Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20nemestrina_20[refseq_20GCF_5F000956065.1_202015-03-19] 9,733 sequences; 2,948,703,511 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq225 109 5e-19 >seq225 Length=41818005 Score = 109 bits (120), Expect = 5e-19 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| ||||||||||||| ||||| ||||| || ||||| ||||| || || Sbjct 37295714 GGTTGCCAAGCCTTGTCTGAGATGATCCAGTTTTACCTGGAGGAGGTGATGCCCCAAGCT 37295655 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 || || |||| || ||||| || || || || || |||||||| || || |||||||| Sbjct 37295654 GAGAACCACGACCCAGACATCAAGGAGCATGTGAACTCCCTGGGGGAGAATCTGAAGACC 37295595 Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313 | || || | ||||| ||||| Sbjct 37295594 CTCAGGCTGAGGCTGCGGCGCTG 37295572 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 127379 AGCTTCAGGAAAGAGGCGTGTACAAGGCCATGAGTGAGTTTGACATATTCATCAACTACA 127438 |||| || || | |||||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct 37293328 AGCTCCAAGAGAAAGGCGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 37293269 Query 127439 TCGAGACTTACATG 127452 | || | |||||| Sbjct 37293268 TAGAAGCCTACATG 37293255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430003386543896