||| Sbjct 2565445 ATGCAGATCTTCGTGAAAACCCTGACCGGCAAGACCATCACCCTGGA-GTGGAGCCCAGT 2565503 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| | |||| || || | || ||||| ||||||||| | |||||| Sbjct 2565504 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCCGACCAG 2565563 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||||| || ||||| |||||||| || | ||||| || ||||||||| Sbjct 2565564 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAAC 2565623 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| | || ||||| || || ||||| ||||||| ||| Sbjct 2565624 ATCCAGAAGGAGTCAACCCTGCACCTGGTCCTGCGCCTGAGGGGTGGC 2565671 Score = 122 bits (134), Expect = 9e-23 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||||| || || || || ||||| ||||||||| | || || || || Sbjct 2564985 AAAATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTTGAGGTGGAGCCC 2565044 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | ||| | |||| ||||| | || || || ||||| ||| | ||| Sbjct 2565045 AGTGACACCATCGAAAATGTGAAGGCCAAAATCCAGGATAAGGAAGGCATTCCCCCCGAC 2565104 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | ||||||| || ||||| |||||||| || | ||||| || |||||| Sbjct 2565105 CAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTAC 2565164 Query 40867 AACATCCAGAAGGAGGCCACGCTGC 40891 ||||||||||| ||| | || |||| Sbjct 2565165 AACATCCAGAAAGAGTCGACCCTGC 2565189 Score = 100 bits (110), Expect = 3e-16 Identities = 159/222 (72%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 40691 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCG 40750 |||| || ||||| || || || || ||||| ||||||||| | || | | ||| | Sbjct 2565219 TGCAGATCTTCGTGAAGAC-CTGACCGGCAAGACCATCACCCTTGAGGGTGC--CCAGTG 2565275 Query 40751 ACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCAT-CCCCGCGGACCAG 40809 ||| | | ||| | |||| ||||| | || || || ||||| |||| | |||||| Sbjct 2565276 ACACCATCGAAAATGTGAAGGCCAAAATCCAGGATAAGGAAGGCATTCCCCCCCGACCAG 2565335 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||||| || ||||| |||||||| || | ||||| || ||||||||| Sbjct 2565336 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAAC 2565395 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCT-AGTGTTGCGCTTGAG 40910 |||||||| ||| | || ||||| || || ||||| |||| Sbjct 2565396 ATCCAGAA-GAGTCGACCCTGCACCTGGGTCCTGCGCCTGAG 2565436 >seq7446 Length=17224310 Score = 145 bits (160), Expect = 8e-30 Identities = 174/233 (75%), Gaps = 5/233 (2%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| ||||| || || || || || ||| ||||||||||||||||| | || ||||| | Sbjct 13347114 AAACATGCAGATCTTTGTGAAGACCCTCCCGGGCAAAACCATCACCCTTGAGGTCGAGCC 13347055 Query 40746 CACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 || |||| | | | |||| |||| | ||||||| ||||| ||||| ||||| | | Sbjct 13347054 CAGTGACACCATTGAGAACG-TCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTG 13346996 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 ||||||| || || || | || ||||||||||||| || | ||||| ||| |||| Sbjct 13346995 ACCAGCAGCGTCTGATATTTGCCAGCAAACAGCTGGAAGATGGCCGCACTCTCTCAGACT 13346936 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||| | ||| |||| ||||| || ||||||||| || | || ||| Sbjct 13346935 ACAACATCC---AAGAGTCCACCCTGCACCTGGTGTTGCGCCTGCGAGGTGGC 13346886 >seq5557 Length=63123227 Score = 138 bits (152), Expect = 1e-27 Identities = 161/215 (75%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| ||||| ||||||||| |||| ||||| ||| Sbjct 51838392 ATGCAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 51838333 Query 40750 GACAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || || | |||||| ||||||| | ||| ||||||||||| ||||| Sbjct 51838332 GACACCACTGAGAATG-TCAAGGCCAAAATTCAAGCCAAGGAGGGCATCCCACTTGACCA 51838274 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||||||||||||||||| || | ||||| ||| |||| ||| Sbjct 51838273 GCAGCGTCTGATATTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTGCAA 51838214 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGC 40903 ||||||||| ||| ||| ||||| || | | ||| Sbjct 51838213 CATCCAGAAAGAGTCCATCCTGCACCTGGGGCTGC 51838179 >seq3 Length=16319837 Score = 123 bits (136), Expect = 3e-23 Identities = 152/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || || || ||||| ||||||||| | || || || ||| Sbjct 4626191 AATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAG 4626250 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | |||||| ||| || | || || || ||||| || | ||||| Sbjct 4626251 TGACACCATTGAGAATGTCAAGGCAAAGATCCAAGATAAGGAAGGCATTCCTCCCGACCA 4626310 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || || |||||||| || | ||||||||| |||||||| Sbjct 4626311 GCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 4626370 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTA 40896 ||||||||| ||| |||| ||||| ||| Sbjct 4626371 CATCCAGAAAGAGTCCACCCTGCACCTA 4626398 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || |||| |||||| ||||||||| | || || || ||| Sbjct 14926399 ATGCAGATCTTTGTGAACACCCTCATGGGCAAGACCATCACCCTTGAGGTGGAGCCCAGG 14926458 Query 40750 GACAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || || | |||| | |||| | ||||| ||||||||| | ||||| Sbjct 14926459 GACACCACTGAGAATG-TCAAAGCCGAAATCCAAGACAAGTAGGGCATCCTGCCTGACCA 14926517 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || || | ||||||||||||| ||| || | |||| ||| ||||| || Sbjct 14926518 GCAGTGTCTGATATTTGCGGGCAAACAGCCGGAGGATGGCCGCAGTCTCTCAGACTAGAA 14926577 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||| ||| |||| ||||| || ||| ||||| || | || ||| Sbjct 14926578 CATCCAGAAAGAGTCCACCCTGCACCTGGTGCTGCGCCTGTGAGGTGGC 14926626 Score = 111 bits (122), Expect = 2e-19 Identities = 115/151 (76%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 40766 TCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACG 40825 |||||| ||| || | ||||| || |||||||| | |||||||| | | |||| | Sbjct 4628477 TCAAGGCAAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCAGCAGAGGTTGATCTTTG 4628536 Query 40826 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCA 40885 | || ||||||||||| || | |||||||| ||||||||||||||||| ||| ||| Sbjct 4628537 CTGGGAAACAGCTGGAAGATGGACGCACCCTGTCTGACTACAACATCCAGAAAGAGTCCA 4628596 Query 40886 CGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 | ||||| | || ||||||||||||| || Sbjct 4628597 CTCTGCACTTGGTCCTGCGCTTGAGGGGGGG 4628627 >seq2225 Length=31540782 Score = 111 bits (122), Expect = 2e-19 Identities = 167/230 (73%), Gaps = 7/230 (3%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC-AC 40748 ||||| || ||||| ||| | || |||| ||| ||||||||| | || | | |||| | Sbjct 23425189 ATGCAGATCTTCGTGAAACC-CTGACGG-CAAGACCATCACCCTGGAAGGTGGAGCCCAG 23425246 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAG-AGGGCATCCCCGCGGACC 40807 |||| | | ||| | |||| || || | || |||| | ||||||||| | ||| Sbjct 23425247 TGACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAAGGAAGGCATCCCCCCCAACC 23425306 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| | ||||||| || ||||| |||||||| | | ||||| || ||||||| Sbjct 23425307 AGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGA--ATGGCCGCACTCTTTCTGACTACA 23425364 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||||| | || ||||| || || ||||| ||||||| ||| Sbjct 23425365 ACATCCAGAAGGAGTCAACCCTGCA-CTGGTCCTGCGCCTGAGGGGTGGC 23425413 Score = 104 bits (114), Expect = 2e-17 Identities = 165/228 (72%), Gaps = 8/228 (4%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAA-ACCATCACCGTCGACGTCGAAGCCAC 40748 ||||| || ||||| || || || || ||||| ||||||||| | || || || |||| Sbjct 23424967 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGCACCATCACCCTGGAAGTGGA-GCCAG 