Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20nemestrina_20[refseq_20GCF_5F000956065.1_202015-03-19] 9,733 sequences; 2,948,703,511 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1670 154 3e-32 seq758 145 2e-29 seq9446 141 2e-28 seq3 123 6e-23 seq2225 113 1e-19 seq1002 113 1e-19 seq8446 105 2e-17 seq7002 102 2e-16 seq359 102 2e-16 seq5335 100 7e-16 seq4780 100 7e-16 seq891 98.7 2e-15 seq892 96.9 8e-15 seq7446 95.1 3e-14 seq673 89.7 1e-12 seq6668 87.8 4e-12 seq70 87.8 4e-12 seq1299 86.0 1e-11 seq1 84.2 5e-11 >seq1670 Length=4706099 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||||| ||||| || ||||| ||||||||||| | |||||||||| |||||| Sbjct 2974244 CGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTA 2974185 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||||| ||||| || || ||||| || | ||||| || ||| ||||||| Sbjct 2974184 CGTCCATCTTCCAGGTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCT 2974125 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || ||| | || || | | ||| || || | Sbjct 2974124 TCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGG 2974065 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| |||||||| |||||||| ||||| || Sbjct 2974064 GTGATGGTCTTCCCCGTGAGGGTTTTCACGAAAATCTG 2974027 Score = 95.1 bits (104), Expect = 3e-14 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| ||| ||||| || || ||||| ||||||||||| | |||||| | || ||||| Sbjct 2974145 AAAGACTGATCTTTGCTGGCAAGCACCTGGAAGATGGACGTACTTTGTCTGACTACAATA 2974204 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 | || || |||||||||||||| ||||| ||||||||||| Sbjct 2974205 TTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCG 2974244 >seq758 Length=2790677 Score = 145 bits (160), Expect = 2e-29 Identities = 159/210 (76%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| ||||| || || |||||||| |||| ||||||||||| | ||| | ||||| Sbjct 2565656 CAGGACCAGGTGCAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATC 2565597 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| || || |||||||| | ||||||||| || || |||||| || Sbjct 2565596 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATC 2565537 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| |||||| ||||| |||||| | | || || |||| ||||| || Sbjct 2565536 CTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCAC-TCCAGGGTGATGGT 2565478 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || |||||||| || || || Sbjct 2565477 CTTGCCGGTCAGGGTTTTCACGAAGATCTG 2565448 Score = 131 bits (144), Expect = 4e-25 Identities = 163/220 (74%), Gaps = 5/220 (2%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGG-AGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCAT 199475 ||||||| ||||| || |||||||| || |||| ||||||||||| | ||| | |||| Sbjct 2565200 CAGGACA-GGTGGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCAT 2565142 Query 199476 CTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCT 199535 ||||||||||||| || || |||||||| | ||||||||| || ||| ||||| | Sbjct 2565141 CTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTAT 2565082 Query 199536 CCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCG 199595 |||| || || |||||| ||||| |||||| | | || || || | ||||| | Sbjct 2565081 CCTGGATTTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGG 2565022 Query 199596 TCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 |||| || || || || ||||| || || || |||||| Sbjct 2565021 TCTTGCCGGTCAGGGTCTTCACGAAGATCTG---CATTTT 2564985 Score = 105 bits (116), Expect = 2e-17 Identities = 159/219 (73%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 199417 CAGGACA-AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCAT 199475 |||||| ||||| || |||||||| || |||| ||||||||||| | ||| | |||| Sbjct 2565428 CAGGACCCAGGTGCAGGGTCGACTC-TTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCAT 2565370 Query 199476 CTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTC-CGGAAAAATTCCTTCTCGC 199534 ||||||||||||| || || |||||||| | ||||||||| || ||| ||||| Sbjct 2565369 CTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGAATGCCTTCCTTA 2565310 Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594 ||||| || || |||||| ||||| |||||| | | | | || | ||||| Sbjct 2565309 TCCTGGATTTTGGCCTTCACATTTTCGATGGTGTCACTGG--GCACCCTCAAGGGTGATG 2565252 Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTG--GTACA 199631 ||||| || || || || ||||| || || || ||||| Sbjct 2565251 GTCTTGCCGGTCAG-GTCTTCACGAAGATCTGCAGTACA 2565214 >seq9446 Length=14842378 Score = 141 bits (156), Expect = 2e-28 Identities = 168/227 (74%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||||| ||||| || ||||| ||||||||||| | |||||||||| |||||| Sbjct 8610025 CGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTA 8609966 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||||| ||||| || || ||||| || | ||| | | ||| ||||||| Sbjct 8609965 CGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCAGAGCAGGAGGAATTCCT 8609906 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || |||||| ||||| ||| || ||| | || | | | ||| || || | Sbjct 8609905 TCCTTCTCCTGGATCTTGGCCTTTACATTTTCTATCGTATTCGAGGGTTCAACCTCGAGG 8609846 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 ||||| ||||| ||||| || |||||||| ||||| || |||||| Sbjct 8609845 GTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTG---CATTTT 8609802 Score = 95.1 bits (104), Expect = 3e-14 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| ||| ||||| || || ||||| ||||||||||| | |||||| | || ||||| Sbjct 8609926 AAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAATA 8609985 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 | || || |||||||||||||| ||||| ||||||||||| Sbjct 8609986 TTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCG 8610025 >seq3 Length=16319837 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 ||||| || || ||||| || |||| ||||||||||| || || | |||||||||||| Sbjct 4626397 AGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGC 4626338 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543 ||||||||||| ||||| || | ||||||||| ||| ||| ||||| || || ||| Sbjct 4626337 TGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTATCTTGGATC 4626278 Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603 ||| ||| || || | |||||| | | || || || | ||||| ||||| || Sbjct 4626277 TTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCA 4626218 Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || || Sbjct 4626217 GTCAGGGTCTTCACGAAGATCTG 4626195 Score = 100 bits (110), Expect = 7e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| | ||| ||||| ||||| || |||| ||||||||||| || || | |||||| Sbjct 4628613 CAGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATC 4628554 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||||||||| || || || ||||| | | ||||||||| ||| || ||||| || Sbjct 4628553 TTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTC 4628494 Query 199537 CTGAATCTTTTGCTTCAC 199554 ||| |||||| ||| || Sbjct 4628493 CTGGATCTTTGCCTTGAC 4628476 Score = 86.0 bits (94), Expect = 1e-11 Identities = 92/117 (79%), Gaps = 5/117 (4%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTT-TGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 || || ||||| || || |||| |||| |||| ||||||||||| || || | ||||| Sbjct 4627594 AGCACCAGGTGCAGGGTGGACTTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 4627653 Query 199477 TTCCAGCTGCT-TTCCGGCGAAGATGAGACGCTGCTGGTCCGGAA--AAATTCCTTC 199530 ||||||||||| ||||||| |||| | | |||||||||||| | |||| ||||| Sbjct 4627654 TTCCAGCTGCTGTTCCGGCAAAGA-GCACCTCTGCTGGTCCGGGAGGAAATGCCTTC 4627709 >seq2225 Length=31540782 Score = 113 bits (124), Expect = 1e-19 Identities = 157/211 (74%), Gaps = 8/211 (4%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| ||||| || ||||||||||| |||| |||||| |||| | ||| | ||||| Sbjct 23425173 CAGGACCAGGTGCAG-GTCGACTCCTTCTGGATGTTGTA-TCAGAAAGAGTGCGGCCATC 23425116 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| || || |||||||| | ||||||||| || | | ||||| || Sbjct 23425115 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGA--TGCTTCT-TATC 23425059 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| |||||| ||||| |||||| || || || |||| ||||| || Sbjct 23425058 CTGGATCTTGGCCTTCAC-ATTTCGATGGTGTC-ACTGGCTCCACTTCCAGGGTGATGGT 23425001 Query 199597 -CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || || ||||| || || || Sbjct 23425000 GCTTGCCGGTCAGGGTCTTCACGAAGATCTG 23424970 Score = 100 bits (110), Expect = 7e-16 Identities = 154/212 (73%), Gaps = 7/212 (3%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| || || || || |||||||| |||| ||||||||||| | ||| | |||| Sbjct 23425398 CAGGACCAG-TGCAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCAT- 23425341 