Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20nemestrina_20[refseq_20GCF_5F000956065.1_202015-03-19] 9,733 sequences; 2,948,703,511 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1670 170 4e-37 seq9446 168 2e-36 seq6668 163 7e-35 seq758 147 5e-30 seq4780 143 6e-29 seq5335 138 3e-27 seq1225 134 3e-26 seq359 129 1e-24 seq892 125 2e-23 seq8113 122 2e-22 seq8779 120 7e-22 seq8446 120 7e-22 seq1002 120 7e-22 seq891 120 7e-22 seq9297 114 3e-20 seq673 111 4e-19 seq2669 102 2e-16 seq4 98.7 2e-15 seq1558 96.9 8e-15 seq2224 95.1 3e-14 seq70 95.1 3e-14 seq3447 91.5 3e-13 >seq1670 Length=4706099 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | ||||| || || |||||||| |||||||| | ||| | || ||||| Sbjct 2974232 ACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATCTTCC 2974173 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || || || |||||||| || || || || ||||||||||| |||||||| |||||||| Sbjct 2974172 AGGTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 2974113 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| || ||||||||||||| ||||| ||||| ||||| || || || ||||| Sbjct 2974112 ATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTC 2974053 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || || || ||||| || || ||||||| ||| Sbjct 2974052 CCCGTGAGGGTTTTCACGAAAATCTGCACTTT 2974021 >seq9446 Length=14842378 Score = 168 bits (186), Expect = 2e-36 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | ||||| || || |||||||| |||||||| | ||| | || ||||| Sbjct 8610013 ACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATCTTCC 8609954 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 ||||| || |||||||| || || || || || ||||||| |||||||| || ||||| Sbjct 8609953 AGTTGCTTGCCAGCAAAGATCAGTCTTTGCAGAGCAGGAGGAATTCCTTCCTTCTCCTGG 8609894 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| || ||||||||||||| |||| ||||| ||||| || || || ||||| Sbjct 8609893 ATCTTGGCCTTTACATTTTCTATCGTATTCGAGGGTTCAACCTCGAGGGTGATGGTCTTC 8609834 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || ||||| ||||| || || |||||||||||| Sbjct 8609833 CCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 8609801 >seq6668 Length=25972781 Score = 163 bits (180), Expect = 7e-35 Identities = 162/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413 ||||| | |||| || || ||||| || ||||||| | ||| | |||||||| ||| Sbjct 3822653 AGATGAAGGGTAGGCTCCTTTTGAATGTTGCAGTCAGACAAAGTACGTCCGTCTTCCAGT 3822594 Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 || | |||||||| || || || || ||||||||||| |||||||| |||||||| ||| Sbjct 3822593 TGCTCGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATC 3822534 Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533 || || |||||||||||| | ||||| ||||| | ||| || || |||||||| || Sbjct 3822533 TTGGCCTTTACATTTTCTGCCGTATCTGAGGGTTCAATCTCAAGGGTGATAGTCTTCCCC 3822474 Query 104534 GTAAGTGTTTTTACAAATATCTGCATTTTG 104563 | || ||||| || || |||||||||||| Sbjct 3822473 CTTAGGGTTTTCACGAAAATCTGCATTTTG 3822444 Score = 95.1 bits (104), Expect = 3e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 104355 GATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTT 104414 |||| | || || |||| ||| | || || ||||| | ||| | || ||||| |||| Sbjct 7066669 GATGAAGAGTGGACTCTTCTTGAGTGTTGTAATCAGACAAAGTACGTCCATCTTCCAGTT 7066610 Query 104415 GTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCT 104474 | | ||||||| || || || || || |||||||| |||||||| |||||||| ||| Sbjct 7066609 GCTCGACAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGGTCT 7066550 Query 104475 TTGCTTTTACATTTTCTACGGTATC 