23425025 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | ||| | | |||| || || | || || || ||||||| || |||| Sbjct 23425026 TGACACCATCGAAATG-TGAAGGCCAAGATCCAGGATAAGAAG--CATCCCCCCG-ACCA 23425081 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | ||||||| || ||||| |||||||| || | ||||| || || ||||| Sbjct 23425082 GCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGA-TACAA 23425140 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| | || ||||| || || ||||| |||| || || Sbjct 23425141 CATCCAGAAGGAGTCGAC-CTGCACCTGGTCCTGCGCCTGAGAGGTGG 23425187 >seq1299 Length=15376 Score = 109 bits (120), Expect = 6e-19 Identities = 157/220 (71%), Gaps = 1/220 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||||||||| ||||||||| | || | || ||| Sbjct 1725 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGATTGAGCCCAGT 1784 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGC-ATCCCCGCGGACCA 40808 |||| | | | | |||| | ||||||| ||||| ||||| ||||| | ||||| Sbjct 1785 GACACCATTTAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGATATCCCACCTGACCA 1844 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || || || ||||||||||| || | ||||| ||| | |||||| Sbjct 1845 GCAGCGTCTGATACTTGCTGGGAAACAGCTGGAGGATGGCCGCACTCTCTCAGGCTACAA 1904 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTG 40908 ||||||||| ||| |||| || | || ||| || || || Sbjct 1905 CATCCAGAAAGAGTCCACCCTAAACCTGGTGCTGTGCCTG 1944 >seq7292 Length=2378 Score = 105 bits (116), Expect = 7e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 40766 TCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACG 40825 |||| | ||||||| ||||| ||||||||||| | |||||||| | || || | Sbjct 896 TCAACGCCAAAATTCAAGACAAGGAGGGCATCCCACCTGACCAGCAGCATCTGATACTTG 955 Query 40826 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCA 40885 |||||||||||||||| || | |||| ||| ||||||||||||||||| ||| ||| Sbjct 956 CGGGCAAACAGCTGGAGGATGGCTGCACTCTCTCAGACTACAACATCCAGAAAGAGTCCA 1015 Query 40886 CGCTGCATCTAGTGTTGCGCTTG 40908 | ||||| | ||| ||||| || Sbjct 1016 CTCTGCACATGGTGCTGCGCCTG 1038 >seq1226 Length=1830524 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || | ||||| || ||||| || | |||||||||| | || ||| | ||| Sbjct 1001238 ATGCAGATCTCTGTAAAGACCCTCACAGGAAGAACCATCACCTTTGAGGTCCAGCCCAGT 1001297 Query 40750 GACAGC-GTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | ||| ||| | |||| | || || | ||||| ||||||||||| | ||||| Sbjct 1001298 GACACCAGTGAAAATG-TCAAAGCCAAGATCCATGACAAGGAGGGCATCCCACCTGACCA 1001356 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || || | | |||||||||| |||| || | | ||| || || || || Sbjct 1001357 GCAGCATCTGATATTTGTGGGCAAACAGTTGGAGGATGGCCACACTCTTTCAGATTATAA 1001416 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||| ||| |||| ||||| Sbjct 1001417 CATCCAGAAAGAGTCCACCCTGCA 1001440 >seq858 Length=7346751 Score = 104 bits (114), Expect = 2e-17 Identities = 161/225 (72%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 40696 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGC 40755 || || || || || ||||| ||||| |||||| || | || ||||| | | |||| | Sbjct 3074267 ATCTTTGTGAAGACCCTCACAGGCAAGACCATCGCCCTTGAGGTCGAGCCGAGTGACACC 3074208 Query 40756 G-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACG 40814 || || || ||| | ||||||| ||||| ||||||||| | |||||||| | Sbjct 3074207 ACTGAGAATGC-CAAAGCCAAAATTCAAGACAAGTAGGGCATCCTACCTGACCAGCAGTG 3074149 Query 40815 ACTCATC-TACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCC 40873 || || | | ||||||| ||||||| || | ||||| ||| ||||||||||||| Sbjct 3074148 TCTGATAATTTGAGGGCAAATAGCTGGAGGATGGCCGCACTCTCTCAGACTACAACATCC 3074089 Query 40874 AG-AAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 || || ||| |||| ||||| || || ||||| || | || ||| Sbjct 3074088 AGAAAAGAGTCCACCCTGCACCTGATGCTGCGCCTGCGAGGTGGC 