Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20nemestrina_20[refseq_20GCF_5F000956065.1_202015-03-19] 9,733 sequences; 2,948,703,511 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq7002 95.1 1e-14 >seq7002 Length=12659153 Score = 95.1 bits (104), Expect = 1e-14 Identities = 165/234 (71%), Gaps = 7/234 (3%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||| ||| |||| |||||| || || ||| ||| ||||| |||||||| |||| Sbjct 9467041 CCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAG 9467100 Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | | || || | || |||| || ||||||||||||||||| |||||||| || || Sbjct 9467101 AGAGTGCGGC-CATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGG 9467159 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAA--CTCACACTATCAGTAGATTCG 34077 | | ||| |||| | | | |||| |||| || | |||| | ||| | | ||| Sbjct 9467160 GATACCCTCCTTGT-CTTGAATTTTGGCTT--TGACATTCTCATGGTGTCACTGGGCTCG 9467216 Query 34078 CATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTTT 34131 | || || || ||||| || || || || ||||||||||| ||||| ||| Sbjct 9467217 ACCTTGAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGTTT 9467270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397015300085866