104499 | || |||||||||||| ||||| Sbjct 7066549 TGGCCTTTACATTTTCTGTTGTATC 7066525 >seq758 Length=2790677 Score = 147 bits (162), Expect = 5e-30 Identities = 153/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || |||||||| || || |||||||| ||||| | || ||||| || || || || Sbjct 2565184 GTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 2565125 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||| || || || || || ||||| |||||||| || || || || Sbjct 2565124 GCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATTTTGGCCTTC 2565065 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||| | ||| || || || || ||||| || || || ||||| || || || || Sbjct 2565064 ACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTCTTGCCGGTCAGGGTC 2565005 Query 104543 TTTACAAATATCTGCATTTTG 104563 || || || |||||||||||| Sbjct 2565004 TTCACGAAGATCTGCATTTTG 2564984 Score = 140 bits (154), Expect = 7e-28 Identities = 150/197 (76%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || |||||||| ||||| | || ||||| || || || || Sbjct 2565640 GTTGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 2565581 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||| || || || || || |||||||||||||| ||||| || || Sbjct 2565580 GCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTC 2565521 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||| | ||| || || || || | ||| || || || ||||| || || || ||| Sbjct 2565520 ACATTTTCGATGGTGTCACTGGGCTCCA-CTCCAGGGTGATGGTCTTGCCGGTCAGGGTT 2565462 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 2565461 TTCACGAAGATCTGCAT 2565445 >seq4780 Length=17887985 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || | ||| | ||| | ||||| ||||| |||||||| |||||| | || | Sbjct 5698925 AGTCTCAATACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGTCAAA----GTACGT 5698980 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| ||||| || |||||||| || | ||||| || ||||||| |||||||| Sbjct 5698981 CCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTCTGCCGACCAGGAGGAATTCCTTCC 5699040 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 ||| |||| ||||| || | ||||||||||| || || ||||| |||| || || Sbjct 5699041 TTAACCTGGATCTTGGCCTATACATTTTCTATTGTGTCCGAGGGTTCACCCTCGAGGGTG 5699100 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || ||||| || ||||| ||| | || || |||||||||||| Sbjct 5699101 ATGGTCTTCCCTGTAAGGGTTATCACGAAAATCTGCATTTTG 5699142 >seq5335 Length=15219753 Score = 138 bits (152), Expect = 3e-27 Identities = 149/194 (77%), Gaps = 9/194 (5%) Strand=Plus/Minus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 ||||| |||| || |||||||| || | | || ||||| ||||| || |||||||| | Sbjct 13023361 CTTTC-GAATGTTGTAGTCAGACAG--TACATCCATCTTCCAGTTGCTTGCCAGCAAAGA 13023305 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489 | || ||||| | ||||||||| ||||||| | |||||| ||||| || |||||||||| Sbjct 13023304 TCAGTCTCTGCTCATCAGGAGGAATTCCTTGT--ATCCTGGATCTTGGCCTTTACATTTT 13023247 Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549 ||| ||||| |||||| ||||| || || || ||||| || |||| ||||| | Sbjct 13023246 CTATCGTATCCACAGGTTCGACCTCGAGGGTGATGGTCTTCCCTGTAA----TTTTATGA 13023191 Query 104550 ATATCTGCATTTTG 104563 | |||||| ||||| Sbjct 13023190 AAATCTGCGTTTTG 13023177 >seq1225 Length=21025059 Score = 134 bits (148), Expect = 3e-26 Identities = 148/199 (74%), Gaps = 11/199 (6%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || || ||||| || |||||||| | ||||| | ||| || ||| Sbjct 9810217 GTAGACTCCTTTTGAATGTTGTAGTCAGACA-----------TCTTCCAATTGCTTGCCA 9810169 