3074044 >seq547 Length=9034655 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || |||||||| |||||||| | || ||| | ||| Sbjct 8022648 ATGCAGATCTTTGTGAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCAAGCCCAGT 8022707 Query 40750 GACAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || | | |||| | ||||||| ||||| ||||| ||||| | ||||| Sbjct 8022708 GACACCAATGAGGATG-TCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCA 8022766 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || || || |||||||||||||| || | || || ||| |||||| | Sbjct 8022767 GCAGCATCTGATACTTGCCGGCAAACAGCTGGAGGATGGCCGAACTCTCTCAGACTACGA 8022826 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||| | | ||| |||| ||||| || ||| ||||| || | || ||| Sbjct 8022827 CATCTGGGAAGAGTCCACCCTGCACCTGGTGCTGCGCCTGCGAGGTGGC 8022875 >seq1470 Length=5179915 Score = 102 bits (112), Expect = 8e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 40708 ACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTC 40767 || ||||||||||| ||||||| | | || ||||| ||| ||| | | | || Sbjct 4406793 ACCCTCACGGGCAAGACCATCATCCTTGAGGTCGAGCCCAGTTACACCACTGAGAATTTC 4406734 Query 40768 AAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCG 40827 || | ||||||| ||||||||||| ||||| | |||||||| || || || | || Sbjct 4406733 AAAGCCAAAATTCAAGACAAAGAGGGTATCCCACCTGACCAGCAGCGTCTGATATTTGCT 4406674 Query 40828 GGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACG 40887 ||||| |||||||| || | |||| ||| |||||||||||||| || || |||| Sbjct 4406673 GGCAAGCAGCTGGAGGATGGCTGCACTCTCTCAGACTACAACATCCAAAAACAGTCCACC 4406614 Query 40888 CTGCATCTAGT 40898 |||| || || Sbjct 4406613 ATGCACCTGGT 4406603 >seq892 Length=8016392 Score = 96.9 bits (106), Expect = 4e-15 Identities = 148/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| ||| | ||||| || | ||||| |||||| || | || || || || Sbjct 5021419 AAAATGCAAATCTTCCTGAAAACCCTGCCCGGCAAGACCATCTCCCTGGAGGTGGAGCCC 5021478 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCAT-CCCCGCGGA 40805 | |||| | | |||| | |||| || || | || ||||| ||||| |||| | || Sbjct 5021479 AGTGACATCCTCCAAAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCACTGA 5021538 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| | ||||||| | ||||| | ||| || || | |||| || ||||| Sbjct 5021539 CCAGCAGAGTCTCATCTTTGTAGGCAAGCGGCTAGAAGATGGCTGCACTCTTTCTGACTA 5021598 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCT 40895 |||||| ||||| ||| | | ||||| || Sbjct 5021599 CAACATTCAGAAAGAGTCAGCCCTGCACCT 5021628 >seq337 Length=12475526 Score = 96.9 bits (106), Expect = 4e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 || ||||||||| | || ||||||||||| || || || |||||||| | |||| || Sbjct 7493812 GAACCGCTGCTGAGAGAAAACCCCCGCCGCTTTGTCATCTTCCCCATCGAGTACCATGAT 7493753 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGT 116688 || |||| ||||| || ||||| ||||| || |||||||| | ||||||||| Sbjct 7493752 ATCTGGCAGATGTATAAGAAGGCGGAGGCTTCCTTCTGGACTGCCGAGGAGGT 7493700 >seq1002 Length=29577158 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| | ||||| || || || || | ||| ||||||||| | || || || || Sbjct 10709166 AAAATGCAGGTCTTCGTGAAGACCCTGACTGACAAGACCATCACCCTTGATGTGGAGCCC 10709225 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | ||| | |||| || || | || || || |||||| | | ||| Sbjct 10709226 AGTGACACCATCTAAAATGTGAAGGCCAATATCCAGGATAAGGAAGGCATCTGCCCCGAC 10709285 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 | ||| | ||||||| || |||| |||||||| || | ||||| || |||||| Sbjct 10709286 CCGCAGAGGCTCATCTTTGCAGGCATGCAGCTGGAAGATGGCCGCACTCTTTCTGACTAC 10709345 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||| || | || ||||| || || Sbjct 10709346 AACATCCAGAAAGAATCGACCCTGCACCTGGT 10709377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515156517144080