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT-CTCGCT 199535 ||||||||||| || || |||||||| | |||||||| || || |||| || | Sbjct 23425340 -TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTTGGGGGGGATGCCTTCCTTTAT 23425282 Query 199536 CCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTA-CATCCAACGTGATC 199594 |||| ||||| |||||| ||||| |||||| | | || | | |||| ||||| Sbjct 23425281 CCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTTCCAGGGTGATG 23425222 Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| |||| || | |||||| || || || Sbjct 23425221 GTCTT-GCCGTCAG-GGTTTCACGAAGATCTG 23425192 >seq1002 Length=29577158 Score = 113 bits (124), Expect = 1e-19 Identities = 146/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 199419 GGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTT 199478 |||| ||||| || ||||| || || |||| ||||||||||| | ||| | ||||||| Sbjct 10709379 GGACCAGGTGCAGGGTCGATTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTT 10709320 Query 199479 CCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCT 199538 |||||||| | || || |||||||| | |||| |||| || | || ||||| |||| Sbjct 10709319 CCAGCTGCATGCCTGCAAAGATGAGCCTCTGCGGGTCGGGGCAGATGCCTTCCTTATCCT 10709260 Query 199539 GAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCT 199598 | || || |||||| || || |||||| | | || ||||| | ||||| |||| Sbjct 10709259 GGATATTGGCCTTCACATTTTAGATGGTGTCACTGGGCTCCACATCAAGGGTGATGGTCT 10709200 Query 199599 TACCCGTGAGAGTTTTCACAAA 199620 | | || || || ||||| || Sbjct 10709199 TGTCAGTCAGGGTCTTCACGAA 10709178 >seq8446 Length=17995230 Score = 105 bits (116), Expect = 2e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||||| ||||| || ||||| ||||||||||| | |||||||||| ||||||| Sbjct 4537448 CGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTC 4537507 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | | |||||||||| ||||| || || ||||| | ||||| | ||| ||||||| Sbjct 4537508 CATGCATCTTCCAGTTGCTTGCCAGCAAAGATCCCCCTTTGCTGAGCAGGAGGAATTCCT 4537567 Query 199529 TCTCGCTCCTGAATCT 199544 || ||||| |||| Sbjct 4537568 TCCTTATCCTGGATCT 4537583 Score = 104 bits (114), Expect = 6e-17 Identities = 151/210 (72%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| ||||| || || ||| | || |||| |||||||||| | ||| |||| Sbjct 1157962 CAGGACCAGGTGCAGGGTGGACACTTTCTGGATTTTGTAGTCAGAAAGAGTGTGGACATC 1158021 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| || ||||||||||| | ||||||||| || || ||||| || Sbjct 1158022 TTCCAGCTGCTTGCCTGCGAAGATGAGCCTCTGCTGGTCTGG-GGGATGTCTTCTTTATC 1158080 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||| || | ||||| ||| | |||| | || || |||| ||||| || Sbjct 1158081 CTGGATC-TTGGTTTCACATTTTCAGTGCTGTC---ACTGTCCACCTCCAGGGTGATGGT 1158136 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || |||||||| || || Sbjct 1158137 CTTGCCAGTGAGGGTCTTCACAAAGATCTG 1158166 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 ||||| || || ||||| ||||||||| | |||||||| | || ||||| | || || Sbjct 4537539 ATCTTTGCTGGCAAGCAACTGGAAGATGCATGGACTTTGTCTGACTACAATATTCAAAAG 4537480 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 |||||||||||||| ||||| ||||||||||| Sbjct 4537479 GAGTCTACTCTTCATCTTGTGTTGAGACTTCG 4537448 >seq7002 Length=12659153 Score = 102 bits (112), Expect = 2e-16 Identities = 158/221 (71%), Gaps = 5/221 (2%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 ||| || | || || ||||| || || ||||| || |||| ||||||||| | | ||| Sbjct 9467046 TCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGT 9467105 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | |||||||||||||| || ||||| || || |||||||||||||| || || || Sbjct 9467106 GCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACC 9467165 Query 199528 TTCTCGCTCCTGAATCTTTTGC-TTCACGGATTC-GACGGTGTCTGTTGTTTCTACATCC 199585 || || ||||| ||| || || || |||| | |||||| | | || || | Sbjct 9467166 CTCCTTGTCTTGAAT-TTTGGCTTTGAC--ATTCTCATGGTGTCACTGGGCTCGACCTTG 9467222 Query 199586 AACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | ||||| || || |||||||| || |||||||| || || Sbjct 9467223 AGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGATCTG 9467263 >seq359 Length=9844545 Score = 102 bits (112), Expect = 2e-16 Identities = 162/228 (71%), Gaps = 7/228 (3%) Strand=Plus/Plus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469 ||||| ||| |||| || ||||| ||||||||||| | | ||||||||| |||||| | Sbjct 8207716 GAAGTGTCAACGCAAGATGAAGAGTAGACTCCTTTTGAATG-TGTAGTCAGACAAAGTAC 8207774 Query 199470 TTCCATCTTCCAGCTGCTTT--CCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 |||||| ||||| |||||| | || ||||| || | ||| || ||| |||||| Sbjct 8207775 ATCCATCCTCCAGTTGCTTTTGCTAGCAAAGATCAGTCTTTGCCCATCAGGAGGAATTCC 8207834 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| ||||| ||||| ||| || || | | || |||| | ||| || || | Sbjct 8207835 TTCCTTATCCTGGATCTTGGCCTTTACATTTTTGTC-GTATCTGAGGGTTCAACCTCGAG 8207893 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 ||||| ||||| || || || |||||| ||||| || |||||| Sbjct 8207894 GGTGATGGTCTTCCCTGTAAGGGTTTTCGTGAAAATCTG---CATTTT 8207938 >seq5335 Length=15219753 Score = 100 bits (110), Expect = 7e-16 Identities = 105/136 (77%), Gaps = 4/136 (3%) Strand=Plus/Minus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469 ||||||||| ||||| || ||||| | ||||||| | | ||||||||||| || || | Sbjct 13023392 GAAGTCTCAACACAAGATGAAGAGTGGGCTCCTTTCGAATGTTGTAGTCAGACA--GTAC 13023335 Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529 |||||||||||| ||||| || || ||||| || | ||||| || ||| |||||||| Sbjct 13023334 ATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTCATCAGGAGGAATTCCTT 13023275 Query 199530 CTCGCTCCTGAATCTT 199545 | ||||| ||||| Sbjct 13023274 GT--ATCCTGGATCTT 13023261 >seq4780 Length=17887985 Score = 100 bits (110), Expect = 7e-16 Identities = 159/227 (70%), Gaps = 7/227 (3%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||||| |||| || ||||| ||||| ||||| | ||||||||| |||| Sbjct 5698922 CGAAGTCTCAATACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGTCA----AAGTA 5698977 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||||| ||||| || || ||||| | | |||| | | ||| ||||||| Sbjct 5698978 CGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTCTGCCGACCAGGAGGAATTCCT 5699037 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || |||| ||||| || || ||| | ||||| | | ||| | || | Sbjct 5699038 TCCTTAACCTGGATCTTGGCCTATACATTTTCTATTGTGTCCGAGGGTTCACCCTCGAGG 5699097 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 ||||| ||||| || || || ||| |||| ||||| || |||||| Sbjct 5699098 GTGATGGTCTTCCCTGTAAGGGTTATCACGAAAATCTG---CATTTT 5699141 >seq891 Length=31049660 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/219 (70%), Gaps = 10/219 (5%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || |||||||| || |||| || ||||||| | ||| | |||||| Sbjct 21157677 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTCATAGTCAGAAAGAGTGCGGCCATCT 21157736 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGT-----CCGGAAAAA-----TTCC 199527 ||||||||||| || || |||||||| | |||||||| | || | | || Sbjct 21157737 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTTGGGGCTGGGGGTAGGGGGTGCC 21157796 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 |||| ||||| ||||| |||||| || || |||| | | | || || |||| Sbjct 21157797 TTCTTTATCCTGGATCTTGGCCTTCACATTTTTGATGGTGCCACTGGGCTCCACTTCCAG 21157856 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || | || || |||||||| || || Sbjct 21157857 GGTGATGGTCTTGCCAATCAGGGTCTTCACAAAGATCTG 21157895 Score = 96.9 bits (106), Expect = 8e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||||||||| || |||||||| || |||| ||| ||||||| | | | | |||| Sbjct 21157914 CAGGACAAGGTGCAGGGTCGACTCTTTCTGGATGTTATAGTCAGAAAGAATGCGGTCATC 21157973 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||||| |||||| | || | |||||| |||||| || || | ||| ||||| || Sbjct 21157974 TTCCACCTGCTTGACTGCAAGGATGAGCGTCTGCTGCTCGGGGAGAATGCCTTCCTTATC 21158033 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTC 199569 ||| ||||| |||||| ||||| |||||| Sbjct 21158034 CTGGATCTTGGCCTTCACATTTTCGATGGTGTC 21158066 >seq892 Length=8016392 Score = 96.9 bits (106), Expect = 8e-15 Identities = 154/219 (70%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||| ||||| || | ||||| || || | ||||||||||| | ||| | |||||| Sbjct 5021634 AGGAAGAGGTGCAGGGCTGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTGCAGCCATCT 5021575 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCG-GAAAAATTCCTTCTCGCTC 199536 || ||| |||| || | |||||||||| ||||||||| | | || |||||| || Sbjct 5021574 TCTAGCCGCTTGCCTACAAAGATGAGACTCTGCTGGTCAGTGGGGGATGCCTTCTTTATC 5021515 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| |||||| || || | |||| | | || || |||| | ||| || Sbjct 5021514 CTGGATCTTGGCCTTCACATTTTGGAGGATGTCACTGGGCTCCACCTCCAGGGAGATGGT 5021455 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 ||| || | || ||||||| || ||||| |||||| Sbjct 5021454 CTTGCCGGGCAGGGTTTTCAGGAAGATTTG---CATTTT 5021419 >seq7446 Length=17224310 Score = 95.1 bits (104), Expect = 3e-14 Identities = 155/220 (70%), Gaps = 5/220 (2%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 ||| || | || || ||||| || || ||||| ||||| ||||||||| | | ||| Sbjct 13346892 TCGCAGGCGCAACACCAGGTGCAGGGTGGACTC---TTGGATGTTGTAGTCTGAGAGAGT 13346948 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | |||||||||||||| || | ||| || || |||||||||||||| || || || Sbjct 13346949 GCGGCCATCTTCCAGCTGTTTGCTGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACC 13347008 Query 199528 TTCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586 || || ||||| ||| || || ||| || | |||||| | | || || || | Sbjct 13347009 CTCCTTGTCTTGAAT-TTTGGCTTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCAA 13347067 Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || |||| ||| || |||||||| || || Sbjct 13347068 GGGTGATGGTTTTGCCCGGGAGGGTCTTCACAAAGATCTG 13347107 >seq673 Length=10811 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/135 (76%), Gaps = 4/135 (3%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||||||| | || ||| ||||||||||| | ||| ||||||| ||||| | ||| Sbjct 6426 TCTCAGGACCACCACGA-AGTGGACTCCTTTTGAATGTTATAGTCAGACAAAGCACATCC 6484 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGAC---GCTGCTGGTCCGGAAAAATTCCTTC 199530 |||||||| ||||| || || ||||| || | || |||||| ||| |||||||||| Sbjct 6485 GTCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTACTACTGGTCAGGAGAAATTCCTTC 6544 Query 199531 TCGCTCCTGAATCTT 199545 ||||| ||||| Sbjct 6545 CTTATCCTGGATCTT 6559 >seq6668 Length=25972781 Score = 87.8 bits (96), Expect = 4e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469 ||| ||||| ||| | || ||||| ||||| | ||| |||||| |||| |||||| | Sbjct 7066684 GAAATCTCAACACATGATGAAGAGTGGACTCTTCTTGAGTGTTGTAATCAGACAAAGTAC 7066625 Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529 |||||||||||| |||| | || ||||| || | |||||||| ||| |||||||| Sbjct 7066624 GTCCATCTTCCAGTTGCTCGACAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTT 7066565 Query 199530 C 199530 | Sbjct 7066564 C 7066564 >seq70 Length=10360153 Score = 87.8 bits (96), Expect = 4e-12 Identities = 103/137 (75%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCA-GCCAAAGTC 199468 |||||| || ||||| || |||| ||||||||||| | || ||||| | | || ||| Sbjct 1262353 GAAGTCCCAACACAAGATGAAGAGCGGACTCCTTTTGAATGT-GTAGTTAAGACAGAGTA 1262295 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||| ||| ||||| || || ||||| || | |||||| || ||| |||||||| Sbjct 1262294 TGTTCATCTTTCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGAAATTCCT 1262235 Query 199529 TCTCGCTCCTGAATCTT 199545 ||| | ||| ||||| Sbjct 1262234 TCTTTATTCTGGATCTT 1262218 >seq1299 Length=15376 Score = 86.0 bits (94), Expect = 1e-11 Identities = 152/215 (71%), Gaps = 9/215 (4%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || |||| || || ||||| || |||| ||||||| | | | ||| | ||||| Sbjct 1938 CAGCACCAGGTTTAGGGTGGACTCTTTCTGGATGTTGTAGCCTGAGAGAGTGCGGCCATC 1879 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCG--GAAAAATTCCTTCTCGC 199534 |||||||| || || || | || |||||||||||||| | | | || ||| || | Sbjct 1878 CTCCAGCTGTTTCCCAGCAAGTATCAGACGCTGCTGGTCAGGTGGGATATCCCTCCTTG- 1820 Query 199535 TCCTGAATCTTTTGC-TTCACGGATTC--GACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || ||||| ||| || || || |||| | |||||| | | || | || | ||| Sbjct 1819 TCTTGAAT-TTTGGCTTTGAC--ATTCTAAATGGTGTCACTGGGCTCAATCTCAAGGGTG 1763 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| |||||||| || |||||||| || || Sbjct 1762 ATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTG 1728 >seq1 Length=22034461 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199430 AGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTT 199489 |||| ||||||||||| | ||||||||||| |||||| | |||||||||||| || || Sbjct 13198460 AGAGGAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACATCCATCTTCCAGTTGTTTA 13198519 Query 199490 CCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 || | ||||| || | ||||| | ||| ||||||||| Sbjct 13198520 CCAGTAAAGATCAGTCTTTGCTGATTAGGAGGAATTCCTTC 13198560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178774583687111