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || || || ||||||||||| |||||||| |||||||| || || || ||| Sbjct 9810168 GCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATATTGGCCTTT 9810109 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||||||| || | ||||| ||||| || || || ||||| || ||||| ||| Sbjct 9810108 ACATTTTCTGTTGTGTTCAAGGGTTCAACCTCAAGGGTGATGGTCTTCCCTGTAAGGGTT 9810049 Query 104543 TTTACAAATATCTGCATTT 104561 || ||||| |||||||||| Sbjct 9810048 TTCACAAAAATCTGCATTT 9810030 >seq359 Length=9844545 Score = 129 bits (142), Expect = 1e-24 Identities = 158/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413 ||||| | ||||| || || ||||| | |||||||| | ||| | || || || ||| Sbjct 8207730 AGATGAAGAGTAGACTCCTTTTGAATGTG-TAGTCAGACAAAGTACATCCATCCTCCAGT 8207788 Query 104414 TGTTTT--CCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAA 104471 || ||| | |||||| || || || || ||||||||| |||||||| |||||||| | Sbjct 8207789 TGCTTTTGCTAGCAAAGATCAGTCTTTGCCCATCAGGAGGAATTCCTTCCTTATCCTGGA 8207848 Query 104472 TCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTAC 104531 |||| || |||||||||| || |||| ||||| ||||| || || || ||||| | Sbjct 8207849 TCTTGGCCTTTACATTTTTGTCG-TATCTGAGGGTTCAACCTCGAGGGTGATGGTCTTCC 8207907 Query 104532 CAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 | ||||| ||||| || |||||||||||| Sbjct 8207908 CTGTAAGGGTTTTCGTGAAAATCTGCATTTTG 8207939 >seq892 Length=8016392 Score = 125 bits (138), Expect = 2e-23 Identities = 148/199 (74%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 104366 GATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCA 104425 || ||||||||||| || |||||||| ||||| | || |||||||| | || || || Sbjct 5021616 GACTCTTTCTGAATGTTGTAGTCAGAAAGAGTGCAGCCATCTTCTAGCCGCTTGCCTACA 5021557 Query 104426 AAAATTAGCCTCTGTTGATCAG-GAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTAC 104484 || || || ||||| || |||| | || || |||||||||||||| ||||| || || || Sbjct 5021556 AAGATGAGACTCTGCTGGTCAGTGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCAC 5021497 Query 104485 ATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTT 104544 ||||| | | | || || || || ||||| || | || ||||| || | || ||||| Sbjct 5021496 ATTTTGGAGGATGTCACTGGGCTCCACCTCCAGGGAGATGGTCTTGCCGGGCAGGGTTTT 5021437 Query 104545 TACAAATATCTGCATTTTG 104563 | || || ||||||||| Sbjct 5021436 CAGGAAGATTTGCATTTTG 5021418 >seq8113 Length=17333038 Score = 122 bits (134), Expect = 2e-22 Identities = 121/157 (77%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 104406 CTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTAT 104465 |||| ||||| || |||||||| || || || || | | ||||| | ||||||| |||| Sbjct 15785372 CTTCCAGTTGCTTGCCAGCAAAGATAAGTCTTTGCTAACCAGGAAGATTTCCTTCCTTAT 15785313 Query 104466 CCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAG 104525 |||| ||||| || ||||||||||||| || || |||||| ||||| || || || Sbjct 15785312 CCTGGATCTTGGCCTTTACATTTTCTATTGTGTCTGAAGGTTCAACCTCCAGAGTGGCAG 15785253 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 |||| | ||||| | ||||| ||| ||||||||||| Sbjct 15785252 TCTTCTCTGTAAGAGATTTTATAAAAATCTGCATTTT 15785216 >seq8779 Length=15682990 Score = 120 bits (132), Expect = 7e-22 Identities = 151/206 (73%), Gaps = 5/206 (2%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||||||||| ||||| || |||||||| | ||| || | ||| |||| || ||| Sbjct 15156781 GTAGATTCTTTTTGAATGTTGTAGTCAGAGAAAGTATGTCCATATTCCAGTTACTTGCCA 15156722 Query 104423 GCAAAAATTAGC----CTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGC 104478 || | | || || || ||||||||||| |||||||| |||||||| || || || Sbjct 15156721 GCTTCCAGTCGCTTGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATATTGGC 15156662 Query 104479 TTTTACA-TTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAA 104537 |||||| ||||| ||||| ||||| ||||| || || || |||| || |||| Sbjct 15156661 CTTTACATTTTTCGGTTGTATCCGAGGGTTCAACCTCGAGGGTGATGATCTTCCCTGTAA 15156602 Query 104538 GTGTTTTTACAAATATCTGCATTTTG 104563 | | ||| |||| |||||||||||| Sbjct 15156601 GGATATTTGCAAAAATCTGCATTTTG 15156576 >seq8446 Length=17995230 Score = 120 bits (132), Expect = 7e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | ||||| || || |||||||| |||||||| | ||| | | ||||| Sbjct 4537460 ACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTCCATGCATCTTCC 4537519 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 ||||| || |||||||| || ||| || ||| ||||||| |||||||| |||||||| Sbjct 4537520 AGTTGCTTGCCAGCAAAGATCCCCCTTTGCTGAGCAGGAGGAATTCCTTCCTTATCCTGG 4537579 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATC 104499 |||| || ||||||||||||| ||||| Sbjct 4537580 ATCTCGGCCTTTACATTTTCTATCGTATC 4537608 Score = 107 bits (118), Expect = 4e-18 Identities = 139/189 (74%), Gaps = 5/189 (3%) Strand=Plus/Plus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 ||||||| || || |||||||| ||||| | ||||| || || || || || || | Sbjct 1157985 CTTTCTGGATTTTGTAGTCAGAAAGAGTGTGGACATCTTCCAGCTGCTTGCCTGCGAAGA 1158044 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489 | |||||||| || || || || || ||||||||||||| ||| ||| ||| ||||||| Sbjct 1158045 TGAGCCTCTGCTGGTCTGGGGG-ATGTCTTCTTTATCCTGGATC-TTGGTTTCACATTTT 1158102 Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549 | | | || || || ||||| || || || ||||| ||||| || || || |||| Sbjct 1158103 CAGTGCTGTCACT---GTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAA 1158159 Query 104550 ATATCTGCA 104558 | ||||||| Sbjct 1158160 AGATCTGCA 1158168 >seq1002 Length=29577158 Score = 120 bits (132), Expect = 7e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||||||||| || || |||||||| ||||| | || ||||| || || | || Sbjct 10709365 GTCGATTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCATGCCT 10709306 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||| | || || || ||||| |||||||| || || || || Sbjct 10709305 GCAAAGATGAGCCTCTGCGGGTCGGGGCAGATGCCTTCCTTATCCTGGATATTGGCCTTC 10709246 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||||| | ||| || || || || || || || || || ||||| |||| || || Sbjct 10709245 ACATTTTAGATGGTGTCACTGGGCTCCACATCAAGGGTGATGGTCTTGTCAGTCAGGGTC 10709186 Query 104543 TTTACAAATATCTGCATTTTG 104563 || || || | |||||||||| Sbjct 10709185 TTCACGAAGACCTGCATTTTG 10709165 >seq891 Length=31049660 Score = 120 bits (132), Expect = 7e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || |||||||| || ||||||||||| ||| | | | ||||| | || || | Sbjct 21157930 GTCGACTCTTTCTGGATGTTATAGTCAGAAAGAATGCGGTCATCTTCCACCTGCTTGACT 21157989 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||| || ||| |||| || || || | || ||||| |||||||| ||||| || || Sbjct 21157990 GCAAGGATGAGCGTCTGCTGCTCGGGGAGAATGCCTTCCTTATCCTGGATCTTGGCCTTC 21158049 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||| | ||| || || || || ||||| || | ||| ||||| | ||||| | Sbjct 21158050 ACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGCAATGGTCTTGCAGGTAAGGCTC 21158109 Query 104543 TTTACAAATATCTGCATTTTG 104563 || || || |||||||||||| Sbjct 21158110 TTCACGAAGATCTGCATTTTG 21158130 Score = 118 bits (130), Expect = 2e-21 Identities = 160/223 (72%), Gaps = 10/223 (4%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || |||||||| || | ||||||||| ||||| | || || Sbjct 21157676 AAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTCATAGTCAGAAAGAGTGCGGCCATC 21157735 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGAT-----CAGGAGGTA-----TTC 104456 ||| || || || || ||||| || |||||||| || | | || |||| | | Sbjct 21157736 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTTGGGGCTGGGGGTAGGGGGTGC 21157795 Query 104457 CTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTA 104516 ||||||||||||| ||||| || || ||||||| | ||| | || || || || || | Sbjct 21157796 CTTCTTTATCCTGGATCTTGGCCTTCACATTTTTGATGGTGCCACTGGGCTCCACTTCCA 21157855 Query 104517 GTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | || || ||||| ||| | || || || ||||| |||||||| Sbjct 21157856 GGGTGATGGTCTTGCCAATCAGGGTCTTCACAAAGATCTGCAT 21157898 >seq9297 Length=17183 Score = 114 bits (126), Expect = 3e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 269126 GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCC 269185 || ||||| | || || ||||| ||||||||||| || ||||| || || |||||||| Sbjct 1564 GGGGAAAGAGTGGTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCAGGATCTTTTGCT 1623 Query 269186 GCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTG 269245 ||||| || ||| | ||||| ||||| |||||||||||| | ||||| || || ||| | Sbjct 1624 GCTATATTCTGGCTAAAGAAGAGAGGTCTTATGCCAGGACTCACTTTTTCCAATGAACTC 1683 Query 269246 ATAAGCAGGGACGAAG 269261 || ||||| || |||| Sbjct 1684 ATCAGCAGAGATGAAG 1699 >seq673 Length=10811 Score = 111 bits (122), Expect = 4e-19 Identities = 148/204 (73%), Gaps = 5/204 (2%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || ||||| ||||||||||| | || | |||||||| ||||| || ||| Sbjct 6444 GTGGACTCCTTTTGAATGTTATAGTCAGACAAAGCACATCCGTCTTCCAGTTGCTTGCCA 6503 Query 104423 GCAAAAATTAGCCT---CTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT 104479 ||||| || || || || || ||||||| |||||||| |||||||| ||||| ||| Sbjct 6504 GCAAAGATCAGTCTTTACTACTGGTCAGGAGAAATTCCTTCCTTATCCTGGATCTTGGCT 6563 Query 104480 TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 ||||||||| || |||| ||||| ||||| || | || | || | ||| Sbjct 6564 TTTACATTTCCT--TGTATTCAAGGGTTCAACCTCAAGAGCGATGGCTTTCTCCATAAAG 6621 Query 104540 GTTTTTACAAATATCTGCATTTTG 104563 | | ||| || |||||||||||| Sbjct 6622 GGTGTTATGAAAATCTGCATTTTG 6645 >seq2669 Length=26345091 Score = 102 bits (112), Expect = 2e-16 Identities = 151/207 (73%), Gaps = 9/207 (4%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATA-GTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421 || || || || ||||| ||||| |||||| | || | |||||||| ||||| || || Sbjct 15471804 GTGGACTCCTTTTGAATGTTATAAGTCAGACAAAGCACATCCGTCTTCCAGTTGCTTGCC 15471745 Query 104422 AGCAAAAATTAGCCT---CTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGC 104478 |||||| || || || || || ||||||| |||||||| |||||||| ||||| || Sbjct 15471744 AGCAAAGATCAGTCTTTACTACTGGTCAGGAGAAATTCCTTCCTTATCCTGGATCTTGGC 15471685 Query 104479 TTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG-TCTTACCAGTA 104536 |||||||||| || |||| | |||| || ||||| || | || | | | ||| | Sbjct 15471684 TTTTACATTTCCT--TGTAT-TCAAGGTCTCAACCTCAAGAGCGATGGCTTTCTCCATAA 15471628 Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563 || || || || |||||||||||| Sbjct 15471627 AGGGTGTTATGGAAAATCTGCATTTTG 15471601 >seq4 Length=12889960 Score = 98.7 bits (108), Expect = 2e-15 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 78494 TGGTGGTATTATATCTCTAAAGGAATAGAATACCTAGATACTATCTTCTTCATCCTACGA 78553 |||||||| | | | ||||||||| | || || | || || | || || || || || Sbjct 122831 TGGTGGTACTTTGTTTCTAAAGGAGTTGAGTATTTGGACACAGTGTTTTTTATTCTGAGA 122772 Query 78554 AAGAAATTTAATCAAATTAGTTTTCTACATGTATATCATCATTTTACTATGTTTACTTTG 78613 |||||| || || || ||| || ||||| |||||||| | ||| |||||||| ||| Sbjct 122771 AAGAAAAACAACCAGGTTTCTTTCCTTCATGTGTATCATCACTGTACGATGTTTACCTTG 122712 Query 78614 GGATGGATAGGTATTAAATGGTTCGCAGGAGGACAAG 78650 | ||||| || ||||| ||| | ||||||||||||| Sbjct 122711 TGGTGGATTGGAATTAAGTGGGTTGCAGGAGGACAAG 122675 >seq1558 Length=28977278 Score = 96.9 bits (106), Expect = 8e-15 Identities = 150/213 (70%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | ||||| || || ||||| || || |||| | || | || |||| Sbjct 3229682 ACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTATCCAGACAAAGCACATCCACCTTCC 3229741 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 |||| || ||| || | || | || || ||||||| || |||||| |||||||| Sbjct 3229742 AGTTTCTTGCCAACACAGATCGGTCTTTGCTGATCAGTAGAAATTCCTGTTTTATCCTAG 3229801 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| | ||| |||||||| ||||| ||||| | ||| || || || ||||| Sbjct 3229802 ATCTTGGACTTTGCATTTTCTGTTGTATCCAAGGGTTCAAACTCAAGAGTGATGGTCTTT 3229861 Query 104531 CCAGTAAGTGTTTTTACA-AATATCTGCATTTT 104562 || |||||||||||| | || ||||| |||| Sbjct 3229862 CCCATAAGTGTTTTTAAAGAAAATCTGTGTTTT 3229894 >seq2224 Length=56261439 Score = 95.1 bits (104), Expect = 3e-14 Identities = 144/201 (72%), Gaps = 7/201 (3%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| | || ||||| || |||| || ||| || | ||||| ||||| || ||| Sbjct 15903427 GTAGACTACTTTTGAATGTTGTAGT----TAAAGTACTTTCATCTTCCAGTTGCTTGCCA 15903372 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||| || || || || ||||| | | | | |||| |||||||| ||||| ||||| Sbjct 15903371 TCAAACATCAGTCTTTGCTGATCCGTACAGACTTCTTCCTTATCCTGGATCTTC-CTTTT 15903313 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||| | ||| ||||| | || || || | |||||||| || | ||| Sbjct 15903312 -CATTTTCTGTTGCATCCAAGGGTTCAATCTTGAGGGTGGTGGTCTTACCCATAGG-GTT 15903255 Query 104543 TTTACAAATATCTGCATTTTG 104563 |||||||| |||||||||||| Sbjct 15903254 TTTACAAAAATCTGCATTTTG 15903234 >seq70 Length=10360153 Score = 95.1 bits (104), Expect = 3e-14 Identities = 117/159 (74%), Gaps = 1/159 (1%) Strand=Plus/Minus Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464 |||| ||||| || |||||||| || || ||||| |||||||||| |||||||||||| Sbjct 1262288 TCTTTCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGAAATTCCTTCTTTA 1262229 Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524 | ||| ||||| || ||| ||||||| || || ||||| ||| || || | Sbjct 1262228 TTCTGGATCTTGGCCTTTGGATTTTCTGTTGTGTCCAAGGGTTCAGCCTTGAGAGTGGT- 1262170 Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 | || | ||||| |||||| || |||||||||||| Sbjct 1262169 GCTTTTTCTGTAAGGACTTTTACGAAAATCTGCATTTTG 1262131 >seq3447 Length=26059670 Score = 91.5 bits (100), Expect = 3e-13 Identities = 129/178 (72%), Gaps = 10/178 (6%) Strand=Plus/Plus Query 104384 TAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGA 104443 ||||||||| | || || | ||||| |||||||| | ||||| || ||| || Sbjct 17161151 TAGTCAGATGGCGTGCT--CATCTTCCAGTTGTTT-CTGGCAAAGAT------CTGCTGG 17161201 Query 104444 TCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTA 104503 ||||| | | | || | ||| ||||||||||| || ||||| || | ||| || || Sbjct 17161202 TCAGGGAGAAGGACCTCCTCATCTTGAATCTTTGCCTTGACATTCTCAATGGTGTCACTG 17161261 Query 104504 GGTTCTACCTCTAGTGTAATAGTCTTACCAGT-AAGTGTTTTTACAAATATCTGCATT 104560 ||||| ||||| || ||||| || ||||| || ||| ||| ||||| ||||||||| Sbjct 17161262 GGTTCGACCTCGAGGGTAATGGTATTACCTGTCAAGGTGTTTCACAAAGATCTGCATT 17161319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151254815941964