Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20nemestrina_20[refseq_20GCF_5F000956065.1_202015-03-19] 9,733 sequences; 2,948,703,511 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq7002 91.5 1e-13 >seq7002 Length=12659153 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/231 (69%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || | |||||| || ||||| || || || || ||||| || || || Sbjct 9467038 ATGCCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCT 9467097 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || ||| |||| ||||| || || |||||| || |||||||| || Sbjct 9467098 GAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGT 9467157 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCT-ACGGTGTCGGAAGACTC 45289 || || || || || ||||||||||| ||||| |||| | |||||| | ||| Sbjct 9467158 GGGATACCCTCCTTGTCTTGAATTTTGGCTTTGA--CATTCTCATGGTGTCACTGGGCTC 9467215 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| | ||| || | |||||||| || || || || ||||| || ||||| Sbjct 9467216 GACCTTGAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 9467266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451948208160680