Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macaca_20nemestrina_20[refseq_20GCF_5F000956065.1_202015-03-19]
9,733 sequences; 2,948,703,511 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq37 95.1 9e-15
seq237 87.8 1e-12
>seq37
Length=10148950
Score = 95.1 bits (104), Expect = 9e-15
Identities = 124/171 (73%), Gaps = 3/171 (2%)
Strand=Plus/Minus
Query 22752 CTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTGAA 22811
|||||| || | |||||| || |||||||| | ||||| | ||||||||||| ||
Sbjct 6163467 CTTTGCTGCAGCGGAAGGCATC---TTTTCTGGTTATTTTGCATCGATATTCTGGCTCAA 6163411
Query 22812 GAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAAGG 22871
|||||| || ||||| || | | |||||||| || | ||||| | || || ||
Sbjct 6163410 GAAACGAGGACTGATGCCTGGCCTCACCTTTTCCAATGAACTTATTAGTGGAGATGAGGG 6163351
Query 22872 TCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACC 22922
| |||||||||| |||||||| || |||| | || ||| | |||||||
Sbjct 6163350 TTTACACTGTGATTTTGCTTGCCTGATGTTCAATCACCTGGTACACAAACC 6163300
>seq237
Length=7777549
Score = 87.8 bits (96), Expect = 1e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809
|||||||| || ||| || | | |||||||| || ||||| |||||||||||
Sbjct 5488482 GCCTTTGCCCTAGTGGAAAGCACCTTCTTTTCTGGTTCTTTTGCACTGATATTCTGGCTC 5488423
Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869
||||||| || ||||| || | | |||||||| || | |||||| |||| ||
Sbjct 5488422 AAGAAACAAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATTAGCAGTGATGAG 5488363
Query 22870 GGTCTACACTGTGACTTTGCTTG 22892
||| |||||||| ||||||||||
Sbjct 5488362 GGTTTACACTGTTACTTTGCTTG 5488340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356191343236399
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |